Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 CHEK2P5-201ENST00000423877 246 ntBASIC3.4□□□□□ -1.87
LSM3P62310 AL158071.1-201ENST00000430315 461 ntBASIC3.4□□□□□ -1.87
LSM3P62310 COX6B1P7-201ENST00000430845 235 ntBASIC3.4□□□□□ -1.87
LSM3P62310 TEX41-205ENST00000431734 529 ntTSL 4 BASIC3.4□□□□□ -1.87
LSM3P62310 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.4□□□□□ -1.87
LSM3P62310 AL391987.1-201ENST00000441025 200 ntBASIC3.4□□□□□ -1.87
LSM3P62310 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.4□□□□□ -1.87
LSM3P62310 RPS11P1-201ENST00000451072 473 ntBASIC3.4□□□□□ -1.87
LSM3P62310 RNU7-170P-201ENST00000459303 61 ntBASIC3.4□□□□□ -1.87
LSM3P62310 AC010468.1-201ENST00000461022 817 ntBASIC3.4□□□□□ -1.87
LSM3P62310 AC007537.2-201ENST00000472093 511 ntBASIC3.4□□□□□ -1.87
LSM3P62310 AC004815.1-201ENST00000484185 331 ntBASIC3.4□□□□□ -1.87
LSM3P62310 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC3.4□□□□□ -1.87
LSM3P62310 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC3.4□□□□□ -1.87
LSM3P62310 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC3.4□□□□□ -1.87
LSM3P62310 OR8G5-201ENST00000524943 1041 ntBASIC3.4□□□□□ -1.87
LSM3P62310 OR4A12P-201ENST00000530847 918 ntBASIC3.4□□□□□ -1.87
LSM3P62310 AL139174.1-201ENST00000531489 886 ntBASIC3.4□□□□□ -1.87
LSM3P62310 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC3.4□□□□□ -1.87
LSM3P62310 AL137849.1-201ENST00000604767 169 ntBASIC3.4□□□□□ -1.87
LSM3P62310 AL445222.1-201ENST00000607259 628 ntBASIC3.4□□□□□ -1.87
LSM3P62310 AC016957.2-201ENST00000616998 848 ntBASIC3.4□□□□□ -1.87
LSM3P62310 MIR7151-201ENST00000617477 60 ntBASIC3.4□□□□□ -1.87
LSM3P62310 MIR6861-201ENST00000618657 64 ntBASIC3.4□□□□□ -1.87
LSM3P62310 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.4□□□□□ -1.87
LSM3P62310 AC105105.5-201ENST00000622635 1294 ntBASIC3.4□□□□□ -1.87
LSM3P62310 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.4□□□□□ -1.87
LSM3P62310 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC3.39□□□□□ -1.87
LSM3P62310 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
LSM3P62310 EED-206ENST00000527888 1422 ntTSL 2 BASIC3.39□□□□□ -1.87
LSM3P62310 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
LSM3P62310 AL592148.3-201ENST00000608771 2646 ntBASIC3.39□□□□□ -1.87
LSM3P62310 AC107027.3-201ENST00000565095 3473 ntBASIC3.39□□□□□ -1.87
LSM3P62310 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
LSM3P62310 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
LSM3P62310 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.39□□□□□ -1.87
LSM3P62310 RNU6-729P-201ENST00000384399 107 ntBASIC3.39□□□□□ -1.87
LSM3P62310 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
LSM3P62310 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
LSM3P62310 AC106901.1-201ENST00000425086 698 ntBASIC3.39□□□□□ -1.87
LSM3P62310 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.39□□□□□ -1.87
LSM3P62310 AL357520.1-201ENST00000441557 453 ntBASIC3.39□□□□□ -1.87
LSM3P62310 RPL38P1-201ENST00000460914 211 ntBASIC3.39□□□□□ -1.87
LSM3P62310 EIF2S2P4-201ENST00000461070 984 ntBASIC3.39□□□□□ -1.87
LSM3P62310 FCF1P3-201ENST00000496394 590 ntBASIC3.39□□□□□ -1.87
LSM3P62310 AC068305.1-201ENST00000497406 726 ntBASIC3.39□□□□□ -1.87
LSM3P62310 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC3.39□□□□□ -1.87
LSM3P62310 AC110768.1-201ENST00000509222 400 ntBASIC3.39□□□□□ -1.87
LSM3P62310 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC3.39□□□□□ -1.87
LSM3P62310 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
LSM3P62310 PDCL2P2-201ENST00000533651 189 ntBASIC3.39□□□□□ -1.87
LSM3P62310 AC011602.1-201ENST00000546484 331 ntBASIC3.39□□□□□ -1.87
LSM3P62310 HMGN2P6-201ENST00000551091 273 ntBASIC3.39□□□□□ -1.87
LSM3P62310 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
LSM3P62310 MIR3186-201ENST00000577404 85 ntBASIC3.39□□□□□ -1.87
LSM3P62310 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.39□□□□□ -1.87
LSM3P62310 MIR5010-201ENST00000582846 120 ntBASIC3.39□□□□□ -1.87
LSM3P62310 AC110743.1-201ENST00000584870 478 ntBASIC3.39□□□□□ -1.87
LSM3P62310 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.39□□□□□ -1.87
LSM3P62310 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC3.39□□□□□ -1.87
LSM3P62310 AL161729.3-201ENST00000603533 673 ntBASIC3.39□□□□□ -1.87
LSM3P62310 SUMO2P15-201ENST00000604285 278 ntBASIC3.39□□□□□ -1.87
LSM3P62310 AC022467.1-201ENST00000614738 749 ntBASIC3.39□□□□□ -1.87
LSM3P62310 AL158062.1-201ENST00000619632 745 ntBASIC3.39□□□□□ -1.87
LSM3P62310 AL139254.3-201ENST00000641097 674 ntBASIC3.39□□□□□ -1.87
LSM3P62310 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
LSM3P62310 TMEM161BP1-201ENST00000457388 1457 ntBASIC3.39□□□□□ -1.87
LSM3P62310 AC134882.1-201ENST00000603738 1676 ntBASIC3.39□□□□□ -1.87
LSM3P62310 AC074029.4-201ENST00000624796 1859 ntBASIC3.39□□□□□ -1.87
LSM3P62310 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.39□□□□□ -1.87
LSM3P62310 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
LSM3P62310 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
LSM3P62310 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.38□□□□□ -1.87
LSM3P62310 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
LSM3P62310 SNORA11.3-201ENST00000408471 128 ntBASIC3.38□□□□□ -1.87
LSM3P62310 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC3.38□□□□□ -1.87
LSM3P62310 LIPT1P1-201ENST00000415870 1186 ntBASIC3.38□□□□□ -1.87
LSM3P62310 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC3.38□□□□□ -1.87
LSM3P62310 RPL31P12-201ENST00000422587 358 ntBASIC3.38□□□□□ -1.87
LSM3P62310 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC3.38□□□□□ -1.87
LSM3P62310 RPS3AP54-201ENST00000435535 734 ntBASIC3.38□□□□□ -1.87
LSM3P62310 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC3.38□□□□□ -1.87
LSM3P62310 AL138878.2-201ENST00000440581 1241 ntBASIC3.38□□□□□ -1.87
LSM3P62310 NDUFS5P3-201ENST00000450668 321 ntBASIC3.38□□□□□ -1.87
LSM3P62310 RPS3AP53-201ENST00000454716 778 ntBASIC3.38□□□□□ -1.87
LSM3P62310 RN7SL860P-201ENST00000473738 223 ntBASIC3.38□□□□□ -1.87
LSM3P62310 RPS4XP22-201ENST00000480755 780 ntBASIC3.38□□□□□ -1.87
LSM3P62310 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC3.38□□□□□ -1.87
LSM3P62310 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC3.38□□□□□ -1.87
LSM3P62310 UBE2Q2P10-201ENST00000514854 900 ntBASIC3.38□□□□□ -1.87
LSM3P62310 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC3.38□□□□□ -1.87
LSM3P62310 AC010476.1-201ENST00000519111 851 ntBASIC3.38□□□□□ -1.87
LSM3P62310 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.38□□□□□ -1.87
LSM3P62310 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC3.38□□□□□ -1.87
LSM3P62310 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC3.38□□□□□ -1.87
LSM3P62310 TGIF1P1-201ENST00000558095 802 ntBASIC3.38□□□□□ -1.87
LSM3P62310 AC007225.2-201ENST00000562529 256 ntBASIC3.38□□□□□ -1.87
LSM3P62310 MIR6868-201ENST00000611215 58 ntBASIC3.38□□□□□ -1.87
LSM3P62310 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC3.38□□□□□ -1.87
LSM3P62310 SNORA11.6-201ENST00000619030 128 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 136.9 ms