Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC5.23□□□□□ -1.57
RIPK4P57078 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC5.23□□□□□ -1.57
RIPK4P57078 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
RIPK4P57078 Y_RNA.126-201ENST00000363382 111 ntBASIC5.23□□□□□ -1.57
RIPK4P57078 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RIPK4P57078 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
RIPK4P57078 CASKP1-201ENST00000412870 582 ntBASIC5.23□□□□□ -1.57
RIPK4P57078 SETP10-201ENST00000424368 814 ntBASIC5.23□□□□□ -1.57
RIPK4P57078 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC5.23□□□□□ -1.57
RIPK4P57078 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC5.23□□□□□ -1.57
RIPK4P57078 BTG3P1-201ENST00000435859 716 ntBASIC5.23□□□□□ -1.57
RIPK4P57078 VN1R96P-201ENST00000446052 858 ntBASIC5.23□□□□□ -1.57
RIPK4P57078 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
RIPK4P57078 RN7SL271P-201ENST00000487601 295 ntBASIC5.23□□□□□ -1.57
RIPK4P57078 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC5.23□□□□□ -1.57
RIPK4P57078 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.23□□□□□ -1.57
RIPK4P57078 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC5.23□□□□□ -1.57
RIPK4P57078 OR5M7P-201ENST00000526140 972 ntBASIC5.23□□□□□ -1.57
RIPK4P57078 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC5.23□□□□□ -1.57
RIPK4P57078 BNIP3P5-201ENST00000562290 498 ntBASIC5.23□□□□□ -1.57
RIPK4P57078 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC5.23□□□□□ -1.57
RIPK4P57078 AC120057.2-201ENST00000571520 271 ntBASIC5.23□□□□□ -1.57
RIPK4P57078 MIR4286-201ENST00000580651 93 ntBASIC5.23□□□□□ -1.57
RIPK4P57078 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC5.23□□□□□ -1.57
RIPK4P57078 AC022916.3-201ENST00000592961 742 ntBASIC5.23□□□□□ -1.57
RIPK4P57078 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC5.23□□□□□ -1.57
RIPK4P57078 AC099676.1-201ENST00000608886 657 ntBASIC5.23□□□□□ -1.57
RIPK4P57078 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC5.23□□□□□ -1.57
RIPK4P57078 AL356121.2-201ENST00000624715 780 ntBASIC5.23□□□□□ -1.57
RIPK4P57078 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC5.23□□□□□ -1.57
RIPK4P57078 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
RIPK4P57078 AC123912.3-201ENST00000600907 1367 ntBASIC5.23□□□□□ -1.57
RIPK4P57078 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RIPK4P57078 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RIPK4P57078 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
RIPK4P57078 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
RIPK4P57078 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
RIPK4P57078 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC5.23□□□□□ -1.57
RIPK4P57078 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
RIPK4P57078 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RIPK4P57078 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC5.22□□□□□ -1.57
RIPK4P57078 CDY11P-201ENST00000447168 1651 ntBASIC5.22□□□□□ -1.57
RIPK4P57078 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RIPK4P57078 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RIPK4P57078 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC5.22□□□□□ -1.57
RIPK4P57078 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC5.22□□□□□ -1.57
RIPK4P57078 RNU6-213P-201ENST00000384051 104 ntBASIC5.22□□□□□ -1.57
RIPK4P57078 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC5.22□□□□□ -1.57
RIPK4P57078 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC5.22□□□□□ -1.57
RIPK4P57078 AC244033.1-201ENST00000426826 870 ntBASIC5.22□□□□□ -1.57
RIPK4P57078 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC5.22□□□□□ -1.57
RIPK4P57078 FTH1P2-201ENST00000466086 412 ntBASIC5.22□□□□□ -1.57
RIPK4P57078 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC5.22□□□□□ -1.57
RIPK4P57078 VN1R105P-201ENST00000486595 910 ntBASIC5.22□□□□□ -1.57
RIPK4P57078 RPS26P15-201ENST00000488067 348 ntBASIC5.22□□□□□ -1.57
RIPK4P57078 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC5.22□□□□□ -1.57
RIPK4P57078 HNRNPKP5-201ENST00000515300 253 ntBASIC5.22□□□□□ -1.57
RIPK4P57078 IGKV3OR22-2-201ENST00000517943 313 ntBASIC5.22□□□□□ -1.57
RIPK4P57078 NDUFA5P2-201ENST00000519723 344 ntBASIC5.22□□□□□ -1.57
RIPK4P57078 IGLVIV-53-201ENST00000520107 367 ntBASIC5.22□□□□□ -1.57
RIPK4P57078 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC5.22□□□□□ -1.57
RIPK4P57078 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC5.22□□□□□ -1.57
RIPK4P57078 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC5.22□□□□□ -1.57
RIPK4P57078 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC5.22□□□□□ -1.57
RIPK4P57078 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC5.22□□□□□ -1.57
RIPK4P57078 AC106785.1-201ENST00000565935 262 ntBASIC5.22□□□□□ -1.57
RIPK4P57078 AL592436.1-201ENST00000605135 558 ntBASIC5.22□□□□□ -1.57
RIPK4P57078 AC012603.1-201ENST00000606424 528 ntBASIC5.22□□□□□ -1.57
RIPK4P57078 AL354950.1-201ENST00000614150 568 ntBASIC5.22□□□□□ -1.57
RIPK4P57078 AC074140.1-201ENST00000621617 208 ntBASIC5.22□□□□□ -1.57
RIPK4P57078 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.57
RIPK4P57078 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC5.21□□□□□ -1.57
RIPK4P57078 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RIPK4P57078 SNORA3C-201ENST00000408792 125 ntBASIC5.21□□□□□ -1.58
RIPK4P57078 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC5.21□□□□□ -1.58
RIPK4P57078 AL121578.1-201ENST00000428051 892 ntBASIC5.21□□□□□ -1.58
RIPK4P57078 NPM1P48-201ENST00000436002 853 ntBASIC5.21□□□□□ -1.58
RIPK4P57078 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC5.21□□□□□ -1.58
RIPK4P57078 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC5.21□□□□□ -1.58
RIPK4P57078 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC5.21□□□□□ -1.58
RIPK4P57078 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC5.21□□□□□ -1.58
RIPK4P57078 RNU7-157P-201ENST00000459600 66 ntBASIC5.21□□□□□ -1.58
RIPK4P57078 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC5.21□□□□□ -1.58
RIPK4P57078 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC5.21□□□□□ -1.58
RIPK4P57078 SNX6P1-201ENST00000601728 1224 ntBASIC5.21□□□□□ -1.58
RIPK4P57078 RNU6-84P-201ENST00000607737 102 ntBASIC5.21□□□□□ -1.58
RIPK4P57078 MIR4727-201ENST00000622232 55 ntBASIC5.21□□□□□ -1.58
RIPK4P57078 AC124312.6-202ENST00000623624 418 ntBASIC5.21□□□□□ -1.58
RIPK4P57078 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
RIPK4P57078 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC5.21□□□□□ -1.58
RIPK4P57078 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC5.21□□□□□ -1.58
RIPK4P57078 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC5.21□□□□□ -1.58
RIPK4P57078 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
RIPK4P57078 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.21□□□□□ -1.58
RIPK4P57078 ZNF962P-201ENST00000443465 3140 ntBASIC5.21□□□□□ -1.58
RIPK4P57078 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RIPK4P57078 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RIPK4P57078 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RIPK4P57078 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
RIPK4P57078 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms