Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 AC092447.7-201ENST00000422212 1621 ntBASIC5.56□□□□□ -1.52
VPS11Q9H270 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
VPS11Q9H270 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
VPS11Q9H270 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
VPS11Q9H270 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
VPS11Q9H270 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.55□□□□□ -1.52
VPS11Q9H270 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
VPS11Q9H270 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.55□□□□□ -1.52
VPS11Q9H270 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
VPS11Q9H270 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
VPS11Q9H270 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
VPS11Q9H270 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.55□□□□□ -1.52
VPS11Q9H270 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
VPS11Q9H270 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
VPS11Q9H270 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.55□□□□□ -1.52
VPS11Q9H270 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
VPS11Q9H270 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
VPS11Q9H270 RN7SKP171-201ENST00000364417 303 ntBASIC5.55□□□□□ -1.52
VPS11Q9H270 RNA5SP30-201ENST00000365552 115 ntBASIC5.55□□□□□ -1.52
VPS11Q9H270 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
VPS11Q9H270 ARL4AP5-201ENST00000404372 599 ntBASIC5.55□□□□□ -1.52
VPS11Q9H270 SNORA11C-201ENST00000408532 129 ntBASIC5.55□□□□□ -1.52
VPS11Q9H270 RNU2-66P-201ENST00000410650 161 ntBASIC5.55□□□□□ -1.52
VPS11Q9H270 GSTM3P2-201ENST00000412746 530 ntBASIC5.55□□□□□ -1.52
VPS11Q9H270 COX5BP7-201ENST00000414780 274 ntBASIC5.55□□□□□ -1.52
VPS11Q9H270 OR51A5P-201ENST00000415429 942 ntBASIC5.55□□□□□ -1.52
VPS11Q9H270 TAF13P2-201ENST00000416876 286 ntBASIC5.55□□□□□ -1.52
VPS11Q9H270 BX323845.3-201ENST00000428215 527 ntBASIC5.55□□□□□ -1.52
VPS11Q9H270 MOB1AP1-201ENST00000430903 535 ntBASIC5.55□□□□□ -1.52
VPS11Q9H270 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC5.55□□□□□ -1.52
VPS11Q9H270 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC5.55□□□□□ -1.52
VPS11Q9H270 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC5.55□□□□□ -1.52
VPS11Q9H270 PPIAP13-201ENST00000434706 478 ntBASIC5.55□□□□□ -1.52
VPS11Q9H270 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC5.55□□□□□ -1.52
VPS11Q9H270 MTND4LP16-201ENST00000440828 295 ntBASIC5.55□□□□□ -1.52
VPS11Q9H270 RPS7P5-201ENST00000441482 581 ntBASIC5.55□□□□□ -1.52
VPS11Q9H270 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC5.55□□□□□ -1.52
VPS11Q9H270 AC005002.1-201ENST00000447458 540 ntBASIC5.55□□□□□ -1.52
VPS11Q9H270 MTND5P20-201ENST00000448677 143 ntBASIC5.55□□□□□ -1.52
VPS11Q9H270 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.55□□□□□ -1.52
VPS11Q9H270 AC090804.1-201ENST00000448870 490 ntBASIC5.55□□□□□ -1.52
VPS11Q9H270 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.55□□□□□ -1.52
VPS11Q9H270 AC244505.3-201ENST00000454598 187 ntBASIC5.55□□□□□ -1.52
VPS11Q9H270 RPL23AP71-201ENST00000470966 469 ntBASIC5.55□□□□□ -1.52
VPS11Q9H270 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.55□□□□□ -1.52
VPS11Q9H270 RPL23AP44-201ENST00000482216 473 ntBASIC5.55□□□□□ -1.52
VPS11Q9H270 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC5.55□□□□□ -1.52
VPS11Q9H270 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.55□□□□□ -1.52
VPS11Q9H270 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC5.55□□□□□ -1.52
VPS11Q9H270 AC025465.4-201ENST00000513422 638 ntBASIC5.55□□□□□ -1.52
VPS11Q9H270 RNU6-507P-201ENST00000516045 100 ntBASIC5.55□□□□□ -1.52
VPS11Q9H270 SCARNA15.1-201ENST00000516384 125 ntBASIC5.55□□□□□ -1.52
VPS11Q9H270 RNA5SP438-201ENST00000516561 112 ntBASIC5.55□□□□□ -1.52
VPS11Q9H270 Y_RNA.702-201ENST00000516843 96 ntBASIC5.55□□□□□ -1.52
VPS11Q9H270 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC5.55□□□□□ -1.52
VPS11Q9H270 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.55□□□□□ -1.52
VPS11Q9H270 AC092709.1-201ENST00000521355 1045 ntBASIC5.55□□□□□ -1.52
VPS11Q9H270 AC084121.1-201ENST00000533882 835 ntBASIC5.55□□□□□ -1.52
VPS11Q9H270 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC5.55□□□□□ -1.52
VPS11Q9H270 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
VPS11Q9H270 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC5.55□□□□□ -1.52
VPS11Q9H270 AC079905.1-201ENST00000549280 475 ntBASIC5.55□□□□□ -1.52
VPS11Q9H270 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC5.55□□□□□ -1.52
VPS11Q9H270 DUXAP1-201ENST00000556632 463 ntBASIC5.55□□□□□ -1.52
VPS11Q9H270 AL845552.1-201ENST00000556820 323 ntBASIC5.55□□□□□ -1.52
VPS11Q9H270 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC5.55□□□□□ -1.52
VPS11Q9H270 CYCSP38-201ENST00000559840 322 ntBASIC5.55□□□□□ -1.52
VPS11Q9H270 AC040958.1-201ENST00000561102 201 ntBASIC5.55□□□□□ -1.52
VPS11Q9H270 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC5.55□□□□□ -1.52
VPS11Q9H270 TPRKBP2-201ENST00000565969 475 ntBASIC5.55□□□□□ -1.52
VPS11Q9H270 AC009852.2-201ENST00000567898 485 ntBASIC5.55□□□□□ -1.52
VPS11Q9H270 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC5.55□□□□□ -1.52
VPS11Q9H270 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC5.55□□□□□ -1.52
VPS11Q9H270 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC5.55□□□□□ -1.52
VPS11Q9H270 AC090616.5-202ENST00000582111 297 ntBASIC5.55□□□□□ -1.52
VPS11Q9H270 FGF7P1-201ENST00000582820 288 ntBASIC5.55□□□□□ -1.52
VPS11Q9H270 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.55□□□□□ -1.52
VPS11Q9H270 H3F3BP2-201ENST00000583907 357 ntBASIC5.55□□□□□ -1.52
VPS11Q9H270 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC5.55□□□□□ -1.52
VPS11Q9H270 AC010200.2-201ENST00000605098 235 ntBASIC5.55□□□□□ -1.52
VPS11Q9H270 AC006270.3-201ENST00000605967 1036 ntBASIC5.55□□□□□ -1.52
VPS11Q9H270 AC009237.15-201ENST00000610252 501 ntBASIC5.55□□□□□ -1.52
VPS11Q9H270 MIR6780B-201ENST00000610307 79 ntBASIC5.55□□□□□ -1.52
VPS11Q9H270 ATE1-AS1-202ENST00000636460 506 ntBASIC5.55□□□□□ -1.52
VPS11Q9H270 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.55□□□□□ -1.52
VPS11Q9H270 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
VPS11Q9H270 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.55□□□□□ -1.52
VPS11Q9H270 AL157700.1-201ENST00000561973 1432 ntBASIC5.55□□□□□ -1.52
VPS11Q9H270 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
VPS11Q9H270 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
VPS11Q9H270 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.55□□□□□ -1.52
VPS11Q9H270 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
VPS11Q9H270 AL138820.1-201ENST00000617901 5305 ntBASIC5.55□□□□□ -1.52
VPS11Q9H270 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
VPS11Q9H270 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
VPS11Q9H270 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.54□□□□□ -1.52
VPS11Q9H270 ADAM5-202ENST00000399789 1942 ntBASIC5.54□□□□□ -1.52
VPS11Q9H270 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
VPS11Q9H270 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.54□□□□□ -1.52
VPS11Q9H270 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 139.7 ms