Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC5.9□□□□□ -1.46
COL4A3BPQ9Y5P4 APPL2-203ENST00000546731 684 ntTSL 2 BASIC5.9□□□□□ -1.46
COL4A3BPQ9Y5P4 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC5.9□□□□□ -1.46
COL4A3BPQ9Y5P4 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC5.9□□□□□ -1.46
COL4A3BPQ9Y5P4 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC5.9□□□□□ -1.46
COL4A3BPQ9Y5P4 AC133552.5-201ENST00000604266 540 ntBASIC5.9□□□□□ -1.46
COL4A3BPQ9Y5P4 AL021707.7-201ENST00000607991 416 ntBASIC5.9□□□□□ -1.46
COL4A3BPQ9Y5P4 AL121612.2-201ENST00000612261 482 ntBASIC5.9□□□□□ -1.46
COL4A3BPQ9Y5P4 AC090246.1-201ENST00000616499 426 ntBASIC5.9□□□□□ -1.46
COL4A3BPQ9Y5P4 AC037198.3-201ENST00000616754 526 ntBASIC5.9□□□□□ -1.46
COL4A3BPQ9Y5P4 AC073348.1-201ENST00000623002 331 ntBASIC5.9□□□□□ -1.46
COL4A3BPQ9Y5P4 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC5.9□□□□□ -1.46
COL4A3BPQ9Y5P4 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.9□□□□□ -1.47
COL4A3BPQ9Y5P4 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.9□□□□□ -1.47
COL4A3BPQ9Y5P4 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
COL4A3BPQ9Y5P4 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.9□□□□□ -1.47
COL4A3BPQ9Y5P4 AC107982.1-201ENST00000507171 1300 ntBASIC5.9□□□□□ -1.47
COL4A3BPQ9Y5P4 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
COL4A3BPQ9Y5P4 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.47
COL4A3BPQ9Y5P4 AC104454.1-201ENST00000421341 1401 ntBASIC5.9□□□□□ -1.47
COL4A3BPQ9Y5P4 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.9□□□□□ -1.47
COL4A3BPQ9Y5P4 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
COL4A3BPQ9Y5P4 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.47
COL4A3BPQ9Y5P4 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.9□□□□□ -1.47
COL4A3BPQ9Y5P4 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
COL4A3BPQ9Y5P4 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
COL4A3BPQ9Y5P4 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
COL4A3BPQ9Y5P4 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
COL4A3BPQ9Y5P4 AL022311.1-201ENST00000623726 19416 ntBASIC5.89□□□□□ -1.47
COL4A3BPQ9Y5P4 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
COL4A3BPQ9Y5P4 ERCC6-202ENST00000374127 1782 ntBASIC5.89□□□□□ -1.47
COL4A3BPQ9Y5P4 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
COL4A3BPQ9Y5P4 OR9G4-201ENST00000302957 984 ntBASIC5.89□□□□□ -1.47
COL4A3BPQ9Y5P4 RPL23P2-201ENST00000320371 421 ntBASIC5.89□□□□□ -1.47
COL4A3BPQ9Y5P4 RNU6-251P-201ENST00000363235 104 ntBASIC5.89□□□□□ -1.47
COL4A3BPQ9Y5P4 RNA5SP223-201ENST00000365174 120 ntBASIC5.89□□□□□ -1.47
COL4A3BPQ9Y5P4 OR1L6-202ENST00000373684 1044 ntBASIC5.89□□□□□ -1.47
COL4A3BPQ9Y5P4 SNORA70-201ENST00000384436 135 ntBASIC5.89□□□□□ -1.47
COL4A3BPQ9Y5P4 MIR105-1-201ENST00000385222 81 ntBASIC5.89□□□□□ -1.47
COL4A3BPQ9Y5P4 EIF4A1P3-201ENST00000411521 244 ntBASIC5.89□□□□□ -1.47
COL4A3BPQ9Y5P4 RBMY2KP-201ENST00000418221 992 ntBASIC5.89□□□□□ -1.47
COL4A3BPQ9Y5P4 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
COL4A3BPQ9Y5P4 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC5.89□□□□□ -1.47
COL4A3BPQ9Y5P4 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC5.89□□□□□ -1.47
COL4A3BPQ9Y5P4 RPS6P15-201ENST00000431996 751 ntBASIC5.89□□□□□ -1.47
COL4A3BPQ9Y5P4 AL050321.1-201ENST00000432363 400 ntBASIC5.89□□□□□ -1.47
COL4A3BPQ9Y5P4 AC090018.1-201ENST00000434369 367 ntBASIC5.89□□□□□ -1.47
COL4A3BPQ9Y5P4 RPL5P25-201ENST00000441148 775 ntBASIC5.89□□□□□ -1.47
COL4A3BPQ9Y5P4 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC5.89□□□□□ -1.47
COL4A3BPQ9Y5P4 AC104634.1-201ENST00000452720 462 ntBASIC5.89□□□□□ -1.47
COL4A3BPQ9Y5P4 AL389915.2-201ENST00000454576 441 ntBASIC5.89□□□□□ -1.47
COL4A3BPQ9Y5P4 MTND1P16-201ENST00000465177 898 ntBASIC5.89□□□□□ -1.47
COL4A3BPQ9Y5P4 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC5.89□□□□□ -1.47
COL4A3BPQ9Y5P4 RPS18P6-201ENST00000476880 458 ntBASIC5.89□□□□□ -1.47
COL4A3BPQ9Y5P4 SNX5P1-201ENST00000505757 1041 ntBASIC5.89□□□□□ -1.47
COL4A3BPQ9Y5P4 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC5.89□□□□□ -1.47
COL4A3BPQ9Y5P4 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC5.89□□□□□ -1.47
COL4A3BPQ9Y5P4 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
COL4A3BPQ9Y5P4 AC098976.1-201ENST00000513014 541 ntBASIC5.89□□□□□ -1.47
COL4A3BPQ9Y5P4 RNU6-1261P-201ENST00000517194 104 ntBASIC5.89□□□□□ -1.47
COL4A3BPQ9Y5P4 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.89□□□□□ -1.47
COL4A3BPQ9Y5P4 CA1-215ENST00000522389 551 ntTSL 3 BASIC5.89□□□□□ -1.47
COL4A3BPQ9Y5P4 AC022832.1-201ENST00000530718 645 ntBASIC5.89□□□□□ -1.47
COL4A3BPQ9Y5P4 PDCL2P2-201ENST00000533651 189 ntBASIC5.89□□□□□ -1.47
COL4A3BPQ9Y5P4 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.89□□□□□ -1.47
COL4A3BPQ9Y5P4 OR11J2P-201ENST00000555298 907 ntBASIC5.89□□□□□ -1.47
COL4A3BPQ9Y5P4 AC090888.2-201ENST00000559765 1144 ntBASIC5.89□□□□□ -1.47
COL4A3BPQ9Y5P4 AC044860.2-201ENST00000561005 179 ntBASIC5.89□□□□□ -1.47
COL4A3BPQ9Y5P4 AC138915.2-201ENST00000569776 97 ntBASIC5.89□□□□□ -1.47
COL4A3BPQ9Y5P4 AC092954.1-201ENST00000609121 445 ntBASIC5.89□□□□□ -1.47
COL4A3BPQ9Y5P4 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC5.89□□□□□ -1.47
COL4A3BPQ9Y5P4 AC091304.6-201ENST00000619761 202 ntBASIC5.89□□□□□ -1.47
COL4A3BPQ9Y5P4 AC120349.3-201ENST00000624377 529 ntBASIC5.89□□□□□ -1.47
COL4A3BPQ9Y5P4 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
COL4A3BPQ9Y5P4 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
COL4A3BPQ9Y5P4 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
COL4A3BPQ9Y5P4 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
COL4A3BPQ9Y5P4 CDR1-202ENST00000625883 1485 ntBASIC5.89□□□□□ -1.47
COL4A3BPQ9Y5P4 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
COL4A3BPQ9Y5P4 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.89□□□□□ -1.47
COL4A3BPQ9Y5P4 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC5.89□□□□□ -1.47
COL4A3BPQ9Y5P4 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
COL4A3BPQ9Y5P4 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
COL4A3BPQ9Y5P4 MTND5P28-201ENST00000438005 1594 ntBASIC5.89□□□□□ -1.47
COL4A3BPQ9Y5P4 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
COL4A3BPQ9Y5P4 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
COL4A3BPQ9Y5P4 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
COL4A3BPQ9Y5P4 OFD1P5Y-201ENST00000447585 2590 ntBASIC5.88□□□□□ -1.47
COL4A3BPQ9Y5P4 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.88□□□□□ -1.47
COL4A3BPQ9Y5P4 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.88□□□□□ -1.47
COL4A3BPQ9Y5P4 Y_RNA.25-201ENST00000362528 102 ntBASIC5.88□□□□□ -1.47
COL4A3BPQ9Y5P4 SNORD113-6-201ENST00000363345 75 ntBASIC5.88□□□□□ -1.47
COL4A3BPQ9Y5P4 U8.4-201ENST00000363626 134 ntBASIC5.88□□□□□ -1.47
COL4A3BPQ9Y5P4 RNU1-85P-201ENST00000364127 164 ntBASIC5.88□□□□□ -1.47
COL4A3BPQ9Y5P4 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
COL4A3BPQ9Y5P4 RPL7P53-201ENST00000421245 739 ntBASIC5.88□□□□□ -1.47
COL4A3BPQ9Y5P4 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.88□□□□□ -1.47
COL4A3BPQ9Y5P4 MRPS21P2-201ENST00000424704 264 ntBASIC5.88□□□□□ -1.47
COL4A3BPQ9Y5P4 AC096632.1-201ENST00000427395 310 ntBASIC5.88□□□□□ -1.47
COL4A3BPQ9Y5P4 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms