Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 TANK-203ENST00000402568 878 ntTSL 5 BASIC4.14□□□□□ -1.75
NUDCD3Q8IVD9 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
NUDCD3Q8IVD9 ZNF92P1Y-201ENST00000415010 1191 ntBASIC4.14□□□□□ -1.75
NUDCD3Q8IVD9 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.14□□□□□ -1.75
NUDCD3Q8IVD9 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.14□□□□□ -1.75
NUDCD3Q8IVD9 RPL12P3-201ENST00000440080 396 ntBASIC4.14□□□□□ -1.75
NUDCD3Q8IVD9 AL356535.1-201ENST00000440335 398 ntBASIC4.14□□□□□ -1.75
NUDCD3Q8IVD9 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.14□□□□□ -1.75
NUDCD3Q8IVD9 HIGD1AP8-201ENST00000453927 274 ntBASIC4.14□□□□□ -1.75
NUDCD3Q8IVD9 AL133477.1-201ENST00000457472 514 ntBASIC4.14□□□□□ -1.75
NUDCD3Q8IVD9 RPS3AP41-201ENST00000462701 778 ntBASIC4.14□□□□□ -1.75
NUDCD3Q8IVD9 RN7SL610P-201ENST00000463845 291 ntBASIC4.14□□□□□ -1.75
NUDCD3Q8IVD9 RPL32P9-201ENST00000487963 407 ntBASIC4.14□□□□□ -1.75
NUDCD3Q8IVD9 AC069499.1-201ENST00000489433 509 ntBASIC4.14□□□□□ -1.75
NUDCD3Q8IVD9 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
NUDCD3Q8IVD9 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
NUDCD3Q8IVD9 AC021087.2-201ENST00000504656 1203 ntBASIC4.14□□□□□ -1.75
NUDCD3Q8IVD9 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC4.14□□□□□ -1.75
NUDCD3Q8IVD9 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.14□□□□□ -1.75
NUDCD3Q8IVD9 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC4.14□□□□□ -1.75
NUDCD3Q8IVD9 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC4.14□□□□□ -1.75
NUDCD3Q8IVD9 SMARCE1P4-201ENST00000523647 241 ntBASIC4.14□□□□□ -1.75
NUDCD3Q8IVD9 EIF4A2P3-201ENST00000525903 1055 ntBASIC4.14□□□□□ -1.75
NUDCD3Q8IVD9 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.14□□□□□ -1.75
NUDCD3Q8IVD9 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC4.14□□□□□ -1.75
NUDCD3Q8IVD9 AC051619.2-201ENST00000559063 397 ntBASIC4.14□□□□□ -1.75
NUDCD3Q8IVD9 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.14□□□□□ -1.75
NUDCD3Q8IVD9 AL360157.1-201ENST00000565962 87 ntBASIC4.14□□□□□ -1.75
NUDCD3Q8IVD9 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.14□□□□□ -1.75
NUDCD3Q8IVD9 MIR4716-201ENST00000579628 84 ntBASIC4.14□□□□□ -1.75
NUDCD3Q8IVD9 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.14□□□□□ -1.75
NUDCD3Q8IVD9 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.14□□□□□ -1.75
NUDCD3Q8IVD9 AC009318.3-201ENST00000616916 503 ntBASIC4.14□□□□□ -1.75
NUDCD3Q8IVD9 AP005264.7-201ENST00000625003 745 ntBASIC4.14□□□□□ -1.75
NUDCD3Q8IVD9 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.14□□□□□ -1.75
NUDCD3Q8IVD9 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
NUDCD3Q8IVD9 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.14□□□□□ -1.75
NUDCD3Q8IVD9 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
NUDCD3Q8IVD9 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
NUDCD3Q8IVD9 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
NUDCD3Q8IVD9 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
NUDCD3Q8IVD9 AC093311.1-201ENST00000506586 2021 ntBASIC4.13□□□□□ -1.75
NUDCD3Q8IVD9 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
NUDCD3Q8IVD9 SNORA70F-201ENST00000384142 135 ntBASIC4.13□□□□□ -1.75
NUDCD3Q8IVD9 RNU6-532P-201ENST00000384318 107 ntBASIC4.13□□□□□ -1.75
NUDCD3Q8IVD9 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
NUDCD3Q8IVD9 AL583835.1-201ENST00000399570 407 ntBASIC4.13□□□□□ -1.75
NUDCD3Q8IVD9 RPL26P37-201ENST00000411983 438 ntBASIC4.13□□□□□ -1.75
NUDCD3Q8IVD9 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC4.13□□□□□ -1.75
NUDCD3Q8IVD9 TMSB10P2-201ENST00000416049 131 ntBASIC4.13□□□□□ -1.75
NUDCD3Q8IVD9 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.13□□□□□ -1.75
NUDCD3Q8IVD9 RPS26P13-201ENST00000419030 330 ntBASIC4.13□□□□□ -1.75
NUDCD3Q8IVD9 AC048351.1-201ENST00000420064 602 ntBASIC4.13□□□□□ -1.75
NUDCD3Q8IVD9 AC073464.3-201ENST00000422564 712 ntBASIC4.13□□□□□ -1.75
NUDCD3Q8IVD9 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC4.13□□□□□ -1.75
NUDCD3Q8IVD9 AC234779.1-201ENST00000425910 285 ntBASIC4.13□□□□□ -1.75
NUDCD3Q8IVD9 AC006455.6-201ENST00000426192 893 ntBASIC4.13□□□□□ -1.75
NUDCD3Q8IVD9 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.13□□□□□ -1.75
NUDCD3Q8IVD9 AC104837.2-201ENST00000427236 424 ntBASIC4.13□□□□□ -1.75
NUDCD3Q8IVD9 AC011742.1-201ENST00000431448 434 ntBASIC4.13□□□□□ -1.75
NUDCD3Q8IVD9 VN1R54P-201ENST00000435210 1049 ntBASIC4.13□□□□□ -1.75
NUDCD3Q8IVD9 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.13□□□□□ -1.75
NUDCD3Q8IVD9 AL627224.1-201ENST00000448334 444 ntBASIC4.13□□□□□ -1.75
NUDCD3Q8IVD9 AC092324.1-201ENST00000468671 324 ntBASIC4.13□□□□□ -1.75
NUDCD3Q8IVD9 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.13□□□□□ -1.75
NUDCD3Q8IVD9 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.13□□□□□ -1.75
NUDCD3Q8IVD9 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC4.13□□□□□ -1.75
NUDCD3Q8IVD9 AC005912.1-201ENST00000495392 255 ntBASIC4.13□□□□□ -1.75
NUDCD3Q8IVD9 RPL31P61-201ENST00000496160 376 ntBASIC4.13□□□□□ -1.75
NUDCD3Q8IVD9 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.13□□□□□ -1.75
NUDCD3Q8IVD9 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.13□□□□□ -1.75
NUDCD3Q8IVD9 AC109458.1-201ENST00000508858 316 ntBASIC4.13□□□□□ -1.75
NUDCD3Q8IVD9 RNA5SP73-201ENST00000516744 108 ntBASIC4.13□□□□□ -1.75
NUDCD3Q8IVD9 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC4.13□□□□□ -1.75
NUDCD3Q8IVD9 IGLVIV-53-201ENST00000520107 367 ntBASIC4.13□□□□□ -1.75
NUDCD3Q8IVD9 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC4.13□□□□□ -1.75
NUDCD3Q8IVD9 AC107016.1-201ENST00000550463 337 ntBASIC4.13□□□□□ -1.75
NUDCD3Q8IVD9 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.13□□□□□ -1.75
NUDCD3Q8IVD9 MIR4436B2-201ENST00000581415 91 ntBASIC4.13□□□□□ -1.75
NUDCD3Q8IVD9 RN7SL690P-201ENST00000582087 240 ntBASIC4.13□□□□□ -1.75
NUDCD3Q8IVD9 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.13□□□□□ -1.75
NUDCD3Q8IVD9 MIR4436B1-201ENST00000583272 91 ntBASIC4.13□□□□□ -1.75
NUDCD3Q8IVD9 AC104662.1-201ENST00000604448 511 ntBASIC4.13□□□□□ -1.75
NUDCD3Q8IVD9 HMGB1P50-201ENST00000605814 607 ntBASIC4.13□□□□□ -1.75
NUDCD3Q8IVD9 AP003392.5-201ENST00000607857 415 ntBASIC4.13□□□□□ -1.75
NUDCD3Q8IVD9 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
NUDCD3Q8IVD9 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.13□□□□□ -1.75
NUDCD3Q8IVD9 AL359715.5-201ENST00000623431 443 ntBASIC4.13□□□□□ -1.75
NUDCD3Q8IVD9 AL773545.4-201ENST00000637262 310 ntBASIC4.13□□□□□ -1.75
NUDCD3Q8IVD9 AL513478.4-201ENST00000641636 310 ntBASIC4.13□□□□□ -1.75
NUDCD3Q8IVD9 OR5AC4P-202ENST00000642086 985 ntBASIC4.13□□□□□ -1.75
NUDCD3Q8IVD9 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
NUDCD3Q8IVD9 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
NUDCD3Q8IVD9 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
NUDCD3Q8IVD9 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
NUDCD3Q8IVD9 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.13□□□□□ -1.75
NUDCD3Q8IVD9 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
NUDCD3Q8IVD9 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
NUDCD3Q8IVD9 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.12□□□□□ -1.75
NUDCD3Q8IVD9 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms