Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 AC084824.1-201ENST00000550917 1005 ntBASIC4.57□□□□□ -1.68
MSH4O15457 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC4.57□□□□□ -1.68
MSH4O15457 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC4.57□□□□□ -1.68
MSH4O15457 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.57□□□□□ -1.68
MSH4O15457 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC4.57□□□□□ -1.68
MSH4O15457 AL596275.2-204ENST00000641628 552 ntBASIC4.57□□□□□ -1.68
MSH4O15457 AL596275.2-206ENST00000641957 626 ntBASIC4.57□□□□□ -1.68
MSH4O15457 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
MSH4O15457 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
MSH4O15457 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
MSH4O15457 IQCB2P-201ENST00000401788 1633 ntBASIC4.57□□□□□ -1.68
MSH4O15457 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
MSH4O15457 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
MSH4O15457 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
MSH4O15457 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC4.56□□□□□ -1.68
MSH4O15457 RNU6-819P-201ENST00000364116 107 ntBASIC4.56□□□□□ -1.68
MSH4O15457 RPL5P19-201ENST00000404228 893 ntBASIC4.56□□□□□ -1.68
MSH4O15457 DHFRP5-201ENST00000406944 564 ntBASIC4.56□□□□□ -1.68
MSH4O15457 AC093084.1-201ENST00000424233 687 ntBASIC4.56□□□□□ -1.68
MSH4O15457 BUD31P2-201ENST00000449374 300 ntBASIC4.56□□□□□ -1.68
MSH4O15457 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.56□□□□□ -1.68
MSH4O15457 RNU6-775P-201ENST00000459318 96 ntBASIC4.56□□□□□ -1.68
MSH4O15457 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.56□□□□□ -1.68
MSH4O15457 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
MSH4O15457 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.56□□□□□ -1.68
MSH4O15457 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.56□□□□□ -1.68
MSH4O15457 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC4.56□□□□□ -1.68
MSH4O15457 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.56□□□□□ -1.68
MSH4O15457 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC4.56□□□□□ -1.68
MSH4O15457 AL451044.1-201ENST00000604867 238 ntBASIC4.56□□□□□ -1.68
MSH4O15457 AC007620.3-201ENST00000608131 497 ntBASIC4.56□□□□□ -1.68
MSH4O15457 AC095038.2-201ENST00000621464 1070 ntBASIC4.56□□□□□ -1.68
MSH4O15457 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.56□□□□□ -1.68
MSH4O15457 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.56□□□□□ -1.68
MSH4O15457 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
MSH4O15457 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.56□□□□□ -1.68
MSH4O15457 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
MSH4O15457 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.56□□□□□ -1.68
MSH4O15457 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.55□□□□□ -1.68
MSH4O15457 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
MSH4O15457 RNA5SP388-201ENST00000362584 119 ntBASIC4.55□□□□□ -1.68
MSH4O15457 RNU6-1251P-201ENST00000364502 107 ntBASIC4.55□□□□□ -1.68
MSH4O15457 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
MSH4O15457 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
MSH4O15457 AC244453.4-201ENST00000419150 388 ntBASIC4.55□□□□□ -1.68
MSH4O15457 MTCYBP7-201ENST00000419540 1134 ntBASIC4.55□□□□□ -1.68
MSH4O15457 AL691449.1-201ENST00000426570 421 ntBASIC4.55□□□□□ -1.68
MSH4O15457 MTCO1P45-201ENST00000431457 267 ntBASIC4.55□□□□□ -1.68
MSH4O15457 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.55□□□□□ -1.68
MSH4O15457 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC4.55□□□□□ -1.68
MSH4O15457 AL591623.2-201ENST00000449978 222 ntBASIC4.55□□□□□ -1.68
MSH4O15457 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.55□□□□□ -1.68
MSH4O15457 LARP7P4-201ENST00000481075 878 ntBASIC4.55□□□□□ -1.68
MSH4O15457 TPT1P3-201ENST00000492841 512 ntBASIC4.55□□□□□ -1.68
MSH4O15457 AC025554.1-201ENST00000505641 188 ntBASIC4.55□□□□□ -1.68
MSH4O15457 SNORA70.17-201ENST00000516449 133 ntBASIC4.55□□□□□ -1.68
MSH4O15457 IFITM8P-201ENST00000522529 394 ntBASIC4.55□□□□□ -1.68
MSH4O15457 RGS5-218ENST00000526176 574 ntTSL 4 BASIC4.55□□□□□ -1.68
MSH4O15457 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC4.55□□□□□ -1.68
MSH4O15457 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC4.55□□□□□ -1.68
MSH4O15457 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.55□□□□□ -1.68
MSH4O15457 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC4.55□□□□□ -1.68
MSH4O15457 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC4.55□□□□□ -1.68
MSH4O15457 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.55□□□□□ -1.68
MSH4O15457 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.55□□□□□ -1.68
MSH4O15457 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC4.55□□□□□ -1.68
MSH4O15457 VN1R85P-201ENST00000601587 426 ntBASIC4.55□□□□□ -1.68
MSH4O15457 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC4.55□□□□□ -1.68
MSH4O15457 AL133370.2-201ENST00000619934 439 ntBASIC4.55□□□□□ -1.68
MSH4O15457 BANCR-201ENST00000624238 473 ntTSL 2 BASIC4.55□□□□□ -1.68
MSH4O15457 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC4.55□□□□□ -1.68
MSH4O15457 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
MSH4O15457 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
MSH4O15457 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.55□□□□□ -1.68
MSH4O15457 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.55□□□□□ -1.68
MSH4O15457 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
MSH4O15457 AC091046.3-201ENST00000631455 1574 ntBASIC4.54□□□□□ -1.68
MSH4O15457 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
MSH4O15457 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.54□□□□□ -1.68
MSH4O15457 OR51A6P-201ENST00000418680 1004 ntBASIC4.54□□□□□ -1.68
MSH4O15457 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
MSH4O15457 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.54□□□□□ -1.68
MSH4O15457 AC069277.2-201ENST00000454211 432 ntBASIC4.54□□□□□ -1.68
MSH4O15457 HNRNPDLP3-201ENST00000456745 380 ntBASIC4.54□□□□□ -1.68
MSH4O15457 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.54□□□□□ -1.68
MSH4O15457 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
MSH4O15457 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.54□□□□□ -1.68
MSH4O15457 PANCR-201ENST00000503456 493 ntTSL 5 BASIC4.54□□□□□ -1.68
MSH4O15457 AC017037.1-201ENST00000508460 471 ntBASIC4.54□□□□□ -1.68
MSH4O15457 RPS27AP18-201ENST00000515536 459 ntBASIC4.54□□□□□ -1.68
MSH4O15457 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC4.54□□□□□ -1.68
MSH4O15457 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC4.54□□□□□ -1.68
MSH4O15457 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.54□□□□□ -1.68
MSH4O15457 SNX6P1-201ENST00000601728 1224 ntBASIC4.54□□□□□ -1.68
MSH4O15457 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.54□□□□□ -1.68
MSH4O15457 AC024941.1-201ENST00000612250 334 ntBASIC4.54□□□□□ -1.68
MSH4O15457 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.54□□□□□ -1.68
MSH4O15457 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.54□□□□□ -1.68
MSH4O15457 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.54□□□□□ -1.68
MSH4O15457 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 340.1 ms