Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav13n-1A0A0G2JEU8 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC12.05□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Gm7367-201ENSMUST00000057611 492 ntBASIC12.05□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC12.05□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC12.05□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC12.05□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Zkscan3-208ENSMUST00000224820 5398 ntBASIC12.05□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC12.05□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC12.04□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Gm45774-201ENSMUST00000211992 2665 ntBASIC12.04□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC12.04□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav13n-1A0A0G2JEU8 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC12.03□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC12.03□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC12.03□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav13n-1A0A0G2JEU8 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Mir1668-201ENSMUST00000184114 107 ntBASIC12.03□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Gm21559-201ENSMUST00000220638 855 ntBASIC12.03□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Gm8587-201ENSMUST00000076538 843 ntBASIC12.03□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms