Protein–RNA interactions for Protein: A0A075B6A4

Trav12d-3, T cell receptor alpha variable 12D-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-3A0A075B6A4 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav12d-3A0A075B6A4 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav12d-3A0A075B6A4 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC12.45□□□□□ -0.42
Trav12d-3A0A075B6A4 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Trav12d-3A0A075B6A4 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav12d-3A0A075B6A4 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav12d-3A0A075B6A4 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Trav12d-3A0A075B6A4 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav12d-3A0A075B6A4 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav12d-3A0A075B6A4 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav12d-3A0A075B6A4 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav12d-3A0A075B6A4 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav12d-3A0A075B6A4 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav12d-3A0A075B6A4 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav12d-3A0A075B6A4 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav12d-3A0A075B6A4 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav12d-3A0A075B6A4 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav12d-3A0A075B6A4 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav12d-3A0A075B6A4 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
Trav12d-3A0A075B6A4 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Trav12d-3A0A075B6A4 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav12d-3A0A075B6A4 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav12d-3A0A075B6A4 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav12d-3A0A075B6A4 Gm38285-201ENSMUST00000192928 922 ntBASIC12.44□□□□□ -0.42
Trav12d-3A0A075B6A4 Gm9959-201ENSMUST00000068277 390 ntBASIC12.44□□□□□ -0.42
Trav12d-3A0A075B6A4 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav12d-3A0A075B6A4 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav12d-3A0A075B6A4 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav12d-3A0A075B6A4 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav12d-3A0A075B6A4 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav12d-3A0A075B6A4 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav12d-3A0A075B6A4 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Trav12d-3A0A075B6A4 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav12d-3A0A075B6A4 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav12d-3A0A075B6A4 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav12d-3A0A075B6A4 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav12d-3A0A075B6A4 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Trav12d-3A0A075B6A4 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav12d-3A0A075B6A4 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC12.43□□□□□ -0.42
Trav12d-3A0A075B6A4 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav12d-3A0A075B6A4 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav12d-3A0A075B6A4 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav12d-3A0A075B6A4 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav12d-3A0A075B6A4 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Trav12d-3A0A075B6A4 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav12d-3A0A075B6A4 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC12.43□□□□□ -0.42
Trav12d-3A0A075B6A4 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Trav12d-3A0A075B6A4 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
Trav12d-3A0A075B6A4 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav12d-3A0A075B6A4 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC12.43□□□□□ -0.42
Trav12d-3A0A075B6A4 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav12d-3A0A075B6A4 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav12d-3A0A075B6A4 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Trav12d-3A0A075B6A4 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Trav12d-3A0A075B6A4 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav12d-3A0A075B6A4 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav12d-3A0A075B6A4 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav12d-3A0A075B6A4 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC12.43□□□□□ -0.42
Trav12d-3A0A075B6A4 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav12d-3A0A075B6A4 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav12d-3A0A075B6A4 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav12d-3A0A075B6A4 App-207ENSMUST00000227737 2827 ntBASIC12.43□□□□□ -0.42
Trav12d-3A0A075B6A4 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav12d-3A0A075B6A4 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav12d-3A0A075B6A4 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav12d-3A0A075B6A4 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav12d-3A0A075B6A4 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav12d-3A0A075B6A4 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav12d-3A0A075B6A4 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav12d-3A0A075B6A4 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav12d-3A0A075B6A4 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Trav12d-3A0A075B6A4 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav12d-3A0A075B6A4 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav12d-3A0A075B6A4 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav12d-3A0A075B6A4 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav12d-3A0A075B6A4 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav12d-3A0A075B6A4 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav12d-3A0A075B6A4 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC12.42□□□□□ -0.42
Trav12d-3A0A075B6A4 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav12d-3A0A075B6A4 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC12.42□□□□□ -0.42
Trav12d-3A0A075B6A4 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Trav12d-3A0A075B6A4 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav12d-3A0A075B6A4 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav12d-3A0A075B6A4 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC12.42□□□□□ -0.42
Trav12d-3A0A075B6A4 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav12d-3A0A075B6A4 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Trav12d-3A0A075B6A4 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav12d-3A0A075B6A4 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav12d-3A0A075B6A4 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav12d-3A0A075B6A4 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Trav12d-3A0A075B6A4 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC12.42□□□□□ -0.42
Trav12d-3A0A075B6A4 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav12d-3A0A075B6A4 Gm42901-201ENSMUST00000197735 3171 ntBASIC12.42□□□□□ -0.42
Trav12d-3A0A075B6A4 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC12.42□□□□□ -0.42
Trav12d-3A0A075B6A4 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav12d-3A0A075B6A4 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav12d-3A0A075B6A4 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav12d-3A0A075B6A4 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav12d-3A0A075B6A4 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav12d-3A0A075B6A4 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 12.3 ms