Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC4.9□□□□□ -1.63
HOXC13P31276 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.9□□□□□ -1.63
HOXC13P31276 AC005520.3-201ENST00000602874 370 ntBASIC4.9□□□□□ -1.63
HOXC13P31276 AC233280.2-201ENST00000603917 1070 ntBASIC4.9□□□□□ -1.63
HOXC13P31276 AC010680.4-201ENST00000605334 543 ntBASIC4.9□□□□□ -1.63
HOXC13P31276 AC008147.4-201ENST00000617570 1204 ntBASIC4.9□□□□□ -1.63
HOXC13P31276 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.9□□□□□ -1.63
HOXC13P31276 AC067931.1-201ENST00000624190 671 ntBASIC4.9□□□□□ -1.63
HOXC13P31276 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC4.9□□□□□ -1.63
HOXC13P31276 CDRT1-208ENST00000630868 794 ntBASIC4.9□□□□□ -1.63
HOXC13P31276 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.9□□□□□ -1.63
HOXC13P31276 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.9□□□□□ -1.63
HOXC13P31276 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
HOXC13P31276 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
HOXC13P31276 EIF2AP4-201ENST00000424793 1781 ntBASIC4.9□□□□□ -1.63
HOXC13P31276 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
HOXC13P31276 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
HOXC13P31276 AC024341.1-201ENST00000526444 1552 ntBASIC4.9□□□□□ -1.63
HOXC13P31276 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.63
HOXC13P31276 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.9□□□□□ -1.63
HOXC13P31276 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.9□□□□□ -1.63
HOXC13P31276 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HOXC13P31276 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
HOXC13P31276 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HOXC13P31276 AL133243.3-201ENST00000617415 3004 ntBASIC4.89□□□□□ -1.63
HOXC13P31276 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HOXC13P31276 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
HOXC13P31276 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
HOXC13P31276 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
HOXC13P31276 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC4.89□□□□□ -1.63
HOXC13P31276 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HOXC13P31276 RN7SKP44-201ENST00000363602 316 ntBASIC4.89□□□□□ -1.63
HOXC13P31276 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC4.89□□□□□ -1.63
HOXC13P31276 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.89□□□□□ -1.63
HOXC13P31276 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.89□□□□□ -1.63
HOXC13P31276 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.89□□□□□ -1.63
HOXC13P31276 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.89□□□□□ -1.63
HOXC13P31276 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.89□□□□□ -1.63
HOXC13P31276 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HOXC13P31276 MTCO3P4-201ENST00000419236 787 ntBASIC4.89□□□□□ -1.63
HOXC13P31276 BX119904.1-201ENST00000432026 348 ntBASIC4.89□□□□□ -1.63
HOXC13P31276 NMNAT1P2-201ENST00000435192 860 ntBASIC4.89□□□□□ -1.63
HOXC13P31276 AC016831.4-201ENST00000438302 307 ntBASIC4.89□□□□□ -1.63
HOXC13P31276 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.89□□□□□ -1.63
HOXC13P31276 NDUFAF4P2-201ENST00000445374 520 ntBASIC4.89□□□□□ -1.63
HOXC13P31276 CDC27P1-201ENST00000445384 715 ntBASIC4.89□□□□□ -1.63
HOXC13P31276 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.89□□□□□ -1.63
HOXC13P31276 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC4.89□□□□□ -1.63
HOXC13P31276 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.89□□□□□ -1.63
HOXC13P31276 AC104629.1-201ENST00000494226 508 ntBASIC4.89□□□□□ -1.63
HOXC13P31276 AC025768.1-201ENST00000510057 267 ntBASIC4.89□□□□□ -1.63
HOXC13P31276 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC4.89□□□□□ -1.63
HOXC13P31276 RNA5SP464-201ENST00000516251 108 ntBASIC4.89□□□□□ -1.63
HOXC13P31276 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.89□□□□□ -1.63
HOXC13P31276 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC4.89□□□□□ -1.63
HOXC13P31276 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC4.89□□□□□ -1.63
HOXC13P31276 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.89□□□□□ -1.63
HOXC13P31276 AL671309.1-201ENST00000603750 544 ntBASIC4.89□□□□□ -1.63
HOXC13P31276 AL356218.2-201ENST00000605264 187 ntBASIC4.89□□□□□ -1.63
HOXC13P31276 AL392048.1-201ENST00000613946 534 ntBASIC4.89□□□□□ -1.63
HOXC13P31276 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC4.89□□□□□ -1.63
HOXC13P31276 AC073592.7-201ENST00000623659 507 ntBASIC4.89□□□□□ -1.63
HOXC13P31276 AP000720.1-201ENST00000625091 483 ntBASIC4.89□□□□□ -1.63
HOXC13P31276 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
HOXC13P31276 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
HOXC13P31276 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.89□□□□□ -1.63
HOXC13P31276 THAP12P5-201ENST00000405864 2275 ntBASIC4.89□□□□□ -1.63
HOXC13P31276 AL359922.3-201ENST00000624779 1670 ntBASIC4.89□□□□□ -1.63
HOXC13P31276 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
HOXC13P31276 AC112198.2-201ENST00000426589 6996 ntBASIC4.88□□□□□ -1.63
HOXC13P31276 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
HOXC13P31276 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
HOXC13P31276 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
HOXC13P31276 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HOXC13P31276 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HOXC13P31276 METTL21EP-201ENST00000298105 713 ntBASIC4.88□□□□□ -1.63
HOXC13P31276 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
HOXC13P31276 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.88□□□□□ -1.63
HOXC13P31276 AL357078.2-201ENST00000416486 427 ntBASIC4.88□□□□□ -1.63
HOXC13P31276 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC4.88□□□□□ -1.63
HOXC13P31276 ATG4AP1-201ENST00000416893 538 ntBASIC4.88□□□□□ -1.63
HOXC13P31276 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC4.88□□□□□ -1.63
HOXC13P31276 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.88□□□□□ -1.63
HOXC13P31276 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.88□□□□□ -1.63
HOXC13P31276 MORF4L1P7-201ENST00000426038 703 ntBASIC4.88□□□□□ -1.63
HOXC13P31276 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.88□□□□□ -1.63
HOXC13P31276 FTH1P16-201ENST00000435241 552 ntBASIC4.88□□□□□ -1.63
HOXC13P31276 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC4.88□□□□□ -1.63
HOXC13P31276 AC004938.1-201ENST00000438468 308 ntBASIC4.88□□□□□ -1.63
HOXC13P31276 AC104651.2-201ENST00000447549 528 ntBASIC4.88□□□□□ -1.63
HOXC13P31276 AC079168.2-201ENST00000453977 416 ntBASIC4.88□□□□□ -1.63
HOXC13P31276 AC011276.1-201ENST00000469688 323 ntBASIC4.88□□□□□ -1.63
HOXC13P31276 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.88□□□□□ -1.63
HOXC13P31276 NPM1P17-201ENST00000479221 602 ntBASIC4.88□□□□□ -1.63
HOXC13P31276 AC025164.1-201ENST00000496249 478 ntBASIC4.88□□□□□ -1.63
HOXC13P31276 AC010468.3-201ENST00000508225 458 ntBASIC4.88□□□□□ -1.63
HOXC13P31276 AC093824.1-201ENST00000508796 343 ntBASIC4.88□□□□□ -1.63
HOXC13P31276 SNORA31.13-201ENST00000516624 135 ntBASIC4.88□□□□□ -1.63
HOXC13P31276 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.88□□□□□ -1.63
HOXC13P31276 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms