Protein–RNA interactions for Protein: Q15475

SIX1, Homeobox protein SIX1, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1Q15475 IGLVIV-66-1-201ENST00000521832 460 ntBASIC4.33□□□□□ -1.72
SIX1Q15475 AC092451.2-201ENST00000538746 658 ntBASIC4.33□□□□□ -1.72
SIX1Q15475 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.33□□□□□ -1.72
SIX1Q15475 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SIX1Q15475 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC4.33□□□□□ -1.72
SIX1Q15475 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.33□□□□□ -1.72
SIX1Q15475 AC004775.1-201ENST00000607389 753 ntBASIC4.33□□□□□ -1.72
SIX1Q15475 MIR7641-1-201ENST00000627518 61 ntBASIC4.33□□□□□ -1.72
SIX1Q15475 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.33□□□□□ -1.72
SIX1Q15475 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SIX1Q15475 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SIX1Q15475 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SIX1Q15475 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.32□□□□□ -1.72
SIX1Q15475 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SIX1Q15475 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.32□□□□□ -1.72
SIX1Q15475 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SIX1Q15475 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SIX1Q15475 GSTA12P-201ENST00000402398 508 ntBASIC4.32□□□□□ -1.72
SIX1Q15475 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SIX1Q15475 AC069213.2-201ENST00000420238 366 ntBASIC4.32□□□□□ -1.72
SIX1Q15475 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SIX1Q15475 MORF4L1P7-201ENST00000426038 703 ntBASIC4.32□□□□□ -1.72
SIX1Q15475 YWHAEP5-201ENST00000431545 765 ntBASIC4.32□□□□□ -1.72
SIX1Q15475 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SIX1Q15475 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC4.32□□□□□ -1.72
SIX1Q15475 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC4.32□□□□□ -1.72
SIX1Q15475 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SIX1Q15475 AC109327.1-201ENST00000471666 403 ntBASIC4.32□□□□□ -1.72
SIX1Q15475 AC108729.2-201ENST00000476543 840 ntBASIC4.32□□□□□ -1.72
SIX1Q15475 AC015908.1-201ENST00000478739 476 ntBASIC4.32□□□□□ -1.72
SIX1Q15475 RPS29P19-201ENST00000479709 171 ntBASIC4.32□□□□□ -1.72
SIX1Q15475 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SIX1Q15475 RPL23AP73-201ENST00000492507 471 ntBASIC4.32□□□□□ -1.72
SIX1Q15475 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SIX1Q15475 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC4.32□□□□□ -1.72
SIX1Q15475 AL592156.1-201ENST00000508758 304 ntBASIC4.32□□□□□ -1.72
SIX1Q15475 RNA5SP519-201ENST00000516480 119 ntBASIC4.32□□□□□ -1.72
SIX1Q15475 IGLVIV-65-201ENST00000517313 360 ntBASIC4.32□□□□□ -1.72
SIX1Q15475 AC103833.1-201ENST00000517442 172 ntBASIC4.32□□□□□ -1.72
SIX1Q15475 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.32□□□□□ -1.72
SIX1Q15475 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC4.32□□□□□ -1.72
SIX1Q15475 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC4.32□□□□□ -1.72
SIX1Q15475 AC010476.1-201ENST00000519111 851 ntBASIC4.32□□□□□ -1.72
SIX1Q15475 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.32□□□□□ -1.72
SIX1Q15475 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC4.32□□□□□ -1.72
SIX1Q15475 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.32□□□□□ -1.72
SIX1Q15475 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC4.32□□□□□ -1.72
SIX1Q15475 AC079171.1-201ENST00000568788 914 ntBASIC4.32□□□□□ -1.72
SIX1Q15475 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.32□□□□□ -1.72
SIX1Q15475 AC135178.6-201ENST00000605314 398 ntBASIC4.32□□□□□ -1.72
SIX1Q15475 MKKS-203ENST00000609375 882 ntTSL 2 BASIC4.32□□□□□ -1.72
SIX1Q15475 AL158196.1-201ENST00000616786 434 ntBASIC4.32□□□□□ -1.72
SIX1Q15475 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC4.32□□□□□ -1.72
SIX1Q15475 AL035461.2-201ENST00000619201 524 ntBASIC4.32□□□□□ -1.72
SIX1Q15475 OR5AC4P-202ENST00000642086 985 ntBASIC4.32□□□□□ -1.72
SIX1Q15475 HSPD1P11-201ENST00000508643 1702 ntBASIC4.32□□□□□ -1.72
SIX1Q15475 AL158163.1-201ENST00000603915 1649 ntBASIC4.32□□□□□ -1.72
SIX1Q15475 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.32□□□□□ -1.72
SIX1Q15475 AC092162.3-201ENST00000624511 1624 ntBASIC4.32□□□□□ -1.72
SIX1Q15475 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
SIX1Q15475 AC087190.4-201ENST00000574616 8334 ntBASIC4.31□□□□□ -1.72
SIX1Q15475 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
SIX1Q15475 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.31□□□□□ -1.72
SIX1Q15475 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
SIX1Q15475 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
SIX1Q15475 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.31□□□□□ -1.72
SIX1Q15475 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
SIX1Q15475 RNA5SP505-201ENST00000364748 108 ntBASIC4.31□□□□□ -1.72
SIX1Q15475 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.31□□□□□ -1.72
SIX1Q15475 PTGES3P2-201ENST00000407942 482 ntBASIC4.31□□□□□ -1.72
SIX1Q15475 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC4.31□□□□□ -1.72
SIX1Q15475 AC092570.3-201ENST00000420113 693 ntBASIC4.31□□□□□ -1.72
SIX1Q15475 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SIX1Q15475 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.31□□□□□ -1.72
SIX1Q15475 AC068287.1-201ENST00000430283 295 ntBASIC4.31□□□□□ -1.72
SIX1Q15475 PHBP16-201ENST00000446318 950 ntBASIC4.31□□□□□ -1.72
SIX1Q15475 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC4.31□□□□□ -1.72
SIX1Q15475 AC021087.2-201ENST00000504656 1203 ntBASIC4.31□□□□□ -1.72
SIX1Q15475 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC4.31□□□□□ -1.72
SIX1Q15475 AC010468.3-201ENST00000508225 458 ntBASIC4.31□□□□□ -1.72
SIX1Q15475 RFPL4AP5-201ENST00000514977 504 ntBASIC4.31□□□□□ -1.72
SIX1Q15475 RNA5SP49-201ENST00000516450 115 ntBASIC4.31□□□□□ -1.72
SIX1Q15475 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC4.31□□□□□ -1.72
SIX1Q15475 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.31□□□□□ -1.72
SIX1Q15475 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC4.31□□□□□ -1.72
SIX1Q15475 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SIX1Q15475 AC019227.1-201ENST00000526902 510 ntBASIC4.31□□□□□ -1.72
SIX1Q15475 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC4.31□□□□□ -1.72
SIX1Q15475 AC008126.1-201ENST00000549019 480 ntBASIC4.31□□□□□ -1.72
SIX1Q15475 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.31□□□□□ -1.72
SIX1Q15475 SULT1C2P2-201ENST00000562517 294 ntBASIC4.31□□□□□ -1.72
SIX1Q15475 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC4.31□□□□□ -1.72
SIX1Q15475 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.31□□□□□ -1.72
SIX1Q15475 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
SIX1Q15475 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.31□□□□□ -1.72
SIX1Q15475 MTCO3P22-201ENST00000603219 784 ntBASIC4.31□□□□□ -1.72
SIX1Q15475 AC090948.1-201ENST00000607464 549 ntBASIC4.31□□□□□ -1.72
SIX1Q15475 AC019193.2-201ENST00000610012 634 ntBASIC4.31□□□□□ -1.72
SIX1Q15475 FAM27D1-201ENST00000612308 341 ntBASIC4.31□□□□□ -1.72
SIX1Q15475 AL773545.4-201ENST00000637262 310 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms