Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 AC093698.1-201ENST00000423843 571 ntBASIC3.37□□□□□ -1.87
RBFOX3A6NFN3 IFNNP1-201ENST00000429219 553 ntBASIC3.37□□□□□ -1.87
RBFOX3A6NFN3 MTCO1P54-201ENST00000430139 712 ntBASIC3.37□□□□□ -1.87
RBFOX3A6NFN3 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
RBFOX3A6NFN3 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.37□□□□□ -1.87
RBFOX3A6NFN3 RPS26P40-201ENST00000435209 294 ntBASIC3.37□□□□□ -1.87
RBFOX3A6NFN3 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC3.37□□□□□ -1.87
RBFOX3A6NFN3 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC3.37□□□□□ -1.87
RBFOX3A6NFN3 AL627224.1-201ENST00000448334 444 ntBASIC3.37□□□□□ -1.87
RBFOX3A6NFN3 OR1H1P-201ENST00000448731 937 ntBASIC3.37□□□□□ -1.87
RBFOX3A6NFN3 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC3.37□□□□□ -1.87
RBFOX3A6NFN3 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC3.37□□□□□ -1.87
RBFOX3A6NFN3 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC3.37□□□□□ -1.87
RBFOX3A6NFN3 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC3.37□□□□□ -1.87
RBFOX3A6NFN3 RN7SL93P-201ENST00000463035 293 ntBASIC3.37□□□□□ -1.87
RBFOX3A6NFN3 RPS27AP17-201ENST00000463344 455 ntBASIC3.37□□□□□ -1.87
RBFOX3A6NFN3 RN7SL329P-201ENST00000467740 299 ntBASIC3.37□□□□□ -1.87
RBFOX3A6NFN3 AP000926.1-201ENST00000479573 241 ntBASIC3.37□□□□□ -1.87
RBFOX3A6NFN3 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC3.37□□□□□ -1.87
RBFOX3A6NFN3 OR4V1P-201ENST00000525394 1140 ntBASIC3.37□□□□□ -1.87
RBFOX3A6NFN3 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.37□□□□□ -1.87
RBFOX3A6NFN3 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC3.37□□□□□ -1.87
RBFOX3A6NFN3 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC3.37□□□□□ -1.87
RBFOX3A6NFN3 RFPL1S-203ENST00000539579 330 ntBASIC3.37□□□□□ -1.87
RBFOX3A6NFN3 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC3.37□□□□□ -1.87
RBFOX3A6NFN3 AC027176.2-201ENST00000559166 746 ntBASIC3.37□□□□□ -1.87
RBFOX3A6NFN3 MIR4458-201ENST00000578872 75 ntBASIC3.37□□□□□ -1.87
RBFOX3A6NFN3 MIR4646-201ENST00000580775 63 ntBASIC3.37□□□□□ -1.87
RBFOX3A6NFN3 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.37□□□□□ -1.87
RBFOX3A6NFN3 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC3.37□□□□□ -1.87
RBFOX3A6NFN3 MRPS35P3-201ENST00000603189 709 ntBASIC3.37□□□□□ -1.87
RBFOX3A6NFN3 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC3.37□□□□□ -1.87
RBFOX3A6NFN3 AC093799.2-201ENST00000610062 578 ntBASIC3.37□□□□□ -1.87
RBFOX3A6NFN3 MIR7973-1-201ENST00000614683 76 ntBASIC3.37□□□□□ -1.87
RBFOX3A6NFN3 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
RBFOX3A6NFN3 AL645927.2-201ENST00000618350 349 ntBASIC3.37□□□□□ -1.87
RBFOX3A6NFN3 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
RBFOX3A6NFN3 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.37□□□□□ -1.87
RBFOX3A6NFN3 AC244205.2-202ENST00000635781 342 ntBASIC3.37□□□□□ -1.87
RBFOX3A6NFN3 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.37□□□□□ -1.87
RBFOX3A6NFN3 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
RBFOX3A6NFN3 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC3.37□□□□□ -1.87
RBFOX3A6NFN3 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC3.37□□□□□ -1.87
RBFOX3A6NFN3 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
RBFOX3A6NFN3 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.37□□□□□ -1.87
RBFOX3A6NFN3 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.37□□□□□ -1.87
RBFOX3A6NFN3 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.37□□□□□ -1.87
RBFOX3A6NFN3 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
RBFOX3A6NFN3 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
RBFOX3A6NFN3 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.36□□□□□ -1.87
RBFOX3A6NFN3 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
RBFOX3A6NFN3 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
RBFOX3A6NFN3 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC3.36□□□□□ -1.87
RBFOX3A6NFN3 SNORA62.2-201ENST00000364672 152 ntBASIC3.36□□□□□ -1.87
RBFOX3A6NFN3 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
RBFOX3A6NFN3 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
RBFOX3A6NFN3 IL6-206ENST00000407492 926 ntTSL 3 BASIC3.36□□□□□ -1.87
RBFOX3A6NFN3 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC3.36□□□□□ -1.87
RBFOX3A6NFN3 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
RBFOX3A6NFN3 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.36□□□□□ -1.87
RBFOX3A6NFN3 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
RBFOX3A6NFN3 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.36□□□□□ -1.87
RBFOX3A6NFN3 OR2B7P-201ENST00000429302 934 ntBASIC3.36□□□□□ -1.87
RBFOX3A6NFN3 VDAC1P6-201ENST00000430062 855 ntBASIC3.36□□□□□ -1.87
RBFOX3A6NFN3 AL049745.1-201ENST00000433953 286 ntBASIC3.36□□□□□ -1.87
RBFOX3A6NFN3 AC096638.2-201ENST00000434965 711 ntBASIC3.36□□□□□ -1.87
RBFOX3A6NFN3 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.36□□□□□ -1.87
RBFOX3A6NFN3 AC009263.1-201ENST00000441193 1239 ntBASIC3.36□□□□□ -1.87
RBFOX3A6NFN3 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
RBFOX3A6NFN3 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC3.36□□□□□ -1.87
RBFOX3A6NFN3 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC3.36□□□□□ -1.87
RBFOX3A6NFN3 HMGB1P26-201ENST00000452520 628 ntBASIC3.36□□□□□ -1.87
RBFOX3A6NFN3 AURKAPS2-201ENST00000454983 333 ntBASIC3.36□□□□□ -1.87
RBFOX3A6NFN3 AC090114.3-201ENST00000479267 829 ntBASIC3.36□□□□□ -1.87
RBFOX3A6NFN3 RPL31P61-201ENST00000496160 376 ntBASIC3.36□□□□□ -1.87
RBFOX3A6NFN3 AC140172.1-201ENST00000502928 141 ntBASIC3.36□□□□□ -1.87
RBFOX3A6NFN3 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC3.36□□□□□ -1.87
RBFOX3A6NFN3 IGKV2D-10-201ENST00000520194 281 ntBASIC3.36□□□□□ -1.87
RBFOX3A6NFN3 AC022790.1-201ENST00000522872 204 ntBASIC3.36□□□□□ -1.87
RBFOX3A6NFN3 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
RBFOX3A6NFN3 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC3.36□□□□□ -1.87
RBFOX3A6NFN3 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC3.36□□□□□ -1.87
RBFOX3A6NFN3 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.36□□□□□ -1.87
RBFOX3A6NFN3 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.36□□□□□ -1.87
RBFOX3A6NFN3 AL034351.1-201ENST00000605288 668 ntBASIC3.36□□□□□ -1.87
RBFOX3A6NFN3 AC055764.2-201ENST00000610089 670 ntBASIC3.36□□□□□ -1.87
RBFOX3A6NFN3 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
RBFOX3A6NFN3 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC3.36□□□□□ -1.87
RBFOX3A6NFN3 uc_338.32-201ENST00000615087 172 ntBASIC3.36□□□□□ -1.87
RBFOX3A6NFN3 AC068870.2-201ENST00000620635 389 ntBASIC3.36□□□□□ -1.87
RBFOX3A6NFN3 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC3.36□□□□□ -1.87
RBFOX3A6NFN3 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC3.36□□□□□ -1.87
RBFOX3A6NFN3 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC3.36□□□□□ -1.87
RBFOX3A6NFN3 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.36□□□□□ -1.87
RBFOX3A6NFN3 AC009452.1-201ENST00000640823 606 ntBASIC3.36□□□□□ -1.87
RBFOX3A6NFN3 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC3.36□□□□□ -1.87
RBFOX3A6NFN3 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
RBFOX3A6NFN3 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
RBFOX3A6NFN3 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
RBFOX3A6NFN3 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms