Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 STMN1P2-201ENST00000508435 439 ntBASIC4.52□□□□□ -1.69
CDH13P55290 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.52□□□□□ -1.69
CDH13P55290 RNA5SP446-201ENST00000515955 82 ntBASIC4.52□□□□□ -1.69
CDH13P55290 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC4.52□□□□□ -1.69
CDH13P55290 OR5AZ1P-201ENST00000527448 943 ntBASIC4.52□□□□□ -1.69
CDH13P55290 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC4.52□□□□□ -1.69
CDH13P55290 RN7SL652P-201ENST00000577769 300 ntBASIC4.52□□□□□ -1.69
CDH13P55290 AC011487.3-201ENST00000593607 453 ntBASIC4.52□□□□□ -1.69
CDH13P55290 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.52□□□□□ -1.69
CDH13P55290 AP003117.1-201ENST00000602771 554 ntBASIC4.52□□□□□ -1.69
CDH13P55290 AC233280.2-201ENST00000603917 1070 ntBASIC4.52□□□□□ -1.69
CDH13P55290 BNIP3P4-201ENST00000604946 565 ntBASIC4.52□□□□□ -1.69
CDH13P55290 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC4.52□□□□□ -1.69
CDH13P55290 AL008729.2-201ENST00000606393 473 ntBASIC4.52□□□□□ -1.69
CDH13P55290 AC091979.2-201ENST00000607514 214 ntBASIC4.52□□□□□ -1.69
CDH13P55290 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC4.52□□□□□ -1.69
CDH13P55290 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC4.52□□□□□ -1.69
CDH13P55290 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
CDH13P55290 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
CDH13P55290 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.52□□□□□ -1.69
CDH13P55290 AL391684.1-202ENST00000641293 1636 ntBASIC4.52□□□□□ -1.69
CDH13P55290 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CDH13P55290 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.52□□□□□ -1.69
CDH13P55290 RARSP1-201ENST00000542842 1418 ntBASIC4.52□□□□□ -1.69
CDH13P55290 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CDH13P55290 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
CDH13P55290 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.52□□□□□ -1.69
CDH13P55290 AC119744.1-201ENST00000454746 1715 ntBASIC4.52□□□□□ -1.69
CDH13P55290 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CDH13P55290 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CDH13P55290 ASNSP1-204ENST00000641977 1664 ntBASIC4.51□□□□□ -1.69
CDH13P55290 CR788268.1-201ENST00000603931 1809 ntBASIC4.51□□□□□ -1.69
CDH13P55290 AC109780.1-201ENST00000451768 1344 ntBASIC4.51□□□□□ -1.69
CDH13P55290 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.51□□□□□ -1.69
CDH13P55290 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
CDH13P55290 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
CDH13P55290 RNU1-20P-201ENST00000363314 162 ntBASIC4.51□□□□□ -1.69
CDH13P55290 RNU6-236P-201ENST00000363886 106 ntBASIC4.51□□□□□ -1.69
CDH13P55290 RNU6-549P-201ENST00000384433 107 ntBASIC4.51□□□□□ -1.69
CDH13P55290 SNORA51.12-201ENST00000384448 134 ntBASIC4.51□□□□□ -1.69
CDH13P55290 RPL31P52-201ENST00000407532 367 ntBASIC4.51□□□□□ -1.69
CDH13P55290 DPPA2P3-201ENST00000411853 655 ntBASIC4.51□□□□□ -1.69
CDH13P55290 AC019050.1-201ENST00000418508 492 ntBASIC4.51□□□□□ -1.69
CDH13P55290 AC004074.1-201ENST00000421810 1063 ntBASIC4.51□□□□□ -1.69
CDH13P55290 AC246680.2-201ENST00000422106 389 ntBASIC4.51□□□□□ -1.69
CDH13P55290 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.51□□□□□ -1.69
CDH13P55290 AL592437.1-201ENST00000443781 492 ntBASIC4.51□□□□□ -1.69
CDH13P55290 AC073587.1-201ENST00000447093 876 ntBASIC4.51□□□□□ -1.69
CDH13P55290 AC108463.1-201ENST00000450258 347 ntBASIC4.51□□□□□ -1.69
CDH13P55290 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.51□□□□□ -1.69
CDH13P55290 OR52A4P-201ENST00000472867 958 ntBASIC4.51□□□□□ -1.69
CDH13P55290 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.51□□□□□ -1.69
CDH13P55290 AC147055.3-201ENST00000510547 851 ntBASIC4.51□□□□□ -1.69
CDH13P55290 AC010374.2-201ENST00000512933 535 ntBASIC4.51□□□□□ -1.69
CDH13P55290 RN7SKP283-201ENST00000517197 270 ntBASIC4.51□□□□□ -1.69
CDH13P55290 HMGB1P23-201ENST00000518743 568 ntBASIC4.51□□□□□ -1.69
CDH13P55290 AC010376.1-201ENST00000522101 334 ntBASIC4.51□□□□□ -1.69
CDH13P55290 LECT2-205ENST00000522943 574 ntTSL 3 BASIC4.51□□□□□ -1.69
CDH13P55290 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC4.51□□□□□ -1.69
CDH13P55290 CYCSP28-201ENST00000534284 321 ntBASIC4.51□□□□□ -1.69
CDH13P55290 HMGN2P6-201ENST00000551091 273 ntBASIC4.51□□□□□ -1.69
CDH13P55290 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC4.51□□□□□ -1.69
CDH13P55290 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
CDH13P55290 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC4.51□□□□□ -1.69
CDH13P55290 AC023824.3-201ENST00000569003 562 ntBASIC4.51□□□□□ -1.69
CDH13P55290 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CDH13P55290 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.51□□□□□ -1.69
CDH13P55290 AC087283.1-201ENST00000604029 1074 ntBASIC4.51□□□□□ -1.69
CDH13P55290 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CDH13P55290 AC018754.1-201ENST00000607486 925 ntBASIC4.51□□□□□ -1.69
CDH13P55290 AP003072.4-201ENST00000624580 310 ntBASIC4.51□□□□□ -1.69
CDH13P55290 AL356118.1-201ENST00000635272 1078 ntBASIC4.51□□□□□ -1.69
CDH13P55290 AL445984.1-201ENST00000637834 659 ntBASIC4.51□□□□□ -1.69
CDH13P55290 AC013437.2-201ENST00000639587 677 ntBASIC4.51□□□□□ -1.69
CDH13P55290 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
CDH13P55290 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
CDH13P55290 AC104118.1-201ENST00000607625 1589 ntBASIC4.51□□□□□ -1.69
CDH13P55290 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CDH13P55290 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
CDH13P55290 ZFRP1-201ENST00000457579 2970 ntBASIC4.5□□□□□ -1.69
CDH13P55290 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.5□□□□□ -1.69
CDH13P55290 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CDH13P55290 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
CDH13P55290 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.5□□□□□ -1.69
CDH13P55290 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.5□□□□□ -1.69
CDH13P55290 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
CDH13P55290 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CDH13P55290 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
CDH13P55290 SNORA51.8-201ENST00000384234 132 ntBASIC4.5□□□□□ -1.69
CDH13P55290 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
CDH13P55290 MIR1178-201ENST00000408396 91 ntBASIC4.5□□□□□ -1.69
CDH13P55290 VN1R51P-201ENST00000411675 945 ntBASIC4.5□□□□□ -1.69
CDH13P55290 VDAC1P9-201ENST00000412766 841 ntBASIC4.5□□□□□ -1.69
CDH13P55290 RPL23AP27-201ENST00000415161 451 ntBASIC4.5□□□□□ -1.69
CDH13P55290 AC007559.1-201ENST00000428736 355 ntBASIC4.5□□□□□ -1.69
CDH13P55290 RPL21P91-201ENST00000429231 479 ntBASIC4.5□□□□□ -1.69
CDH13P55290 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.5□□□□□ -1.69
CDH13P55290 CEACAMP7-201ENST00000444105 496 ntBASIC4.5□□□□□ -1.69
CDH13P55290 AL929288.2-201ENST00000446368 407 ntBASIC4.5□□□□□ -1.69
CDH13P55290 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms