Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
PCDH9Q9HC56 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.73□□□□□ -1.65
PCDH9Q9HC56 MAPK10-349ENST00000641767 3661 ntBASIC4.73□□□□□ -1.65
PCDH9Q9HC56 AL391684.1-202ENST00000641293 1636 ntBASIC4.73□□□□□ -1.65
PCDH9Q9HC56 AL590240.1-201ENST00000334118 313 ntBASIC4.73□□□□□ -1.65
PCDH9Q9HC56 U6.112-201ENST00000384129 70 ntBASIC4.73□□□□□ -1.65
PCDH9Q9HC56 ANAPC10P1-201ENST00000395991 556 ntBASIC4.73□□□□□ -1.65
PCDH9Q9HC56 ZNF602P-201ENST00000405929 924 ntBASIC4.73□□□□□ -1.65
PCDH9Q9HC56 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC4.73□□□□□ -1.65
PCDH9Q9HC56 RBMY2KP-201ENST00000418221 992 ntBASIC4.73□□□□□ -1.65
PCDH9Q9HC56 AC140479.3-201ENST00000418944 1126 ntBASIC4.73□□□□□ -1.65
PCDH9Q9HC56 MTCO3P4-201ENST00000419236 787 ntBASIC4.73□□□□□ -1.65
PCDH9Q9HC56 TEX41-203ENST00000420472 765 ntTSL 3 BASIC4.73□□□□□ -1.65
PCDH9Q9HC56 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.73□□□□□ -1.65
PCDH9Q9HC56 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC4.73□□□□□ -1.65
PCDH9Q9HC56 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.73□□□□□ -1.65
PCDH9Q9HC56 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.73□□□□□ -1.65
PCDH9Q9HC56 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC4.73□□□□□ -1.65
PCDH9Q9HC56 AC098826.2-201ENST00000452011 651 ntBASIC4.73□□□□□ -1.65
PCDH9Q9HC56 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC4.73□□□□□ -1.65
PCDH9Q9HC56 ISCUP1-201ENST00000454451 448 ntBASIC4.73□□□□□ -1.65
PCDH9Q9HC56 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.73□□□□□ -1.65
PCDH9Q9HC56 IGLV2-34-201ENST00000490007 283 ntBASIC4.73□□□□□ -1.65
PCDH9Q9HC56 UBA52P3-201ENST00000491303 382 ntBASIC4.73□□□□□ -1.65
PCDH9Q9HC56 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
PCDH9Q9HC56 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC4.73□□□□□ -1.65
PCDH9Q9HC56 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.73□□□□□ -1.65
PCDH9Q9HC56 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.73□□□□□ -1.65
PCDH9Q9HC56 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
PCDH9Q9HC56 IGKV1-32-201ENST00000519290 311 ntBASIC4.73□□□□□ -1.65
PCDH9Q9HC56 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.73□□□□□ -1.65
PCDH9Q9HC56 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.73□□□□□ -1.65
PCDH9Q9HC56 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.73□□□□□ -1.65
PCDH9Q9HC56 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.73□□□□□ -1.65
PCDH9Q9HC56 RPP40P2-201ENST00000603596 712 ntBASIC4.73□□□□□ -1.65
PCDH9Q9HC56 AC018618.2-201ENST00000604770 446 ntBASIC4.73□□□□□ -1.65
PCDH9Q9HC56 AC093673.2-201ENST00000609674 331 ntBASIC4.73□□□□□ -1.65
PCDH9Q9HC56 AC100827.5-201ENST00000615883 426 ntBASIC4.73□□□□□ -1.65
PCDH9Q9HC56 AC009704.2-201ENST00000618739 483 ntBASIC4.73□□□□□ -1.65
PCDH9Q9HC56 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC4.73□□□□□ -1.65
PCDH9Q9HC56 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
PCDH9Q9HC56 AC010435.1-201ENST00000623353 1177 ntBASIC4.73□□□□□ -1.65
PCDH9Q9HC56 AC097655.1-201ENST00000635075 318 ntBASIC4.73□□□□□ -1.65
PCDH9Q9HC56 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
PCDH9Q9HC56 AC017104.4-201ENST00000636283 1592 ntBASIC4.73□□□□□ -1.65
PCDH9Q9HC56 AL132640.2-201ENST00000559968 1698 ntBASIC4.73□□□□□ -1.65
PCDH9Q9HC56 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.73□□□□□ -1.65
PCDH9Q9HC56 SPATA2P1-201ENST00000431223 2055 ntBASIC4.73□□□□□ -1.65
PCDH9Q9HC56 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.72□□□□□ -1.65
PCDH9Q9HC56 AC010928.1-201ENST00000592477 1447 ntBASIC4.72□□□□□ -1.65
PCDH9Q9HC56 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PCDH9Q9HC56 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PCDH9Q9HC56 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PCDH9Q9HC56 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
PCDH9Q9HC56 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PCDH9Q9HC56 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.72□□□□□ -1.65
PCDH9Q9HC56 RNU5B-1-201ENST00000363286 116 ntBASIC4.72□□□□□ -1.65
PCDH9Q9HC56 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC4.72□□□□□ -1.65
PCDH9Q9HC56 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
PCDH9Q9HC56 MIR298-201ENST00000401212 88 ntBASIC4.72□□□□□ -1.65
PCDH9Q9HC56 FCF1P5-201ENST00000406490 482 ntBASIC4.72□□□□□ -1.65
PCDH9Q9HC56 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PCDH9Q9HC56 ZNF736P7Y-201ENST00000425158 820 ntBASIC4.72□□□□□ -1.65
PCDH9Q9HC56 RPL23AP4-201ENST00000427757 463 ntBASIC4.72□□□□□ -1.65
PCDH9Q9HC56 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.72□□□□□ -1.65
PCDH9Q9HC56 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC4.72□□□□□ -1.65
PCDH9Q9HC56 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC4.72□□□□□ -1.65
PCDH9Q9HC56 TPTE2P3-201ENST00000441562 1189 ntBASIC4.72□□□□□ -1.65
PCDH9Q9HC56 RPL36AP15-201ENST00000444514 266 ntBASIC4.72□□□□□ -1.65
PCDH9Q9HC56 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC4.72□□□□□ -1.65
PCDH9Q9HC56 AC243772.1-201ENST00000451620 410 ntBASIC4.72□□□□□ -1.65
PCDH9Q9HC56 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.72□□□□□ -1.65
PCDH9Q9HC56 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC4.72□□□□□ -1.65
PCDH9Q9HC56 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.72□□□□□ -1.65
PCDH9Q9HC56 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PCDH9Q9HC56 AC006967.1-201ENST00000467608 589 ntBASIC4.72□□□□□ -1.65
PCDH9Q9HC56 AC022795.1-201ENST00000473808 480 ntBASIC4.72□□□□□ -1.65
PCDH9Q9HC56 AC012158.1-204ENST00000483430 465 ntBASIC4.72□□□□□ -1.65
PCDH9Q9HC56 AC093720.1-201ENST00000505681 714 ntBASIC4.72□□□□□ -1.65
PCDH9Q9HC56 STMN1P2-201ENST00000508435 439 ntBASIC4.72□□□□□ -1.65
PCDH9Q9HC56 Y_RNA.717-201ENST00000517106 92 ntBASIC4.72□□□□□ -1.65
PCDH9Q9HC56 AF186190.1-201ENST00000517470 480 ntBASIC4.72□□□□□ -1.65
PCDH9Q9HC56 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.72□□□□□ -1.65
PCDH9Q9HC56 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PCDH9Q9HC56 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC4.72□□□□□ -1.65
PCDH9Q9HC56 ZNF971P-201ENST00000562068 1249 ntBASIC4.72□□□□□ -1.65
PCDH9Q9HC56 MIR4270-201ENST00000581799 70 ntBASIC4.72□□□□□ -1.65
PCDH9Q9HC56 AC008759.1-201ENST00000589783 983 ntBASIC4.72□□□□□ -1.65
PCDH9Q9HC56 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.72□□□□□ -1.65
PCDH9Q9HC56 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.72□□□□□ -1.65
PCDH9Q9HC56 AC068313.1-201ENST00000604028 1008 ntBASIC4.72□□□□□ -1.65
PCDH9Q9HC56 AP002360.3-201ENST00000607673 710 ntBASIC4.72□□□□□ -1.65
PCDH9Q9HC56 AL353600.1-201ENST00000608148 251 ntBASIC4.72□□□□□ -1.65
PCDH9Q9HC56 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
PCDH9Q9HC56 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.72□□□□□ -1.65
PCDH9Q9HC56 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC4.72□□□□□ -1.65
PCDH9Q9HC56 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
PCDH9Q9HC56 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PCDH9Q9HC56 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.72□□□□□ -1.65
PCDH9Q9HC56 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 130.2 ms