Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AL589765.3-201ENST00000446084 462 ntBASIC4.88□□□□□ -1.63
SNX18Q96RF0 AL031584.1-201ENST00000447169 754 ntBASIC4.88□□□□□ -1.63
SNX18Q96RF0 AL450023.1-201ENST00000450868 751 ntBASIC4.88□□□□□ -1.63
SNX18Q96RF0 VDAC2P4-201ENST00000452925 711 ntBASIC4.88□□□□□ -1.63
SNX18Q96RF0 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
SNX18Q96RF0 RPS26P39-201ENST00000469206 341 ntBASIC4.88□□□□□ -1.63
SNX18Q96RF0 RPL7P18-201ENST00000478965 734 ntBASIC4.88□□□□□ -1.63
SNX18Q96RF0 AC092045.1-201ENST00000495716 1231 ntBASIC4.88□□□□□ -1.63
SNX18Q96RF0 DYNLL1P6-201ENST00000503440 264 ntBASIC4.88□□□□□ -1.63
SNX18Q96RF0 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC4.88□□□□□ -1.63
SNX18Q96RF0 AC098799.3-201ENST00000506095 438 ntBASIC4.88□□□□□ -1.63
SNX18Q96RF0 MTCO3P7-201ENST00000510008 774 ntBASIC4.88□□□□□ -1.63
SNX18Q96RF0 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC4.88□□□□□ -1.63
SNX18Q96RF0 SNORA43.3-201ENST00000517240 103 ntBASIC4.88□□□□□ -1.63
SNX18Q96RF0 AC105185.1-201ENST00000518705 535 ntBASIC4.88□□□□□ -1.63
SNX18Q96RF0 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC4.88□□□□□ -1.63
SNX18Q96RF0 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC4.88□□□□□ -1.63
SNX18Q96RF0 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC4.88□□□□□ -1.63
SNX18Q96RF0 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SNX18Q96RF0 MTCYBP20-201ENST00000524239 1129 ntBASIC4.88□□□□□ -1.63
SNX18Q96RF0 AP000859.1-201ENST00000525536 307 ntBASIC4.88□□□□□ -1.63
SNX18Q96RF0 OR4C2P-201ENST00000530855 1064 ntBASIC4.88□□□□□ -1.63
SNX18Q96RF0 RFPL1S-203ENST00000539579 330 ntBASIC4.88□□□□□ -1.63
SNX18Q96RF0 AP002373.2-201ENST00000541631 1060 ntBASIC4.88□□□□□ -1.63
SNX18Q96RF0 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC4.88□□□□□ -1.63
SNX18Q96RF0 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.88□□□□□ -1.63
SNX18Q96RF0 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.88□□□□□ -1.63
SNX18Q96RF0 ISCA1P3-201ENST00000577104 373 ntBASIC4.88□□□□□ -1.63
SNX18Q96RF0 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC4.88□□□□□ -1.63
SNX18Q96RF0 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC4.88□□□□□ -1.63
SNX18Q96RF0 VN1R82P-201ENST00000601481 356 ntBASIC4.88□□□□□ -1.63
SNX18Q96RF0 AC108738.1-201ENST00000603703 237 ntBASIC4.88□□□□□ -1.63
SNX18Q96RF0 AP000811.1-201ENST00000603803 651 ntBASIC4.88□□□□□ -1.63
SNX18Q96RF0 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC4.88□□□□□ -1.63
SNX18Q96RF0 AC023509.5-201ENST00000617434 807 ntBASIC4.88□□□□□ -1.63
SNX18Q96RF0 AL607023.1-201ENST00000620045 248 ntBASIC4.88□□□□□ -1.63
SNX18Q96RF0 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
SNX18Q96RF0 AC126323.6-202ENST00000568092 3511 ntBASIC4.88□□□□□ -1.63
SNX18Q96RF0 CR381670.1-201ENST00000624291 1693 ntBASIC4.88□□□□□ -1.63
SNX18Q96RF0 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
SNX18Q96RF0 Z95331.1-201ENST00000623075 23112 ntBASIC4.88□□□□□ -1.63
SNX18Q96RF0 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
SNX18Q96RF0 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SNX18Q96RF0 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SNX18Q96RF0 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC4.88□□□□□ -1.63
SNX18Q96RF0 AC000123.3-201ENST00000624029 4975 ntBASIC4.88□□□□□ -1.63
SNX18Q96RF0 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SNX18Q96RF0 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC4.87□□□□□ -1.63
SNX18Q96RF0 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
SNX18Q96RF0 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
SNX18Q96RF0 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
SNX18Q96RF0 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SNX18Q96RF0 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
SNX18Q96RF0 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SNX18Q96RF0 AL355852.1-201ENST00000454081 1771 ntBASIC4.87□□□□□ -1.63
SNX18Q96RF0 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SNX18Q96RF0 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
SNX18Q96RF0 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC4.87□□□□□ -1.63
SNX18Q96RF0 RNU4-75P-201ENST00000364621 146 ntBASIC4.87□□□□□ -1.63
SNX18Q96RF0 RNU6-225P-201ENST00000384613 103 ntBASIC4.87□□□□□ -1.63
SNX18Q96RF0 MIR16-1-201ENST00000385271 89 ntBASIC4.87□□□□□ -1.63
SNX18Q96RF0 RNA5SP80-201ENST00000410475 111 ntBASIC4.87□□□□□ -1.63
SNX18Q96RF0 Y_RNA.599-201ENST00000410489 109 ntBASIC4.87□□□□□ -1.63
SNX18Q96RF0 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.87□□□□□ -1.63
SNX18Q96RF0 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC4.87□□□□□ -1.63
SNX18Q96RF0 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
SNX18Q96RF0 P2RY10P2-201ENST00000416730 913 ntBASIC4.87□□□□□ -1.63
SNX18Q96RF0 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.87□□□□□ -1.63
SNX18Q96RF0 DPRXP1-201ENST00000426312 460 ntBASIC4.87□□□□□ -1.63
SNX18Q96RF0 MTCO1P54-201ENST00000430139 712 ntBASIC4.87□□□□□ -1.63
SNX18Q96RF0 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC4.87□□□□□ -1.63
SNX18Q96RF0 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SNX18Q96RF0 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.87□□□□□ -1.63
SNX18Q96RF0 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.87□□□□□ -1.63
SNX18Q96RF0 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC4.87□□□□□ -1.63
SNX18Q96RF0 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC4.87□□□□□ -1.63
SNX18Q96RF0 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC4.87□□□□□ -1.63
SNX18Q96RF0 AL133244.1-201ENST00000456007 258 ntBASIC4.87□□□□□ -1.63
SNX18Q96RF0 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC4.87□□□□□ -1.63
SNX18Q96RF0 WBP1LP4-201ENST00000505043 344 ntBASIC4.87□□□□□ -1.63
SNX18Q96RF0 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC4.87□□□□□ -1.63
SNX18Q96RF0 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC4.87□□□□□ -1.63
SNX18Q96RF0 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC4.87□□□□□ -1.63
SNX18Q96RF0 IGBP1P5-201ENST00000507524 1000 ntBASIC4.87□□□□□ -1.63
SNX18Q96RF0 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC4.87□□□□□ -1.63
SNX18Q96RF0 AC010587.2-201ENST00000511727 448 ntBASIC4.87□□□□□ -1.63
SNX18Q96RF0 MTND3P5-201ENST00000512798 333 ntBASIC4.87□□□□□ -1.63
SNX18Q96RF0 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.87□□□□□ -1.63
SNX18Q96RF0 AC027308.1-201ENST00000517993 110 ntBASIC4.87□□□□□ -1.63
SNX18Q96RF0 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SNX18Q96RF0 AC100784.1-201ENST00000522790 310 ntBASIC4.87□□□□□ -1.63
SNX18Q96RF0 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.87□□□□□ -1.63
SNX18Q96RF0 AL121766.1-201ENST00000547436 487 ntBASIC4.87□□□□□ -1.63
SNX18Q96RF0 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SNX18Q96RF0 AL049872.1-201ENST00000556323 322 ntBASIC4.87□□□□□ -1.63
SNX18Q96RF0 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC4.87□□□□□ -1.63
SNX18Q96RF0 AC122134.1-201ENST00000565664 1104 ntBASIC4.87□□□□□ -1.63
SNX18Q96RF0 BPTFP1-201ENST00000579209 492 ntBASIC4.87□□□□□ -1.63
SNX18Q96RF0 RN7SL356P-201ENST00000582228 248 ntBASIC4.87□□□□□ -1.63
SNX18Q96RF0 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms