Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC6.46□□□□□ -1.37
TOPBP1Q92547 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC6.46□□□□□ -1.37
TOPBP1Q92547 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC6.46□□□□□ -1.37
TOPBP1Q92547 AC079684.1-201ENST00000621405 437 ntBASIC6.46□□□□□ -1.37
TOPBP1Q92547 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC6.46□□□□□ -1.37
TOPBP1Q92547 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC6.46□□□□□ -1.37
TOPBP1Q92547 MARK2P15-201ENST00000432204 2186 ntBASIC6.46□□□□□ -1.38
TOPBP1Q92547 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
TOPBP1Q92547 MTND6P6-201ENST00000478031 263 ntBASIC6.45□□□□□ -1.38
TOPBP1Q92547 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
TOPBP1Q92547 AC015922.4-201ENST00000612568 690 ntBASIC6.45□□□□□ -1.38
TOPBP1Q92547 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
TOPBP1Q92547 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
TOPBP1Q92547 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
TOPBP1Q92547 AP001642.1-201ENST00000624727 2117 ntBASIC6.45□□□□□ -1.38
TOPBP1Q92547 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC6.45□□□□□ -1.38
TOPBP1Q92547 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
TOPBP1Q92547 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC6.45□□□□□ -1.38
TOPBP1Q92547 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
TOPBP1Q92547 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
TOPBP1Q92547 RPS23P10-201ENST00000416185 486 ntBASIC6.45□□□□□ -1.38
TOPBP1Q92547 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC6.45□□□□□ -1.38
TOPBP1Q92547 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC6.45□□□□□ -1.38
TOPBP1Q92547 RANP8-201ENST00000444720 713 ntBASIC6.45□□□□□ -1.38
TOPBP1Q92547 AL031584.1-201ENST00000447169 754 ntBASIC6.45□□□□□ -1.38
TOPBP1Q92547 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC6.45□□□□□ -1.38
TOPBP1Q92547 AC026784.1-201ENST00000507986 352 ntBASIC6.45□□□□□ -1.38
TOPBP1Q92547 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC6.45□□□□□ -1.38
TOPBP1Q92547 SNORA70.17-201ENST00000516449 133 ntBASIC6.45□□□□□ -1.38
TOPBP1Q92547 AC022695.1-201ENST00000522089 237 ntBASIC6.45□□□□□ -1.38
TOPBP1Q92547 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC6.45□□□□□ -1.38
TOPBP1Q92547 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC6.45□□□□□ -1.38
TOPBP1Q92547 AC104662.1-201ENST00000604448 511 ntBASIC6.45□□□□□ -1.38
TOPBP1Q92547 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC6.45□□□□□ -1.38
TOPBP1Q92547 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC6.45□□□□□ -1.38
TOPBP1Q92547 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
TOPBP1Q92547 AC000374.1-201ENST00000434698 1745 ntBASIC6.45□□□□□ -1.38
TOPBP1Q92547 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
TOPBP1Q92547 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
TOPBP1Q92547 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
TOPBP1Q92547 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
TOPBP1Q92547 SNORD9-201ENST00000362566 104 ntBASIC6.44□□□□□ -1.38
TOPBP1Q92547 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
TOPBP1Q92547 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
TOPBP1Q92547 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC6.44□□□□□ -1.38
TOPBP1Q92547 AC236972.1-201ENST00000433225 199 ntBASIC6.44□□□□□ -1.38
TOPBP1Q92547 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC6.44□□□□□ -1.38
TOPBP1Q92547 AL591363.1-201ENST00000450091 483 ntBASIC6.44□□□□□ -1.38
TOPBP1Q92547 AC128716.1-201ENST00000475129 166 ntBASIC6.44□□□□□ -1.38
TOPBP1Q92547 RPL7P24-201ENST00000493052 752 ntBASIC6.44□□□□□ -1.38
TOPBP1Q92547 RN7SKP289-201ENST00000517244 295 ntBASIC6.44□□□□□ -1.38
TOPBP1Q92547 AC138832.1-201ENST00000522871 556 ntBASIC6.44□□□□□ -1.38
TOPBP1Q92547 STX3-204ENST00000530221 534 ntTSL 5 BASIC6.44□□□□□ -1.38
TOPBP1Q92547 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC6.44□□□□□ -1.38
TOPBP1Q92547 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC6.44□□□□□ -1.38
TOPBP1Q92547 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC6.44□□□□□ -1.38
TOPBP1Q92547 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
TOPBP1Q92547 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
TOPBP1Q92547 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC6.44□□□□□ -1.38
TOPBP1Q92547 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC6.44□□□□□ -1.38
TOPBP1Q92547 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC6.43□□□□□ -1.38
TOPBP1Q92547 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
TOPBP1Q92547 AC007823.1-201ENST00000569932 1566 ntBASIC6.43□□□□□ -1.38
TOPBP1Q92547 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC6.43□□□□□ -1.38
TOPBP1Q92547 MIR1289-1-201ENST00000408836 144 ntBASIC6.43□□□□□ -1.38
TOPBP1Q92547 AL121878.1-201ENST00000418638 859 ntBASIC6.43□□□□□ -1.38
TOPBP1Q92547 ATP5JP1-201ENST00000431631 322 ntBASIC6.43□□□□□ -1.38
TOPBP1Q92547 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC6.43□□□□□ -1.38
TOPBP1Q92547 AC006994.1-201ENST00000438212 839 ntBASIC6.43□□□□□ -1.38
TOPBP1Q92547 AC090589.1-201ENST00000473109 362 ntBASIC6.43□□□□□ -1.38
TOPBP1Q92547 AC090136.1-201ENST00000520009 240 ntBASIC6.43□□□□□ -1.38
TOPBP1Q92547 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC6.43□□□□□ -1.38
TOPBP1Q92547 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC6.43□□□□□ -1.38
TOPBP1Q92547 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
TOPBP1Q92547 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC6.43□□□□□ -1.38
TOPBP1Q92547 AL672167.1-205ENST00000641112 3080 ntBASIC6.43□□□□□ -1.38
TOPBP1Q92547 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
TOPBP1Q92547 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC6.42□□□□□ -1.38
TOPBP1Q92547 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
TOPBP1Q92547 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC6.42□□□□□ -1.38
TOPBP1Q92547 RNA5SP120-201ENST00000410900 112 ntBASIC6.42□□□□□ -1.38
TOPBP1Q92547 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC6.42□□□□□ -1.38
TOPBP1Q92547 RBMY2UP-201ENST00000453474 324 ntBASIC6.42□□□□□ -1.38
TOPBP1Q92547 AL136126.1-201ENST00000473603 402 ntBASIC6.42□□□□□ -1.38
TOPBP1Q92547 RPL5P12-201ENST00000477071 851 ntBASIC6.42□□□□□ -1.38
TOPBP1Q92547 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC6.42□□□□□ -1.38
TOPBP1Q92547 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC6.42□□□□□ -1.38
TOPBP1Q92547 RNA5SP164-201ENST00000516533 110 ntBASIC6.42□□□□□ -1.38
TOPBP1Q92547 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC6.42□□□□□ -1.38
TOPBP1Q92547 MEG8-215ENST00000555354 469 ntTSL 3 BASIC6.42□□□□□ -1.38
TOPBP1Q92547 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC6.42□□□□□ -1.38
TOPBP1Q92547 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC6.42□□□□□ -1.38
TOPBP1Q92547 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC6.42□□□□□ -1.38
TOPBP1Q92547 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC6.42□□□□□ -1.38
TOPBP1Q92547 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
TOPBP1Q92547 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC6.42□□□□□ -1.38
TOPBP1Q92547 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
TOPBP1Q92547 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC6.41□□□□□ -1.38
TOPBP1Q92547 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
TOPBP1Q92547 AL358178.1-201ENST00000407698 397 ntBASIC6.41□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms