Protein–RNA interactions for Protein: Q9H9C1

VIPAS39, Spermatogenesis-defective protein 39 homolog, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39Q9H9C1 RNU6-347P-201ENST00000516658 105 ntBASIC4.38□□□□□ -1.71
VIPAS39Q9H9C1 IGKV2-18-201ENST00000522607 343 ntBASIC4.38□□□□□ -1.71
VIPAS39Q9H9C1 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.38□□□□□ -1.71
VIPAS39Q9H9C1 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC4.38□□□□□ -1.71
VIPAS39Q9H9C1 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.38□□□□□ -1.71
VIPAS39Q9H9C1 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.38□□□□□ -1.71
VIPAS39Q9H9C1 AC063950.1-201ENST00000552036 308 ntBASIC4.38□□□□□ -1.71
VIPAS39Q9H9C1 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.38□□□□□ -1.71
VIPAS39Q9H9C1 MTND4LP25-201ENST00000570218 163 ntBASIC4.38□□□□□ -1.71
VIPAS39Q9H9C1 AC012146.2-201ENST00000576545 416 ntBASIC4.38□□□□□ -1.71
VIPAS39Q9H9C1 MIR548Y-201ENST00000582739 110 ntBASIC4.38□□□□□ -1.71
VIPAS39Q9H9C1 AC098483.2-201ENST00000603158 454 ntBASIC4.38□□□□□ -1.71
VIPAS39Q9H9C1 AC110741.2-201ENST00000605278 268 ntBASIC4.38□□□□□ -1.71
VIPAS39Q9H9C1 AC084824.5-201ENST00000612009 413 ntBASIC4.38□□□□□ -1.71
VIPAS39Q9H9C1 AL163051.2-201ENST00000618976 735 ntBASIC4.38□□□□□ -1.71
VIPAS39Q9H9C1 AC097372.4-201ENST00000625025 466 ntBASIC4.38□□□□□ -1.71
VIPAS39Q9H9C1 MIR4302-201ENST00000638058 60 ntBASIC4.38□□□□□ -1.71
VIPAS39Q9H9C1 LINC00561-201ENST00000565815 2738 ntBASIC4.38□□□□□ -1.71
VIPAS39Q9H9C1 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
VIPAS39Q9H9C1 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.38□□□□□ -1.71
VIPAS39Q9H9C1 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
VIPAS39Q9H9C1 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.38□□□□□ -1.71
VIPAS39Q9H9C1 HSPD1P11-201ENST00000508643 1702 ntBASIC4.38□□□□□ -1.71
VIPAS39Q9H9C1 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
VIPAS39Q9H9C1 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
VIPAS39Q9H9C1 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
VIPAS39Q9H9C1 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
VIPAS39Q9H9C1 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.37□□□□□ -1.71
VIPAS39Q9H9C1 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
VIPAS39Q9H9C1 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.37□□□□□ -1.71
VIPAS39Q9H9C1 RNU1-18P-201ENST00000363062 164 ntBASIC4.37□□□□□ -1.71
VIPAS39Q9H9C1 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
VIPAS39Q9H9C1 RNU6-185P-201ENST00000384421 107 ntBASIC4.37□□□□□ -1.71
VIPAS39Q9H9C1 MIR3065-201ENST00000390137 79 ntBASIC4.37□□□□□ -1.71
VIPAS39Q9H9C1 U3.25-201ENST00000391209 220 ntBASIC4.37□□□□□ -1.71
VIPAS39Q9H9C1 MIR1179-201ENST00000408703 91 ntBASIC4.37□□□□□ -1.71
VIPAS39Q9H9C1 RNU4-27P-201ENST00000410889 139 ntBASIC4.37□□□□□ -1.71
VIPAS39Q9H9C1 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC4.37□□□□□ -1.71
VIPAS39Q9H9C1 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.37□□□□□ -1.71
VIPAS39Q9H9C1 AL035458.1-201ENST00000433096 585 ntBASIC4.37□□□□□ -1.71
VIPAS39Q9H9C1 AL132765.1-201ENST00000434165 553 ntBASIC4.37□□□□□ -1.71
VIPAS39Q9H9C1 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC4.37□□□□□ -1.71
VIPAS39Q9H9C1 RPS26P40-201ENST00000435209 294 ntBASIC4.37□□□□□ -1.71
VIPAS39Q9H9C1 AC016831.4-201ENST00000438302 307 ntBASIC4.37□□□□□ -1.71
VIPAS39Q9H9C1 AL391987.1-201ENST00000441025 200 ntBASIC4.37□□□□□ -1.71
VIPAS39Q9H9C1 AL357520.1-201ENST00000441557 453 ntBASIC4.37□□□□□ -1.71
VIPAS39Q9H9C1 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.37□□□□□ -1.71
VIPAS39Q9H9C1 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.37□□□□□ -1.71
VIPAS39Q9H9C1 RPL34P26-201ENST00000445636 354 ntBASIC4.37□□□□□ -1.71
VIPAS39Q9H9C1 AC069540.1-201ENST00000446320 988 ntBASIC4.37□□□□□ -1.71
VIPAS39Q9H9C1 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.37□□□□□ -1.71
VIPAS39Q9H9C1 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC4.37□□□□□ -1.71
VIPAS39Q9H9C1 APOOP2-201ENST00000461561 539 ntBASIC4.37□□□□□ -1.71
VIPAS39Q9H9C1 RPL7P22-201ENST00000466005 733 ntBASIC4.37□□□□□ -1.71
VIPAS39Q9H9C1 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC4.37□□□□□ -1.71
VIPAS39Q9H9C1 AC078857.1-201ENST00000469870 667 ntBASIC4.37□□□□□ -1.71
VIPAS39Q9H9C1 AC106872.2-201ENST00000494303 480 ntBASIC4.37□□□□□ -1.71
VIPAS39Q9H9C1 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.37□□□□□ -1.71
VIPAS39Q9H9C1 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.37□□□□□ -1.71
VIPAS39Q9H9C1 HPRT1P2-201ENST00000505250 544 ntBASIC4.37□□□□□ -1.71
VIPAS39Q9H9C1 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.37□□□□□ -1.71
VIPAS39Q9H9C1 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.37□□□□□ -1.71
VIPAS39Q9H9C1 ATP1B1P1-201ENST00000509767 915 ntBASIC4.37□□□□□ -1.71
VIPAS39Q9H9C1 MAL2-205ENST00000521048 575 ntTSL 4 BASIC4.37□□□□□ -1.71
VIPAS39Q9H9C1 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC4.37□□□□□ -1.71
VIPAS39Q9H9C1 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC4.37□□□□□ -1.71
VIPAS39Q9H9C1 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC4.37□□□□□ -1.71
VIPAS39Q9H9C1 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC4.37□□□□□ -1.71
VIPAS39Q9H9C1 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.37□□□□□ -1.71
VIPAS39Q9H9C1 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC4.37□□□□□ -1.71
VIPAS39Q9H9C1 AC090312.1-201ENST00000580637 348 ntBASIC4.37□□□□□ -1.71
VIPAS39Q9H9C1 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC4.37□□□□□ -1.71
VIPAS39Q9H9C1 AC087763.1-201ENST00000603391 286 ntBASIC4.37□□□□□ -1.71
VIPAS39Q9H9C1 AC008115.4-201ENST00000619780 775 ntBASIC4.37□□□□□ -1.71
VIPAS39Q9H9C1 AC007342.8-201ENST00000623278 678 ntBASIC4.37□□□□□ -1.71
VIPAS39Q9H9C1 AC010435.1-201ENST00000623353 1177 ntBASIC4.37□□□□□ -1.71
VIPAS39Q9H9C1 AC106730.3-201ENST00000624568 641 ntBASIC4.37□□□□□ -1.71
VIPAS39Q9H9C1 AL773545.4-201ENST00000637262 310 ntBASIC4.37□□□□□ -1.71
VIPAS39Q9H9C1 CASC19-222ENST00000641321 1173 ntBASIC4.37□□□□□ -1.71
VIPAS39Q9H9C1 AL513478.4-201ENST00000641636 310 ntBASIC4.37□□□□□ -1.71
VIPAS39Q9H9C1 LINC01808-202ENST00000641680 1116 ntBASIC4.37□□□□□ -1.71
VIPAS39Q9H9C1 LINC01739-205ENST00000641890 573 ntBASIC4.37□□□□□ -1.71
VIPAS39Q9H9C1 RPS4XP5-202ENST00000449995 1334 ntBASIC4.37□□□□□ -1.71
VIPAS39Q9H9C1 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
VIPAS39Q9H9C1 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
VIPAS39Q9H9C1 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.36□□□□□ -1.71
VIPAS39Q9H9C1 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
VIPAS39Q9H9C1 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
VIPAS39Q9H9C1 Z98941.1-201ENST00000407764 100 ntBASIC4.36□□□□□ -1.71
VIPAS39Q9H9C1 RNU2-50P-201ENST00000410494 143 ntBASIC4.36□□□□□ -1.71
VIPAS39Q9H9C1 CYP4F29P-201ENST00000420685 446 ntBASIC4.36□□□□□ -1.71
VIPAS39Q9H9C1 CHEK2P5-201ENST00000423877 246 ntBASIC4.36□□□□□ -1.71
VIPAS39Q9H9C1 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.36□□□□□ -1.71
VIPAS39Q9H9C1 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.36□□□□□ -1.71
VIPAS39Q9H9C1 AP001324.1-201ENST00000428553 399 ntBASIC4.36□□□□□ -1.71
VIPAS39Q9H9C1 UBE2V1P6-201ENST00000430840 422 ntBASIC4.36□□□□□ -1.71
VIPAS39Q9H9C1 AC096638.2-201ENST00000434965 711 ntBASIC4.36□□□□□ -1.71
VIPAS39Q9H9C1 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC4.36□□□□□ -1.71
VIPAS39Q9H9C1 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC4.36□□□□□ -1.71
VIPAS39Q9H9C1 RPL7AP6-201ENST00000477943 801 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 125.7 ms