Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC12.79□□□□□ -0.36
Trav6-4A0A075B6B4 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Trav6-4A0A075B6B4 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6-4A0A075B6B4 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6-4A0A075B6B4 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6-4A0A075B6B4 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6-4A0A075B6B4 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC12.79□□□□□ -0.36
Trav6-4A0A075B6B4 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC12.79□□□□□ -0.36
Trav6-4A0A075B6B4 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-4A0A075B6B4 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-4A0A075B6B4 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-4A0A075B6B4 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-4A0A075B6B4 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-4A0A075B6B4 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-4A0A075B6B4 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC12.78□□□□□ -0.36
Trav6-4A0A075B6B4 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC12.78□□□□□ -0.36
Trav6-4A0A075B6B4 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-4A0A075B6B4 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC12.78□□□□□ -0.36
Trav6-4A0A075B6B4 Gm13186-201ENSMUST00000118031 316 ntBASIC12.78□□□□□ -0.36
Trav6-4A0A075B6B4 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Trav6-4A0A075B6B4 Gm26039-201ENSMUST00000158152 144 ntBASIC12.78□□□□□ -0.36
Trav6-4A0A075B6B4 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC12.78□□□□□ -0.36
Trav6-4A0A075B6B4 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-4A0A075B6B4 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-4A0A075B6B4 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-4A0A075B6B4 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-4A0A075B6B4 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-4A0A075B6B4 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-4A0A075B6B4 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Trav6-4A0A075B6B4 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-4A0A075B6B4 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-4A0A075B6B4 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC12.78□□□□□ -0.36
Trav6-4A0A075B6B4 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-4A0A075B6B4 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav6-4A0A075B6B4 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav6-4A0A075B6B4 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav6-4A0A075B6B4 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Trav6-4A0A075B6B4 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav6-4A0A075B6B4 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav6-4A0A075B6B4 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav6-4A0A075B6B4 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6-4A0A075B6B4 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC12.77□□□□□ -0.37
Trav6-4A0A075B6B4 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6-4A0A075B6B4 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC12.77□□□□□ -0.37
Trav6-4A0A075B6B4 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC12.77□□□□□ -0.37
Trav6-4A0A075B6B4 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC12.77□□□□□ -0.37
Trav6-4A0A075B6B4 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC12.77□□□□□ -0.37
Trav6-4A0A075B6B4 AC121577.1-201ENSMUST00000227302 707 ntBASIC12.77□□□□□ -0.37
Trav6-4A0A075B6B4 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6-4A0A075B6B4 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6-4A0A075B6B4 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6-4A0A075B6B4 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6-4A0A075B6B4 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6-4A0A075B6B4 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6-4A0A075B6B4 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6-4A0A075B6B4 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC12.77□□□□□ -0.37
Trav6-4A0A075B6B4 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6-4A0A075B6B4 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6-4A0A075B6B4 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6-4A0A075B6B4 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Trav6-4A0A075B6B4 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6-4A0A075B6B4 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Trav6-4A0A075B6B4 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6-4A0A075B6B4 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6-4A0A075B6B4 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6-4A0A075B6B4 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6-4A0A075B6B4 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6-4A0A075B6B4 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6-4A0A075B6B4 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Trav6-4A0A075B6B4 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6-4A0A075B6B4 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Trav6-4A0A075B6B4 Gm10013-201ENSMUST00000106074 672 ntBASIC12.76□□□□□ -0.37
Trav6-4A0A075B6B4 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Trav6-4A0A075B6B4 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6-4A0A075B6B4 Gm10231-201ENSMUST00000181584 441 ntBASIC12.76□□□□□ -0.37
Trav6-4A0A075B6B4 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6-4A0A075B6B4 Gm10175-202ENSMUST00000208752 441 ntBASIC12.76□□□□□ -0.37
Trav6-4A0A075B6B4 AC122351.1-201ENSMUST00000220467 126 ntBASIC12.76□□□□□ -0.37
Trav6-4A0A075B6B4 Gm18115-201ENSMUST00000221209 621 ntBASIC12.76□□□□□ -0.37
Trav6-4A0A075B6B4 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Trav6-4A0A075B6B4 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6-4A0A075B6B4 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6-4A0A075B6B4 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Trav6-4A0A075B6B4 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6-4A0A075B6B4 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6-4A0A075B6B4 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6-4A0A075B6B4 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6-4A0A075B6B4 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6-4A0A075B6B4 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6-4A0A075B6B4 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6-4A0A075B6B4 Phf7-203ENSMUST00000226565 1971 ntBASIC12.76□□□□□ -0.37
Trav6-4A0A075B6B4 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Trav6-4A0A075B6B4 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6-4A0A075B6B4 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6-4A0A075B6B4 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6-4A0A075B6B4 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Trav6-4A0A075B6B4 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6-4A0A075B6B4 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6-4A0A075B6B4 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6-4A0A075B6B4 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms