Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC3.09□□□□□ -1.92
VPS13CQ709C8 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.92
VPS13CQ709C8 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
VPS13CQ709C8 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC3.09□□□□□ -1.92
VPS13CQ709C8 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
VPS13CQ709C8 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.08□□□□□ -1.92
VPS13CQ709C8 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
VPS13CQ709C8 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.08□□□□□ -1.92
VPS13CQ709C8 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
VPS13CQ709C8 DMD-228ENST00000541735 7080 ntTSL 5 BASIC3.08□□□□□ -1.92
VPS13CQ709C8 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
VPS13CQ709C8 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
VPS13CQ709C8 PHLPP2-201ENST00000393524 8467 ntTSL 2 BASIC3.08□□□□□ -1.92
VPS13CQ709C8 ARF4P3-201ENST00000397387 509 ntBASIC3.08□□□□□ -1.92
VPS13CQ709C8 AL359643.1-201ENST00000404109 423 ntBASIC3.08□□□□□ -1.92
VPS13CQ709C8 AC009506.2-201ENST00000420635 840 ntBASIC3.08□□□□□ -1.92
VPS13CQ709C8 RPL31P61-201ENST00000496160 376 ntBASIC3.08□□□□□ -1.92
VPS13CQ709C8 AC108941.1-201ENST00000502853 530 ntBASIC3.08□□□□□ -1.92
VPS13CQ709C8 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.08□□□□□ -1.92
VPS13CQ709C8 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.08□□□□□ -1.92
VPS13CQ709C8 RFPL4AP5-201ENST00000514977 504 ntBASIC3.08□□□□□ -1.92
VPS13CQ709C8 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
VPS13CQ709C8 NCAPGP2-201ENST00000557911 754 ntBASIC3.08□□□□□ -1.92
VPS13CQ709C8 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
VPS13CQ709C8 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
VPS13CQ709C8 AP003175.1-201ENST00000641383 6658 ntBASIC3.08□□□□□ -1.92
VPS13CQ709C8 NOX4-214ENST00000532825 2039 ntTSL 2 BASIC3.08□□□□□ -1.92
VPS13CQ709C8 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
VPS13CQ709C8 GABRB3-216ENST00000628124 5581 ntTSL 2 BASIC3.08□□□□□ -1.92
VPS13CQ709C8 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
VPS13CQ709C8 RNA5SP51-201ENST00000364750 119 ntBASIC3.08□□□□□ -1.92
VPS13CQ709C8 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.08□□□□□ -1.92
VPS13CQ709C8 AC080014.1-201ENST00000496877 1201 ntBASIC3.08□□□□□ -1.92
VPS13CQ709C8 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.08□□□□□ -1.92
VPS13CQ709C8 AC090151.1-201ENST00000520784 730 ntBASIC3.08□□□□□ -1.92
VPS13CQ709C8 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.08□□□□□ -1.92
VPS13CQ709C8 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC3.08□□□□□ -1.92
VPS13CQ709C8 AC119674.1-207ENST00000641355 633 ntBASIC3.08□□□□□ -1.92
VPS13CQ709C8 OSBPL9P1-201ENST00000604744 1469 ntBASIC3.08□□□□□ -1.92
VPS13CQ709C8 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
VPS13CQ709C8 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC3.08□□□□□ -1.92
VPS13CQ709C8 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC3.08□□□□□ -1.92
VPS13CQ709C8 AL591419.1-201ENST00000427423 339 ntBASIC3.08□□□□□ -1.92
VPS13CQ709C8 AC091862.1-201ENST00000438016 1100 ntBASIC3.08□□□□□ -1.92
VPS13CQ709C8 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.08□□□□□ -1.92
VPS13CQ709C8 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC3.08□□□□□ -1.92
VPS13CQ709C8 AC022106.2-201ENST00000620114 757 ntBASIC3.08□□□□□ -1.92
VPS13CQ709C8 AL049781.1-201ENST00000623195 3585 ntBASIC3.08□□□□□ -1.92
VPS13CQ709C8 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
VPS13CQ709C8 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.08□□□□□ -1.92
VPS13CQ709C8 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC3.08□□□□□ -1.92
VPS13CQ709C8 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC3.08□□□□□ -1.92
VPS13CQ709C8 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC3.08□□□□□ -1.92
VPS13CQ709C8 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
VPS13CQ709C8 REV3L-203ENST00000368805 10461 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
VPS13CQ709C8 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC3.07□□□□□ -1.92
VPS13CQ709C8 RNA5SP126-201ENST00000365092 109 ntBASIC3.07□□□□□ -1.92
VPS13CQ709C8 AL136131.1-201ENST00000406079 803 ntBASIC3.07□□□□□ -1.92
VPS13CQ709C8 SNORA3C-201ENST00000408792 125 ntBASIC3.07□□□□□ -1.92
VPS13CQ709C8 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.07□□□□□ -1.92
VPS13CQ709C8 UBE2V1P1-201ENST00000430836 445 ntBASIC3.07□□□□□ -1.92
VPS13CQ709C8 SETD6P1-201ENST00000444575 317 ntBASIC3.07□□□□□ -1.92
VPS13CQ709C8 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
VPS13CQ709C8 S100A11P2-201ENST00000467589 312 ntBASIC3.07□□□□□ -1.92
VPS13CQ709C8 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.07□□□□□ -1.92
VPS13CQ709C8 RNA5SP208-201ENST00000516156 78 ntBASIC3.07□□□□□ -1.92
VPS13CQ709C8 AC010591.1-201ENST00000603941 649 ntBASIC3.07□□□□□ -1.92
VPS13CQ709C8 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
VPS13CQ709C8 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC3.07□□□□□ -1.92
VPS13CQ709C8 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
VPS13CQ709C8 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
VPS13CQ709C8 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.07□□□□□ -1.92
VPS13CQ709C8 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
VPS13CQ709C8 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.07□□□□□ -1.92
VPS13CQ709C8 GTF3AP5-201ENST00000442645 697 ntBASIC3.07□□□□□ -1.92
VPS13CQ709C8 IGHV3-32-201ENST00000519182 355 ntBASIC3.07□□□□□ -1.92
VPS13CQ709C8 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.07□□□□□ -1.92
VPS13CQ709C8 AL353743.1-202ENST00000431724 1695 ntBASIC3.07□□□□□ -1.92
VPS13CQ709C8 OR5AU1-202ENST00000641039 8232 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
VPS13CQ709C8 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC3.07□□□□□ -1.92
VPS13CQ709C8 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC3.07□□□□□ -1.92
VPS13CQ709C8 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC3.07□□□□□ -1.92
VPS13CQ709C8 AC009229.4-201ENST00000623854 1947 ntBASIC3.07□□□□□ -1.92
VPS13CQ709C8 SNORA80A-201ENST00000363922 136 ntBASIC3.07□□□□□ -1.92
VPS13CQ709C8 SNORA38.1-201ENST00000364172 131 ntBASIC3.07□□□□□ -1.92
VPS13CQ709C8 MIR199A2-201ENST00000385289 110 ntBASIC3.07□□□□□ -1.92
VPS13CQ709C8 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.07□□□□□ -1.92
VPS13CQ709C8 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC3.07□□□□□ -1.92
VPS13CQ709C8 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.07□□□□□ -1.92
VPS13CQ709C8 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.07□□□□□ -1.92
VPS13CQ709C8 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.07□□□□□ -1.92
VPS13CQ709C8 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.07□□□□□ -1.92
VPS13CQ709C8 RPL12P50-201ENST00000603116 116 ntBASIC3.07□□□□□ -1.92
VPS13CQ709C8 ATP5A1P2-202ENST00000616464 443 ntBASIC3.07□□□□□ -1.92
VPS13CQ709C8 AC234782.5-201ENST00000617723 324 ntBASIC3.07□□□□□ -1.92
VPS13CQ709C8 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC3.07□□□□□ -1.92
VPS13CQ709C8 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC3.07□□□□□ -1.92
VPS13CQ709C8 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
VPS13CQ709C8 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
VPS13CQ709C8 MIR133A2-201ENST00000347538 102 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms