Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav3-4A0A075B654 Gm26971-201ENSMUST00000182423 1072 ntBASIC11.22□□□□□ -0.61
Trav3-4A0A075B654 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC11.22□□□□□ -0.61
Trav3-4A0A075B654 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav3-4A0A075B654 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trav3-4A0A075B654 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav3-4A0A075B654 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav3-4A0A075B654 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav3-4A0A075B654 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav3-4A0A075B654 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav3-4A0A075B654 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav3-4A0A075B654 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav3-4A0A075B654 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav3-4A0A075B654 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav3-4A0A075B654 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav3-4A0A075B654 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav3-4A0A075B654 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav3-4A0A075B654 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav3-4A0A075B654 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC11.21□□□□□ -0.61
Trav3-4A0A075B654 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav3-4A0A075B654 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav3-4A0A075B654 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav3-4A0A075B654 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav3-4A0A075B654 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav3-4A0A075B654 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Trav3-4A0A075B654 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav3-4A0A075B654 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC11.21□□□□□ -0.61
Trav3-4A0A075B654 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC11.21□□□□□ -0.61
Trav3-4A0A075B654 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav3-4A0A075B654 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav3-4A0A075B654 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav3-4A0A075B654 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC11.21□□□□□ -0.61
Trav3-4A0A075B654 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav3-4A0A075B654 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav3-4A0A075B654 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trav3-4A0A075B654 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav3-4A0A075B654 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav3-4A0A075B654 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav3-4A0A075B654 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC11.21□□□□□ -0.61
Trav3-4A0A075B654 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC11.21□□□□□ -0.61
Trav3-4A0A075B654 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC11.21□□□□□ -0.61
Trav3-4A0A075B654 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Trav3-4A0A075B654 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC11.21□□□□□ -0.61
Trav3-4A0A075B654 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav3-4A0A075B654 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav3-4A0A075B654 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Trav3-4A0A075B654 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC11.21□□□□□ -0.61
Trav3-4A0A075B654 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav3-4A0A075B654 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav3-4A0A075B654 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC11.21□□□□□ -0.62
Trav3-4A0A075B654 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC11.21□□□□□ -0.62
Trav3-4A0A075B654 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav3-4A0A075B654 Gm10676-201ENSMUST00000098778 3221 ntBASIC11.21□□□□□ -0.62
Trav3-4A0A075B654 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav3-4A0A075B654 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
Trav3-4A0A075B654 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav3-4A0A075B654 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav3-4A0A075B654 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav3-4A0A075B654 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav3-4A0A075B654 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav3-4A0A075B654 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav3-4A0A075B654 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav3-4A0A075B654 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trav3-4A0A075B654 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav3-4A0A075B654 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav3-4A0A075B654 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav3-4A0A075B654 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav3-4A0A075B654 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC11.2□□□□□ -0.62
Trav3-4A0A075B654 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trav3-4A0A075B654 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Trav3-4A0A075B654 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav3-4A0A075B654 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav3-4A0A075B654 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav3-4A0A075B654 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav3-4A0A075B654 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav3-4A0A075B654 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trav3-4A0A075B654 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav3-4A0A075B654 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
Trav3-4A0A075B654 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav3-4A0A075B654 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Trav3-4A0A075B654 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav3-4A0A075B654 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav3-4A0A075B654 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav3-4A0A075B654 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav3-4A0A075B654 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav3-4A0A075B654 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Trav3-4A0A075B654 Phf7-203ENSMUST00000226565 1971 ntBASIC11.19□□□□□ -0.62
Trav3-4A0A075B654 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Trav3-4A0A075B654 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav3-4A0A075B654 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC11.19□□□□□ -0.62
Trav3-4A0A075B654 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC11.19□□□□□ -0.62
Trav3-4A0A075B654 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav3-4A0A075B654 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC11.19□□□□□ -0.62
Trav3-4A0A075B654 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trav3-4A0A075B654 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC11.19□□□□□ -0.62
Trav3-4A0A075B654 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav3-4A0A075B654 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trav3-4A0A075B654 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trav3-4A0A075B654 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Trav3-4A0A075B654 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms