Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 RN7SL98P-201ENST00000462271 300 ntBASIC3.43□□□□□ -1.86
LSM3P62310 RN7SL354P-201ENST00000469282 294 ntBASIC3.43□□□□□ -1.86
LSM3P62310 RPL35P6-201ENST00000490024 372 ntBASIC3.43□□□□□ -1.86
LSM3P62310 RPL7P51-201ENST00000490532 749 ntBASIC3.43□□□□□ -1.86
LSM3P62310 AC090568.1-201ENST00000509499 856 ntBASIC3.43□□□□□ -1.86
LSM3P62310 PCBP2P3-201ENST00000509726 843 ntBASIC3.43□□□□□ -1.86
LSM3P62310 ARL2BPP6-201ENST00000512757 439 ntBASIC3.43□□□□□ -1.86
LSM3P62310 RNA5SP208-201ENST00000516156 78 ntBASIC3.43□□□□□ -1.86
LSM3P62310 IGHV3-32-201ENST00000519182 355 ntBASIC3.43□□□□□ -1.86
LSM3P62310 AC008489.1-201ENST00000524271 483 ntBASIC3.43□□□□□ -1.86
LSM3P62310 AC122134.1-201ENST00000565664 1104 ntBASIC3.43□□□□□ -1.86
LSM3P62310 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC3.43□□□□□ -1.86
LSM3P62310 MIR4489-201ENST00000578869 62 ntBASIC3.43□□□□□ -1.86
LSM3P62310 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC3.43□□□□□ -1.86
LSM3P62310 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC3.43□□□□□ -1.86
LSM3P62310 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
LSM3P62310 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
LSM3P62310 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.43□□□□□ -1.86
LSM3P62310 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
LSM3P62310 C4BPAP1-201ENST00000415474 1893 ntBASIC3.43□□□□□ -1.86
LSM3P62310 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
LSM3P62310 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
LSM3P62310 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
LSM3P62310 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
LSM3P62310 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
LSM3P62310 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
LSM3P62310 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
LSM3P62310 MIR365B-201ENST00000362317 111 ntBASIC3.42□□□□□ -1.86
LSM3P62310 RNU6-1263P-201ENST00000384601 106 ntBASIC3.42□□□□□ -1.86
LSM3P62310 EIF4A1P3-201ENST00000411521 244 ntBASIC3.42□□□□□ -1.86
LSM3P62310 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
LSM3P62310 AL356387.2-201ENST00000422272 243 ntBASIC3.42□□□□□ -1.86
LSM3P62310 OR5BE1P-201ENST00000425977 939 ntBASIC3.42□□□□□ -1.86
LSM3P62310 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC3.42□□□□□ -1.86
LSM3P62310 KRTAP8-2P-201ENST00000440620 186 ntBASIC3.42□□□□□ -1.86
LSM3P62310 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC3.42□□□□□ -1.86
LSM3P62310 RN7SL329P-201ENST00000467740 299 ntBASIC3.42□□□□□ -1.86
LSM3P62310 USP9YP5-201ENST00000511770 630 ntBASIC3.42□□□□□ -1.86
LSM3P62310 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC3.42□□□□□ -1.86
LSM3P62310 OR5D15P-201ENST00000531671 942 ntBASIC3.42□□□□□ -1.86
LSM3P62310 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC3.42□□□□□ -1.86
LSM3P62310 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC3.42□□□□□ -1.86
LSM3P62310 AC022146.1-201ENST00000595307 847 ntBASIC3.42□□□□□ -1.86
LSM3P62310 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC3.42□□□□□ -1.86
LSM3P62310 OR5BE1P-202ENST00000641168 1176 ntBASIC3.42□□□□□ -1.86
LSM3P62310 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
LSM3P62310 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
LSM3P62310 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
LSM3P62310 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
LSM3P62310 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
LSM3P62310 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
LSM3P62310 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
LSM3P62310 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
LSM3P62310 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC3.41□□□□□ -1.86
LSM3P62310 SNORA60-201ENST00000362396 134 ntBASIC3.41□□□□□ -1.86
LSM3P62310 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
LSM3P62310 AC006065.1-201ENST00000422539 802 ntBASIC3.41□□□□□ -1.86
LSM3P62310 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC3.41□□□□□ -1.86
LSM3P62310 AC245517.2-201ENST00000442890 346 ntBASIC3.41□□□□□ -1.86
LSM3P62310 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.41□□□□□ -1.86
LSM3P62310 HSPE1P22-201ENST00000456856 327 ntBASIC3.41□□□□□ -1.86
LSM3P62310 RNA5SP246-201ENST00000458909 119 ntBASIC3.41□□□□□ -1.86
LSM3P62310 AC084198.1-201ENST00000477747 402 ntBASIC3.41□□□□□ -1.86
LSM3P62310 NPM1P17-201ENST00000479221 602 ntBASIC3.41□□□□□ -1.86
LSM3P62310 RN7SL727P-201ENST00000482164 296 ntBASIC3.41□□□□□ -1.86
LSM3P62310 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC3.41□□□□□ -1.86
LSM3P62310 AC008958.1-201ENST00000511047 682 ntBASIC3.41□□□□□ -1.86
LSM3P62310 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.41□□□□□ -1.86
LSM3P62310 RN7SKP34-201ENST00000516142 244 ntBASIC3.41□□□□□ -1.86
LSM3P62310 RN7SKP60-201ENST00000516985 239 ntBASIC3.41□□□□□ -1.86
LSM3P62310 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
LSM3P62310 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
LSM3P62310 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.41□□□□□ -1.86
LSM3P62310 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.41□□□□□ -1.86
LSM3P62310 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.41□□□□□ -1.86
LSM3P62310 AC090312.1-201ENST00000580637 348 ntBASIC3.41□□□□□ -1.86
LSM3P62310 KLKP1-201ENST00000595979 403 ntBASIC3.41□□□□□ -1.86
LSM3P62310 AC068790.7-201ENST00000602347 528 ntBASIC3.41□□□□□ -1.86
LSM3P62310 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.41□□□□□ -1.86
LSM3P62310 AL133247.2-201ENST00000603236 482 ntBASIC3.41□□□□□ -1.86
LSM3P62310 AC023813.4-201ENST00000607580 580 ntBASIC3.41□□□□□ -1.86
LSM3P62310 uc_338.32-201ENST00000615087 172 ntBASIC3.41□□□□□ -1.86
LSM3P62310 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
LSM3P62310 AP002967.1-201ENST00000624203 539 ntBASIC3.41□□□□□ -1.86
LSM3P62310 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.41□□□□□ -1.86
LSM3P62310 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.41□□□□□ -1.86
LSM3P62310 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
LSM3P62310 PWAR6-201ENST00000552334 4618 ntBASIC3.4□□□□□ -1.86
LSM3P62310 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
LSM3P62310 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
LSM3P62310 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
LSM3P62310 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
LSM3P62310 RNA5SP507-201ENST00000363603 121 ntBASIC3.4□□□□□ -1.87
LSM3P62310 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.4□□□□□ -1.87
LSM3P62310 MIR1282-201ENST00000408865 101 ntBASIC3.4□□□□□ -1.87
LSM3P62310 AC099535.1-201ENST00000408928 371 ntBASIC3.4□□□□□ -1.87
LSM3P62310 HSPE1P12-201ENST00000412576 301 ntBASIC3.4□□□□□ -1.87
LSM3P62310 AC009237.5-201ENST00000414271 501 ntBASIC3.4□□□□□ -1.87
LSM3P62310 RPS15AP6-201ENST00000420703 385 ntBASIC3.4□□□□□ -1.87
LSM3P62310 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms