Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.1□□□□□ -1.75
BRCA2P51587 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
BRCA2P51587 MBD5-201ENST00000404807 5920 ntTSL 5 BASIC4.1□□□□□ -1.75
BRCA2P51587 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.1□□□□□ -1.75
BRCA2P51587 FTLP6-201ENST00000355274 422 ntBASIC4.1□□□□□ -1.75
BRCA2P51587 SNORA48.8-201ENST00000391324 134 ntBASIC4.1□□□□□ -1.75
BRCA2P51587 RPA3-203ENST00000401447 414 ntTSL 3 BASIC4.1□□□□□ -1.75
BRCA2P51587 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.1□□□□□ -1.75
BRCA2P51587 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC4.1□□□□□ -1.75
BRCA2P51587 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.1□□□□□ -1.75
BRCA2P51587 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
BRCA2P51587 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.1□□□□□ -1.75
BRCA2P51587 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
BRCA2P51587 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC4.1□□□□□ -1.75
BRCA2P51587 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.1□□□□□ -1.75
BRCA2P51587 AC126323.6-202ENST00000568092 3511 ntBASIC4.1□□□□□ -1.75
BRCA2P51587 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.1□□□□□ -1.75
BRCA2P51587 AC016705.2-202ENST00000559008 6878 ntTSL 3 BASIC4.1□□□□□ -1.75
BRCA2P51587 HSPD1P14-201ENST00000432666 1618 ntBASIC4.1□□□□□ -1.75
BRCA2P51587 AC107083.1-201ENST00000439643 279 ntBASIC4.09□□□□□ -1.75
BRCA2P51587 AL645931.1-201ENST00000439737 410 ntBASIC4.09□□□□□ -1.75
BRCA2P51587 RPS26P2-201ENST00000440331 348 ntBASIC4.09□□□□□ -1.75
BRCA2P51587 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.09□□□□□ -1.75
BRCA2P51587 AC091544.4-201ENST00000555268 342 ntBASIC4.09□□□□□ -1.75
BRCA2P51587 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC4.09□□□□□ -1.75
BRCA2P51587 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
BRCA2P51587 KCNN3-201ENST00000271915 13033 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
BRCA2P51587 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
BRCA2P51587 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
BRCA2P51587 RBM23-203ENST00000359890 10040 ntAPPRIS P4 TSL 1 (best) BASIC4.09□□□□□ -1.75
BRCA2P51587 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
BRCA2P51587 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.09□□□□□ -1.75
BRCA2P51587 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.09□□□□□ -1.75
BRCA2P51587 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
BRCA2P51587 AC245054.1-201ENST00000420944 258 ntBASIC4.09□□□□□ -1.75
BRCA2P51587 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
BRCA2P51587 COTL1P1-201ENST00000422309 375 ntBASIC4.09□□□□□ -1.75
BRCA2P51587 AC093698.1-201ENST00000423843 571 ntBASIC4.09□□□□□ -1.75
BRCA2P51587 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
BRCA2P51587 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC4.09□□□□□ -1.75
BRCA2P51587 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.09□□□□□ -1.75
BRCA2P51587 SNORA70.17-201ENST00000516449 133 ntBASIC4.09□□□□□ -1.75
BRCA2P51587 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC4.09□□□□□ -1.75
BRCA2P51587 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC4.09□□□□□ -1.75
BRCA2P51587 AC027216.1-201ENST00000577726 685 ntBASIC4.09□□□□□ -1.75
BRCA2P51587 AC006116.10-201ENST00000591836 581 ntBASIC4.09□□□□□ -1.75
BRCA2P51587 AC026368.1-201ENST00000614934 690 ntBASIC4.09□□□□□ -1.75
BRCA2P51587 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
BRCA2P51587 MAP2-207ENST00000447185 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
BRCA2P51587 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
BRCA2P51587 AC000374.1-201ENST00000434698 1745 ntBASIC4.09□□□□□ -1.75
BRCA2P51587 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
BRCA2P51587 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
BRCA2P51587 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
BRCA2P51587 ALMS1-206ENST00000613296 12925 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.76
BRCA2P51587 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC4.09□□□□□ -1.76
BRCA2P51587 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC4.09□□□□□ -1.76
BRCA2P51587 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.09□□□□□ -1.76
BRCA2P51587 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.76
BRCA2P51587 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
BRCA2P51587 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.76
BRCA2P51587 AP003175.1-201ENST00000641383 6658 ntBASIC4.09□□□□□ -1.76
BRCA2P51587 AF117829.1-206ENST00000621883 3802 ntBASIC4.08□□□□□ -1.76
BRCA2P51587 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
BRCA2P51587 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
BRCA2P51587 ERMN-204ENST00000409925 556 ntTSL 4 BASIC4.08□□□□□ -1.76
BRCA2P51587 TRBV24OR9-2-201ENST00000416632 435 ntBASIC4.08□□□□□ -1.76
BRCA2P51587 HMGB1P37-201ENST00000439613 609 ntBASIC4.08□□□□□ -1.76
BRCA2P51587 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC4.08□□□□□ -1.76
BRCA2P51587 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC4.08□□□□□ -1.76
BRCA2P51587 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.08□□□□□ -1.76
BRCA2P51587 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
BRCA2P51587 AC007998.5-201ENST00000622938 237 ntBASIC4.08□□□□□ -1.76
BRCA2P51587 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
BRCA2P51587 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
BRCA2P51587 IGF1-206ENST00000456098 7370 ntTSL 5 BASIC4.08□□□□□ -1.76
BRCA2P51587 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
BRCA2P51587 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
BRCA2P51587 IKZF3-203ENST00000346872 9667 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
BRCA2P51587 PGBD4P8-201ENST00000412993 562 ntBASIC4.08□□□□□ -1.76
BRCA2P51587 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC4.08□□□□□ -1.76
BRCA2P51587 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.08□□□□□ -1.76
BRCA2P51587 AC108751.2-201ENST00000469993 231 ntBASIC4.08□□□□□ -1.76
BRCA2P51587 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.08□□□□□ -1.76
BRCA2P51587 AL121603.1-201ENST00000553815 142 ntBASIC4.08□□□□□ -1.76
BRCA2P51587 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC4.08□□□□□ -1.76
BRCA2P51587 AL049781.1-201ENST00000623195 3585 ntBASIC4.08□□□□□ -1.76
BRCA2P51587 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
BRCA2P51587 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC4.08□□□□□ -1.76
BRCA2P51587 VDAC1P9-201ENST00000412766 841 ntBASIC4.08□□□□□ -1.76
BRCA2P51587 BX890604.2-201ENST00000427883 474 ntBASIC4.08□□□□□ -1.76
BRCA2P51587 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC4.08□□□□□ -1.76
BRCA2P51587 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC4.08□□□□□ -1.76
BRCA2P51587 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.08□□□□□ -1.76
BRCA2P51587 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
BRCA2P51587 ADAMTS6-203ENST00000381055 7311 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
BRCA2P51587 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.07□□□□□ -1.76
BRCA2P51587 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC4.07□□□□□ -1.76
BRCA2P51587 RNU1-41P-201ENST00000516161 162 ntBASIC4.07□□□□□ -1.76
BRCA2P51587 RNU1-48P-201ENST00000516400 162 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms