Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav8n-2A0A075B633 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Trav8n-2A0A075B633 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav8n-2A0A075B633 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC15.18■□□□□ 0.02
Trav8n-2A0A075B633 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav8n-2A0A075B633 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC15.18■□□□□ 0.02
Trav8n-2A0A075B633 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav8n-2A0A075B633 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC15.18■□□□□ 0.02
Trav8n-2A0A075B633 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
Trav8n-2A0A075B633 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav8n-2A0A075B633 AC114585.2-202ENSMUST00000228094 426 ntBASIC15.18■□□□□ 0.02
Trav8n-2A0A075B633 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav8n-2A0A075B633 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Trav8n-2A0A075B633 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav8n-2A0A075B633 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav8n-2A0A075B633 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav8n-2A0A075B633 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav8n-2A0A075B633 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav8n-2A0A075B633 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav8n-2A0A075B633 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav8n-2A0A075B633 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav8n-2A0A075B633 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav8n-2A0A075B633 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav8n-2A0A075B633 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav8n-2A0A075B633 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav8n-2A0A075B633 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav8n-2A0A075B633 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav8n-2A0A075B633 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav8n-2A0A075B633 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav8n-2A0A075B633 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Trav8n-2A0A075B633 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav8n-2A0A075B633 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav8n-2A0A075B633 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC15.17■□□□□ 0.02
Trav8n-2A0A075B633 Gm8969-201ENSMUST00000199694 526 ntBASIC15.17■□□□□ 0.02
Trav8n-2A0A075B633 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav8n-2A0A075B633 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav8n-2A0A075B633 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav8n-2A0A075B633 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav8n-2A0A075B633 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav8n-2A0A075B633 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav8n-2A0A075B633 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Trav8n-2A0A075B633 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav8n-2A0A075B633 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav8n-2A0A075B633 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav8n-2A0A075B633 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav8n-2A0A075B633 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav8n-2A0A075B633 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav8n-2A0A075B633 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav8n-2A0A075B633 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Trav8n-2A0A075B633 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Trav8n-2A0A075B633 Gm12350-201ENSMUST00000121208 462 ntBASIC15.16■□□□□ 0.02
Trav8n-2A0A075B633 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav8n-2A0A075B633 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav8n-2A0A075B633 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav8n-2A0A075B633 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav8n-2A0A075B633 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav8n-2A0A075B633 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav8n-2A0A075B633 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav8n-2A0A075B633 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav8n-2A0A075B633 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav8n-2A0A075B633 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav8n-2A0A075B633 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav8n-2A0A075B633 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav8n-2A0A075B633 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav8n-2A0A075B633 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC15.15■□□□□ 0.02
Trav8n-2A0A075B633 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav8n-2A0A075B633 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav8n-2A0A075B633 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav8n-2A0A075B633 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav8n-2A0A075B633 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav8n-2A0A075B633 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav8n-2A0A075B633 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC15.15■□□□□ 0.02
Trav8n-2A0A075B633 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav8n-2A0A075B633 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC15.15■□□□□ 0.02
Trav8n-2A0A075B633 Gm25745-201ENSMUST00000174945 133 ntBASIC15.15■□□□□ 0.02
Trav8n-2A0A075B633 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav8n-2A0A075B633 AC127349.1-201ENSMUST00000224590 266 ntBASIC15.15■□□□□ 0.02
Trav8n-2A0A075B633 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC15.15■□□□□ 0.02
Trav8n-2A0A075B633 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav8n-2A0A075B633 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC15.15■□□□□ 0.02
Trav8n-2A0A075B633 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav8n-2A0A075B633 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav8n-2A0A075B633 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav8n-2A0A075B633 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav8n-2A0A075B633 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav8n-2A0A075B633 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav8n-2A0A075B633 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav8n-2A0A075B633 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Trav8n-2A0A075B633 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC15.14■□□□□ 0.01
Trav8n-2A0A075B633 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav8n-2A0A075B633 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Trav8n-2A0A075B633 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav8n-2A0A075B633 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav8n-2A0A075B633 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav8n-2A0A075B633 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav8n-2A0A075B633 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav8n-2A0A075B633 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Trav8n-2A0A075B633 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC15.14■□□□□ 0.01
Trav8n-2A0A075B633 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav8n-2A0A075B633 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms