Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
TRIM4Q9C037 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.37□□□□□ -1.71
TRIM4Q9C037 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.37□□□□□ -1.71
TRIM4Q9C037 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
TRIM4Q9C037 AL607077.1-201ENST00000401718 499 ntBASIC4.37□□□□□ -1.71
TRIM4Q9C037 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
TRIM4Q9C037 DPY19L1P2-201ENST00000426647 915 ntBASIC4.37□□□□□ -1.71
TRIM4Q9C037 AL132765.1-201ENST00000434165 553 ntBASIC4.37□□□□□ -1.71
TRIM4Q9C037 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC4.37□□□□□ -1.71
TRIM4Q9C037 BTG3P1-201ENST00000435859 716 ntBASIC4.37□□□□□ -1.71
TRIM4Q9C037 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC4.37□□□□□ -1.71
TRIM4Q9C037 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
TRIM4Q9C037 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.37□□□□□ -1.71
TRIM4Q9C037 AC239798.3-201ENST00000454459 408 ntBASIC4.37□□□□□ -1.71
TRIM4Q9C037 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.37□□□□□ -1.71
TRIM4Q9C037 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.37□□□□□ -1.71
TRIM4Q9C037 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC4.37□□□□□ -1.71
TRIM4Q9C037 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.37□□□□□ -1.71
TRIM4Q9C037 AC084783.1-201ENST00000565846 910 ntBASIC4.37□□□□□ -1.71
TRIM4Q9C037 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.37□□□□□ -1.71
TRIM4Q9C037 AC009101.1-201ENST00000568135 242 ntBASIC4.37□□□□□ -1.71
TRIM4Q9C037 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC4.37□□□□□ -1.71
TRIM4Q9C037 AC099676.1-201ENST00000608886 657 ntBASIC4.37□□□□□ -1.71
TRIM4Q9C037 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.37□□□□□ -1.71
TRIM4Q9C037 AL138721.1-201ENST00000616756 179 ntBASIC4.37□□□□□ -1.71
TRIM4Q9C037 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
TRIM4Q9C037 RAD17P1-201ENST00000418130 2042 ntBASIC4.37□□□□□ -1.71
TRIM4Q9C037 OR56B2P-202ENST00000641377 2453 ntBASIC4.37□□□□□ -1.71
TRIM4Q9C037 AL355852.1-201ENST00000454081 1771 ntBASIC4.37□□□□□ -1.71
TRIM4Q9C037 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
TRIM4Q9C037 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
TRIM4Q9C037 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
TRIM4Q9C037 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.36□□□□□ -1.71
TRIM4Q9C037 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
TRIM4Q9C037 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
TRIM4Q9C037 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
TRIM4Q9C037 OR4K17-201ENST00000315543 1032 ntBASIC4.36□□□□□ -1.71
TRIM4Q9C037 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
TRIM4Q9C037 RNA5SP397-201ENST00000391323 118 ntBASIC4.36□□□□□ -1.71
TRIM4Q9C037 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.36□□□□□ -1.71
TRIM4Q9C037 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.36□□□□□ -1.71
TRIM4Q9C037 RNA5SP306-201ENST00000411087 107 ntBASIC4.36□□□□□ -1.71
TRIM4Q9C037 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
TRIM4Q9C037 YY1P1-201ENST00000427625 668 ntBASIC4.36□□□□□ -1.71
TRIM4Q9C037 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
TRIM4Q9C037 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
TRIM4Q9C037 MTND2P25-201ENST00000449028 610 ntBASIC4.36□□□□□ -1.71
TRIM4Q9C037 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.36□□□□□ -1.71
TRIM4Q9C037 EIF4A2P2-201ENST00000455776 1070 ntBASIC4.36□□□□□ -1.71
TRIM4Q9C037 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC4.36□□□□□ -1.71
TRIM4Q9C037 RPL21P71-201ENST00000465598 459 ntBASIC4.36□□□□□ -1.71
TRIM4Q9C037 AC090142.1-201ENST00000465776 462 ntBASIC4.36□□□□□ -1.71
TRIM4Q9C037 RN7SL303P-201ENST00000469773 251 ntBASIC4.36□□□□□ -1.71
TRIM4Q9C037 RPL21P126-201ENST00000470049 478 ntBASIC4.36□□□□□ -1.71
TRIM4Q9C037 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.36□□□□□ -1.71
TRIM4Q9C037 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC4.36□□□□□ -1.71
TRIM4Q9C037 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
TRIM4Q9C037 AC091515.1-201ENST00000548110 679 ntBASIC4.36□□□□□ -1.71
TRIM4Q9C037 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC4.36□□□□□ -1.71
TRIM4Q9C037 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.36□□□□□ -1.71
TRIM4Q9C037 AC141257.3-201ENST00000572906 215 ntBASIC4.36□□□□□ -1.71
TRIM4Q9C037 MIR4444-1-201ENST00000581696 74 ntBASIC4.36□□□□□ -1.71
TRIM4Q9C037 MIR4444-2-201ENST00000584390 74 ntBASIC4.36□□□□□ -1.71
TRIM4Q9C037 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.36□□□□□ -1.71
TRIM4Q9C037 AC011815.3-201ENST00000624194 473 ntBASIC4.36□□□□□ -1.71
TRIM4Q9C037 RNA5SP196-201ENST00000625967 102 ntBASIC4.36□□□□□ -1.71
TRIM4Q9C037 HSPA8P1-201ENST00000425843 1833 ntBASIC4.36□□□□□ -1.71
TRIM4Q9C037 MTND4P10-201ENST00000446199 1363 ntBASIC4.36□□□□□ -1.71
TRIM4Q9C037 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
TRIM4Q9C037 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
TRIM4Q9C037 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
TRIM4Q9C037 AP001486.2-201ENST00000561652 5113 ntBASIC4.35□□□□□ -1.71
TRIM4Q9C037 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
TRIM4Q9C037 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.35□□□□□ -1.71
TRIM4Q9C037 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
TRIM4Q9C037 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
TRIM4Q9C037 SPRR2C-201ENST00000290702 219 ntBASIC4.35□□□□□ -1.71
TRIM4Q9C037 RN7SKP56-201ENST00000410513 331 ntBASIC4.35□□□□□ -1.71
TRIM4Q9C037 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.35□□□□□ -1.71
TRIM4Q9C037 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC4.35□□□□□ -1.71
TRIM4Q9C037 RPL21P91-201ENST00000429231 479 ntBASIC4.35□□□□□ -1.71
TRIM4Q9C037 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.35□□□□□ -1.71
TRIM4Q9C037 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.35□□□□□ -1.71
TRIM4Q9C037 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.35□□□□□ -1.71
TRIM4Q9C037 AL162591.2-201ENST00000449634 317 ntBASIC4.35□□□□□ -1.71
TRIM4Q9C037 HMGB3P22-202ENST00000451823 572 ntBASIC4.35□□□□□ -1.71
TRIM4Q9C037 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC4.35□□□□□ -1.71
TRIM4Q9C037 AC090013.1-201ENST00000485147 480 ntBASIC4.35□□□□□ -1.71
TRIM4Q9C037 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC4.35□□□□□ -1.71
TRIM4Q9C037 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.35□□□□□ -1.71
TRIM4Q9C037 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.35□□□□□ -1.71
TRIM4Q9C037 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
TRIM4Q9C037 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.35□□□□□ -1.71
TRIM4Q9C037 SULT1C2P2-201ENST00000562517 294 ntBASIC4.35□□□□□ -1.71
TRIM4Q9C037 AGGF1P8-201ENST00000562979 1000 ntBASIC4.35□□□□□ -1.71
TRIM4Q9C037 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.35□□□□□ -1.71
TRIM4Q9C037 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.35□□□□□ -1.71
TRIM4Q9C037 HMGB2P1-201ENST00000591146 634 ntBASIC4.35□□□□□ -1.71
TRIM4Q9C037 VN1R79P-201ENST00000593540 513 ntBASIC4.35□□□□□ -1.71
TRIM4Q9C037 AL591034.3-201ENST00000605511 685 ntBASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms