Protein–RNA interactions for Protein: P14543

NID1, Nidogen-1, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NID1P14543 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC6.14□□□□□ -1.43
NID1P14543 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC6.14□□□□□ -1.43
NID1P14543 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC6.14□□□□□ -1.43
NID1P14543 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC6.14□□□□□ -1.43
NID1P14543 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC6.14□□□□□ -1.43
NID1P14543 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC6.14□□□□□ -1.43
NID1P14543 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC6.14□□□□□ -1.43
NID1P14543 AL390240.1-201ENST00000612950 384 ntBASIC6.14□□□□□ -1.43
NID1P14543 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
NID1P14543 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC6.14□□□□□ -1.43
NID1P14543 TNPO1P2-201ENST00000426249 2665 ntBASIC6.14□□□□□ -1.43
NID1P14543 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
NID1P14543 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
NID1P14543 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
NID1P14543 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
NID1P14543 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
NID1P14543 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
NID1P14543 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC6.14□□□□□ -1.43
NID1P14543 AC112243.1-201ENST00000623949 3851 ntBASIC6.14□□□□□ -1.43
NID1P14543 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
NID1P14543 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC6.14□□□□□ -1.43
NID1P14543 ASNSP1-204ENST00000641977 1664 ntBASIC6.14□□□□□ -1.43
NID1P14543 KCNMB3P1-202ENST00000493696 3389 ntBASIC6.14□□□□□ -1.43
NID1P14543 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC6.13□□□□□ -1.43
NID1P14543 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
NID1P14543 AC005034.3-201ENST00000604845 1747 ntBASIC6.13□□□□□ -1.43
NID1P14543 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
NID1P14543 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
NID1P14543 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
NID1P14543 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
NID1P14543 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC6.13□□□□□ -1.43
NID1P14543 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
NID1P14543 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.43
NID1P14543 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
NID1P14543 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC6.13□□□□□ -1.43
NID1P14543 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
NID1P14543 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC6.13□□□□□ -1.43
NID1P14543 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
NID1P14543 Y_RNA.148-201ENST00000363557 117 ntBASIC6.13□□□□□ -1.43
NID1P14543 RN7SKP191-201ENST00000364713 306 ntBASIC6.13□□□□□ -1.43
NID1P14543 RN7SKP130-201ENST00000364924 301 ntBASIC6.13□□□□□ -1.43
NID1P14543 RNU6-108P-201ENST00000365558 107 ntBASIC6.13□□□□□ -1.43
NID1P14543 AC092634.1-201ENST00000366505 199 ntBASIC6.13□□□□□ -1.43
NID1P14543 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
NID1P14543 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC6.13□□□□□ -1.43
NID1P14543 RNU1-46P-201ENST00000384425 164 ntBASIC6.13□□□□□ -1.43
NID1P14543 SUMO3-202ENST00000397893 520 ntTSL 2 BASIC6.13□□□□□ -1.43
NID1P14543 AL583835.1-201ENST00000399570 407 ntBASIC6.13□□□□□ -1.43
NID1P14543 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC6.13□□□□□ -1.43
NID1P14543 Y_RNA.615-201ENST00000410769 117 ntBASIC6.13□□□□□ -1.43
NID1P14543 RN7SKP205-201ENST00000410999 307 ntBASIC6.13□□□□□ -1.43
NID1P14543 AL357752.1-201ENST00000412817 349 ntBASIC6.13□□□□□ -1.43
NID1P14543 AL807761.1-201ENST00000417622 171 ntBASIC6.13□□□□□ -1.43
NID1P14543 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC6.13□□□□□ -1.43
NID1P14543 SPATA20P1-201ENST00000423089 438 ntBASIC6.13□□□□□ -1.43
NID1P14543 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
NID1P14543 RPS3AP52-201ENST00000435639 297 ntBASIC6.13□□□□□ -1.43
NID1P14543 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC6.13□□□□□ -1.43
NID1P14543 RPS15AP9-201ENST00000439856 381 ntBASIC6.13□□□□□ -1.43
NID1P14543 TXNP5-201ENST00000441043 315 ntBASIC6.13□□□□□ -1.43
NID1P14543 SNRPBP1-201ENST00000443634 282 ntBASIC6.13□□□□□ -1.43
NID1P14543 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC6.13□□□□□ -1.43
NID1P14543 AL935212.3-201ENST00000450729 284 ntBASIC6.13□□□□□ -1.43
NID1P14543 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC6.13□□□□□ -1.43
NID1P14543 RPS24P6-201ENST00000452670 400 ntBASIC6.13□□□□□ -1.43
NID1P14543 RPL31P11-202ENST00000454082 372 ntBASIC6.13□□□□□ -1.43
NID1P14543 UCK2-205ENST00000469256 753 ntTSL 3 BASIC6.13□□□□□ -1.43
NID1P14543 RPS27P23-201ENST00000487608 251 ntBASIC6.13□□□□□ -1.43
NID1P14543 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC6.13□□□□□ -1.43
NID1P14543 AC025164.1-201ENST00000496249 478 ntBASIC6.13□□□□□ -1.43
NID1P14543 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC6.13□□□□□ -1.43
NID1P14543 AC025674.1-201ENST00000507074 324 ntBASIC6.13□□□□□ -1.43
NID1P14543 TTC39CP1-201ENST00000512513 755 ntBASIC6.13□□□□□ -1.43
NID1P14543 RNU6-201P-201ENST00000517100 61 ntBASIC6.13□□□□□ -1.43
NID1P14543 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC6.13□□□□□ -1.43
NID1P14543 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
NID1P14543 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
NID1P14543 OR8A2P-201ENST00000528631 952 ntBASIC6.13□□□□□ -1.43
NID1P14543 OR4R1P-201ENST00000529879 463 ntBASIC6.13□□□□□ -1.43
NID1P14543 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC6.13□□□□□ -1.43
NID1P14543 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC6.13□□□□□ -1.43
NID1P14543 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC6.13□□□□□ -1.43
NID1P14543 AC027667.1-201ENST00000545814 304 ntBASIC6.13□□□□□ -1.43
NID1P14543 AL121579.2-201ENST00000555466 590 ntBASIC6.13□□□□□ -1.43
NID1P14543 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC6.13□□□□□ -1.43
NID1P14543 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC6.13□□□□□ -1.43
NID1P14543 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC6.13□□□□□ -1.43
NID1P14543 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC6.13□□□□□ -1.43
NID1P14543 MIR5186-201ENST00000577504 120 ntBASIC6.13□□□□□ -1.43
NID1P14543 PPIAP14-201ENST00000577627 496 ntBASIC6.13□□□□□ -1.43
NID1P14543 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC6.13□□□□□ -1.43
NID1P14543 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC6.13□□□□□ -1.43
NID1P14543 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC6.13□□□□□ -1.43
NID1P14543 AC008782.1-201ENST00000603386 430 ntBASIC6.13□□□□□ -1.43
NID1P14543 AC097467.4-201ENST00000605504 141 ntBASIC6.13□□□□□ -1.43
NID1P14543 AC005899.7-201ENST00000618199 588 ntBASIC6.13□□□□□ -1.43
NID1P14543 AC018926.3-201ENST00000618841 406 ntBASIC6.13□□□□□ -1.43
NID1P14543 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC6.13□□□□□ -1.43
NID1P14543 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
NID1P14543 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 124 ms