Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 RPS15AP29-201ENST00000445539 400 ntBASIC4.13□□□□□ -1.75
HTTP42858 KC877373.1-201ENST00000479066 408 ntBASIC4.13□□□□□ -1.75
HTTP42858 AC127024.5-201ENST00000580085 462 ntBASIC4.13□□□□□ -1.75
HTTP42858 AC006116.10-201ENST00000591836 581 ntBASIC4.13□□□□□ -1.75
HTTP42858 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
HTTP42858 OR2A5-202ENST00000641693 8681 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
HTTP42858 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC4.13□□□□□ -1.75
HTTP42858 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
HTTP42858 AC138409.2-202ENST00000507274 458 ntBASIC4.12□□□□□ -1.75
HTTP42858 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
HTTP42858 AC105074.1-201ENST00000623380 3095 ntBASIC4.12□□□□□ -1.75
HTTP42858 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.12□□□□□ -1.75
HTTP42858 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
HTTP42858 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
HTTP42858 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
HTTP42858 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC4.12□□□□□ -1.75
HTTP42858 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC4.12□□□□□ -1.75
HTTP42858 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
HTTP42858 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
HTTP42858 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
HTTP42858 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.12□□□□□ -1.75
HTTP42858 DBIP2-201ENST00000419076 262 ntBASIC4.12□□□□□ -1.75
HTTP42858 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
HTTP42858 RPL7L1P13-201ENST00000511702 739 ntBASIC4.12□□□□□ -1.75
HTTP42858 AC007066.2-202ENST00000566531 914 ntBASIC4.12□□□□□ -1.75
HTTP42858 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.12□□□□□ -1.75
HTTP42858 AC084036.1-201ENST00000609190 508 ntBASIC4.12□□□□□ -1.75
HTTP42858 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC4.12□□□□□ -1.75
HTTP42858 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.12□□□□□ -1.75
HTTP42858 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
HTTP42858 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
HTTP42858 THAP12P5-201ENST00000405864 2275 ntBASIC4.12□□□□□ -1.75
HTTP42858 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC4.12□□□□□ -1.75
HTTP42858 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC4.12□□□□□ -1.75
HTTP42858 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
HTTP42858 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
HTTP42858 SRGAP2-203ENST00000573034 6301 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
HTTP42858 AC113192.3-201ENST00000529152 742 ntBASIC4.12□□□□□ -1.75
HTTP42858 AC104662.1-201ENST00000604448 511 ntBASIC4.12□□□□□ -1.75
HTTP42858 NIPBL-201ENST00000282516 10435 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
HTTP42858 FAM186A-201ENST00000327337 7127 ntAPPRIS P2 TSL 5 BASIC4.12□□□□□ -1.75
HTTP42858 SLC35A3-207ENST00000533028 14759 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
HTTP42858 AC000374.1-201ENST00000434698 1745 ntBASIC4.11□□□□□ -1.75
HTTP42858 LGSN-202ENST00000370658 5213 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
HTTP42858 TAF9BP1-201ENST00000396646 746 ntBASIC4.11□□□□□ -1.75
HTTP42858 GSTA8P-201ENST00000404253 637 ntBASIC4.11□□□□□ -1.75
HTTP42858 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC4.11□□□□□ -1.75
HTTP42858 SNORA71B-202ENST00000439232 272 ntBASIC4.11□□□□□ -1.75
HTTP42858 AC011611.1-201ENST00000552179 197 ntBASIC4.11□□□□□ -1.75
HTTP42858 AC016839.1-201ENST00000578162 867 ntBASIC4.11□□□□□ -1.75
HTTP42858 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC4.11□□□□□ -1.75
HTTP42858 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
HTTP42858 HYDIN2-203ENST00000614586 13885 ntBASIC4.11□□□□□ -1.75
HTTP42858 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
HTTP42858 TAF1-203ENST00000373790 7629 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
HTTP42858 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
HTTP42858 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
HTTP42858 DCX-208ENST00000636035 9269 ntAPPRIS ALT1 TSL 2 BASIC4.11□□□□□ -1.75
HTTP42858 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
HTTP42858 LAMA2-206ENST00000618192 9687 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
HTTP42858 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.11□□□□□ -1.75
HTTP42858 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
HTTP42858 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
HTTP42858 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
HTTP42858 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
HTTP42858 RPS23P10-201ENST00000416185 486 ntBASIC4.11□□□□□ -1.75
HTTP42858 AC245054.1-201ENST00000420944 258 ntBASIC4.11□□□□□ -1.75
HTTP42858 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC4.11□□□□□ -1.75
HTTP42858 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC4.11□□□□□ -1.75
HTTP42858 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC4.11□□□□□ -1.75
HTTP42858 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HTTP42858 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
HTTP42858 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
HTTP42858 FAM227A-205ENST00000535113 10322 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
HTTP42858 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
HTTP42858 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HTTP42858 PRELID3BP10-201ENST00000431957 584 ntBASIC4.1□□□□□ -1.75
HTTP42858 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
HTTP42858 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.1□□□□□ -1.75
HTTP42858 ODF2L-203ENST00000359242 7560 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
HTTP42858 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
HTTP42858 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.1□□□□□ -1.75
HTTP42858 AL034403.1-201ENST00000399414 885 ntBASIC4.1□□□□□ -1.75
HTTP42858 AL645931.1-201ENST00000439737 410 ntBASIC4.1□□□□□ -1.75
HTTP42858 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC4.1□□□□□ -1.75
HTTP42858 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
HTTP42858 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
HTTP42858 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
HTTP42858 AC119744.1-201ENST00000454746 1715 ntBASIC4.1□□□□□ -1.75
HTTP42858 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
HTTP42858 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC4.1□□□□□ -1.75
HTTP42858 GREM1-203ENST00000622074 14606 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
HTTP42858 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
HTTP42858 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
HTTP42858 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC4.1□□□□□ -1.75
HTTP42858 FGFR1OP-202ENST00000366847 14166 ntAPPRIS P4 TSL 1 (best) BASIC4.1□□□□□ -1.75
HTTP42858 RNU6-729P-201ENST00000384399 107 ntBASIC4.1□□□□□ -1.75
HTTP42858 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
HTTP42858 ERMN-204ENST00000409925 556 ntTSL 4 BASIC4.1□□□□□ -1.75
HTTP42858 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 491.7 ms