Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC5.65□□□□□ -1.5
PTCHD1Q96NR3 AC126175.1-201ENST00000617041 758 ntBASIC5.65□□□□□ -1.5
PTCHD1Q96NR3 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.65□□□□□ -1.5
PTCHD1Q96NR3 MIR1910-201ENST00000636955 80 ntBASIC5.65□□□□□ -1.5
PTCHD1Q96NR3 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
PTCHD1Q96NR3 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
PTCHD1Q96NR3 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
PTCHD1Q96NR3 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC5.65□□□□□ -1.51
PTCHD1Q96NR3 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
PTCHD1Q96NR3 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
PTCHD1Q96NR3 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC5.65□□□□□ -1.51
PTCHD1Q96NR3 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
PTCHD1Q96NR3 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.65□□□□□ -1.51
PTCHD1Q96NR3 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
PTCHD1Q96NR3 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
PTCHD1Q96NR3 RMST-202ENST00000541282 2099 ntTSL 2 BASIC5.65□□□□□ -1.51
PTCHD1Q96NR3 AC068769.1-201ENST00000474767 2426 ntBASIC5.65□□□□□ -1.51
PTCHD1Q96NR3 AC016583.1-201ENST00000624221 2431 ntBASIC5.65□□□□□ -1.51
PTCHD1Q96NR3 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
PTCHD1Q96NR3 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
PTCHD1Q96NR3 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.65□□□□□ -1.51
PTCHD1Q96NR3 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC5.65□□□□□ -1.51
PTCHD1Q96NR3 AC012254.3-201ENST00000591183 2117 ntBASIC5.65□□□□□ -1.51
PTCHD1Q96NR3 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
PTCHD1Q96NR3 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
PTCHD1Q96NR3 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.65□□□□□ -1.51
PTCHD1Q96NR3 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
PTCHD1Q96NR3 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
PTCHD1Q96NR3 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PTCHD1Q96NR3 AP002512.4-202ENST00000641599 4530 ntBASIC5.64□□□□□ -1.51
PTCHD1Q96NR3 AC017104.4-201ENST00000636283 1592 ntBASIC5.64□□□□□ -1.51
PTCHD1Q96NR3 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.64□□□□□ -1.51
PTCHD1Q96NR3 AC021242.1-201ENST00000507315 2035 ntBASIC5.64□□□□□ -1.51
PTCHD1Q96NR3 AC007842.1-201ENST00000597336 2039 ntBASIC5.64□□□□□ -1.51
PTCHD1Q96NR3 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PTCHD1Q96NR3 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC5.64□□□□□ -1.51
PTCHD1Q96NR3 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
PTCHD1Q96NR3 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
PTCHD1Q96NR3 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
PTCHD1Q96NR3 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PTCHD1Q96NR3 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PTCHD1Q96NR3 CBX3P1-201ENST00000325243 554 ntBASIC5.64□□□□□ -1.51
PTCHD1Q96NR3 SNRPEP3-201ENST00000338402 276 ntBASIC5.64□□□□□ -1.51
PTCHD1Q96NR3 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC5.64□□□□□ -1.51
PTCHD1Q96NR3 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PTCHD1Q96NR3 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
PTCHD1Q96NR3 RNU6-1011P-201ENST00000384668 107 ntBASIC5.64□□□□□ -1.51
PTCHD1Q96NR3 Y_RNA.573-201ENST00000384763 105 ntBASIC5.64□□□□□ -1.51
PTCHD1Q96NR3 MIR1282-201ENST00000408865 101 ntBASIC5.64□□□□□ -1.51
PTCHD1Q96NR3 HSD17B7P1-201ENST00000412419 1017 ntBASIC5.64□□□□□ -1.51
PTCHD1Q96NR3 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC5.64□□□□□ -1.51
PTCHD1Q96NR3 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.64□□□□□ -1.51
PTCHD1Q96NR3 AC016027.5-201ENST00000427227 210 ntBASIC5.64□□□□□ -1.51
PTCHD1Q96NR3 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PTCHD1Q96NR3 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC5.64□□□□□ -1.51
PTCHD1Q96NR3 TUBB4BP6-201ENST00000437576 479 ntBASIC5.64□□□□□ -1.51
PTCHD1Q96NR3 RPL7P11-201ENST00000437586 658 ntBASIC5.64□□□□□ -1.51
PTCHD1Q96NR3 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.64□□□□□ -1.51
PTCHD1Q96NR3 RABEPKP1-201ENST00000440529 1026 ntBASIC5.64□□□□□ -1.51
PTCHD1Q96NR3 PGBD4P3-201ENST00000440731 581 ntBASIC5.64□□□□□ -1.51
PTCHD1Q96NR3 RPS10P18-201ENST00000442662 495 ntBASIC5.64□□□□□ -1.51
PTCHD1Q96NR3 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC5.64□□□□□ -1.51
PTCHD1Q96NR3 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC5.64□□□□□ -1.51
PTCHD1Q96NR3 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC5.64□□□□□ -1.51
PTCHD1Q96NR3 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC5.64□□□□□ -1.51
PTCHD1Q96NR3 AL590365.1-201ENST00000450788 243 ntBASIC5.64□□□□□ -1.51
PTCHD1Q96NR3 TRGVB-201ENST00000453257 471 ntBASIC5.64□□□□□ -1.51
PTCHD1Q96NR3 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC5.64□□□□□ -1.51
PTCHD1Q96NR3 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PTCHD1Q96NR3 MTND1P11-201ENST00000456661 876 ntBASIC5.64□□□□□ -1.51
PTCHD1Q96NR3 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.64□□□□□ -1.51
PTCHD1Q96NR3 UBDP1-202ENST00000457888 382 ntBASIC5.64□□□□□ -1.51
PTCHD1Q96NR3 MEMO1P3-201ENST00000459811 302 ntBASIC5.64□□□□□ -1.51
PTCHD1Q96NR3 AC097493.1-201ENST00000463958 372 ntBASIC5.64□□□□□ -1.51
PTCHD1Q96NR3 AP000852.1-201ENST00000472460 573 ntBASIC5.64□□□□□ -1.51
PTCHD1Q96NR3 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC5.64□□□□□ -1.51
PTCHD1Q96NR3 ACTR3P3-201ENST00000480448 893 ntBASIC5.64□□□□□ -1.51
PTCHD1Q96NR3 AC013828.1-201ENST00000481845 158 ntBASIC5.64□□□□□ -1.51
PTCHD1Q96NR3 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC5.64□□□□□ -1.51
PTCHD1Q96NR3 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC5.64□□□□□ -1.51
PTCHD1Q96NR3 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC5.64□□□□□ -1.51
PTCHD1Q96NR3 RN7SKP67-201ENST00000515905 235 ntBASIC5.64□□□□□ -1.51
PTCHD1Q96NR3 RNU6-150P-201ENST00000516237 95 ntBASIC5.64□□□□□ -1.51
PTCHD1Q96NR3 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC5.64□□□□□ -1.51
PTCHD1Q96NR3 WBP1LP3-201ENST00000523033 208 ntBASIC5.64□□□□□ -1.51
PTCHD1Q96NR3 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.64□□□□□ -1.51
PTCHD1Q96NR3 TRIM77BP-201ENST00000524985 1119 ntBASIC5.64□□□□□ -1.51
PTCHD1Q96NR3 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC5.64□□□□□ -1.51
PTCHD1Q96NR3 RAB11AP2-201ENST00000545905 639 ntBASIC5.64□□□□□ -1.51
PTCHD1Q96NR3 GLYCAM1-201ENST00000546596 285 ntBASIC5.64□□□□□ -1.51
PTCHD1Q96NR3 AC125612.1-201ENST00000547580 377 ntBASIC5.64□□□□□ -1.51
PTCHD1Q96NR3 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.64□□□□□ -1.51
PTCHD1Q96NR3 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.64□□□□□ -1.51
PTCHD1Q96NR3 MEMO1P5-201ENST00000604810 406 ntBASIC5.64□□□□□ -1.51
PTCHD1Q96NR3 AL049634.3-201ENST00000604968 457 ntBASIC5.64□□□□□ -1.51
PTCHD1Q96NR3 uc_338.26-201ENST00000612659 160 ntBASIC5.64□□□□□ -1.51
PTCHD1Q96NR3 AC104010.1-201ENST00000616889 150 ntBASIC5.64□□□□□ -1.51
PTCHD1Q96NR3 uc_338.9-201ENST00000617424 182 ntBASIC5.64□□□□□ -1.51
PTCHD1Q96NR3 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC5.64□□□□□ -1.51
PTCHD1Q96NR3 AC068880.5-201ENST00000624331 290 ntBASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 138.9 ms