Protein–RNA interactions for Protein: A0A075B649

Trav13-2, T cell receptor alpha variable 13-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-2A0A075B649 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav13-2A0A075B649 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Trav13-2A0A075B649 Gm42569-201ENSMUST00000200539 472 ntBASIC11.2□□□□□ -0.62
Trav13-2A0A075B649 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Trav13-2A0A075B649 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav13-2A0A075B649 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trav13-2A0A075B649 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav13-2A0A075B649 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav13-2A0A075B649 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC11.2□□□□□ -0.62
Trav13-2A0A075B649 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav13-2A0A075B649 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav13-2A0A075B649 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav13-2A0A075B649 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC11.2□□□□□ -0.62
Trav13-2A0A075B649 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trav13-2A0A075B649 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Trav13-2A0A075B649 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav13-2A0A075B649 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav13-2A0A075B649 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trav13-2A0A075B649 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trav13-2A0A075B649 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav13-2A0A075B649 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav13-2A0A075B649 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Trav13-2A0A075B649 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav13-2A0A075B649 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13-2A0A075B649 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13-2A0A075B649 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Trav13-2A0A075B649 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC11.19□□□□□ -0.62
Trav13-2A0A075B649 Gm37437-201ENSMUST00000194451 1937 ntBASIC11.19□□□□□ -0.62
Trav13-2A0A075B649 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Trav13-2A0A075B649 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13-2A0A075B649 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13-2A0A075B649 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13-2A0A075B649 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Trav13-2A0A075B649 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13-2A0A075B649 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13-2A0A075B649 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13-2A0A075B649 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13-2A0A075B649 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13-2A0A075B649 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC11.19□□□□□ -0.62
Trav13-2A0A075B649 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC11.19□□□□□ -0.62
Trav13-2A0A075B649 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13-2A0A075B649 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13-2A0A075B649 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13-2A0A075B649 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13-2A0A075B649 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC11.19□□□□□ -0.62
Trav13-2A0A075B649 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13-2A0A075B649 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Trav13-2A0A075B649 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC11.19□□□□□ -0.62
Trav13-2A0A075B649 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13-2A0A075B649 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13-2A0A075B649 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13-2A0A075B649 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13-2A0A075B649 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13-2A0A075B649 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13-2A0A075B649 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13-2A0A075B649 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13-2A0A075B649 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13-2A0A075B649 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trav13-2A0A075B649 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav13-2A0A075B649 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trav13-2A0A075B649 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC11.18□□□□□ -0.62
Trav13-2A0A075B649 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav13-2A0A075B649 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav13-2A0A075B649 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav13-2A0A075B649 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC11.18□□□□□ -0.62
Trav13-2A0A075B649 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC11.18□□□□□ -0.62
Trav13-2A0A075B649 Dancr-204ENSMUST00000132389 2347 ntBASIC11.18□□□□□ -0.62
Trav13-2A0A075B649 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav13-2A0A075B649 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Trav13-2A0A075B649 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav13-2A0A075B649 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
Trav13-2A0A075B649 Gm6576-201ENSMUST00000169678 883 ntBASIC11.18□□□□□ -0.62
Trav13-2A0A075B649 Gm26571-201ENSMUST00000181399 666 ntBASIC11.18□□□□□ -0.62
Trav13-2A0A075B649 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trav13-2A0A075B649 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC11.18□□□□□ -0.62
Trav13-2A0A075B649 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav13-2A0A075B649 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC11.18□□□□□ -0.62
Trav13-2A0A075B649 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC11.18□□□□□ -0.62
Trav13-2A0A075B649 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC11.18□□□□□ -0.62
Trav13-2A0A075B649 Rab3c-203ENSMUST00000224180 967 ntBASIC11.18□□□□□ -0.62
Trav13-2A0A075B649 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
Trav13-2A0A075B649 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav13-2A0A075B649 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav13-2A0A075B649 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav13-2A0A075B649 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav13-2A0A075B649 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav13-2A0A075B649 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trav13-2A0A075B649 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC11.18□□□□□ -0.62
Trav13-2A0A075B649 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav13-2A0A075B649 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav13-2A0A075B649 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav13-2A0A075B649 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav13-2A0A075B649 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav13-2A0A075B649 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav13-2A0A075B649 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav13-2A0A075B649 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav13-2A0A075B649 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav13-2A0A075B649 Gm10654-201ENSMUST00000098653 1633 ntBASIC11.17□□□□□ -0.62
Trav13-2A0A075B649 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav13-2A0A075B649 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms