Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
XRCC1P18887 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.31□□□□□ -1.72
XRCC1P18887 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
XRCC1P18887 AP000756.2-201ENST00000624168 2567 ntBASIC4.31□□□□□ -1.72
XRCC1P18887 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
XRCC1P18887 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
XRCC1P18887 AC008033.1-201ENST00000216407 1162 ntBASIC4.31□□□□□ -1.72
XRCC1P18887 FAM3C2-201ENST00000312214 681 ntBASIC4.31□□□□□ -1.72
XRCC1P18887 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.31□□□□□ -1.72
XRCC1P18887 RNU6-984P-201ENST00000363236 109 ntBASIC4.31□□□□□ -1.72
XRCC1P18887 SNORA70.2-201ENST00000364506 135 ntBASIC4.31□□□□□ -1.72
XRCC1P18887 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
XRCC1P18887 RNU6-31P-201ENST00000384388 108 ntBASIC4.31□□□□□ -1.72
XRCC1P18887 MIR708-201ENST00000390708 88 ntBASIC4.31□□□□□ -1.72
XRCC1P18887 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.31□□□□□ -1.72
XRCC1P18887 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.31□□□□□ -1.72
XRCC1P18887 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC4.31□□□□□ -1.72
XRCC1P18887 AC011933.1-201ENST00000413334 321 ntBASIC4.31□□□□□ -1.72
XRCC1P18887 SNRPFP1-201ENST00000414761 252 ntBASIC4.31□□□□□ -1.72
XRCC1P18887 AC009302.1-201ENST00000417147 390 ntBASIC4.31□□□□□ -1.72
XRCC1P18887 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.31□□□□□ -1.72
XRCC1P18887 MTND4LP14-201ENST00000429447 288 ntBASIC4.31□□□□□ -1.72
XRCC1P18887 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.31□□□□□ -1.72
XRCC1P18887 AC114495.1-201ENST00000441274 436 ntBASIC4.31□□□□□ -1.72
XRCC1P18887 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.31□□□□□ -1.72
XRCC1P18887 AL513343.1-201ENST00000451818 792 ntBASIC4.31□□□□□ -1.72
XRCC1P18887 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.31□□□□□ -1.72
XRCC1P18887 FGF7P3-201ENST00000454645 303 ntBASIC4.31□□□□□ -1.72
XRCC1P18887 RPL7P32-201ENST00000457119 744 ntBASIC4.31□□□□□ -1.72
XRCC1P18887 AC116533.1-201ENST00000459748 321 ntBASIC4.31□□□□□ -1.72
XRCC1P18887 RPS27AP17-201ENST00000463344 455 ntBASIC4.31□□□□□ -1.72
XRCC1P18887 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.31□□□□□ -1.72
XRCC1P18887 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC4.31□□□□□ -1.72
XRCC1P18887 RN7SKP122-201ENST00000515923 296 ntBASIC4.31□□□□□ -1.72
XRCC1P18887 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.31□□□□□ -1.72
XRCC1P18887 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.31□□□□□ -1.72
XRCC1P18887 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.31□□□□□ -1.72
XRCC1P18887 PARP1P2-201ENST00000556806 195 ntBASIC4.31□□□□□ -1.72
XRCC1P18887 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.31□□□□□ -1.72
XRCC1P18887 HMGB3P26-201ENST00000560051 582 ntBASIC4.31□□□□□ -1.72
XRCC1P18887 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC4.31□□□□□ -1.72
XRCC1P18887 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.31□□□□□ -1.72
XRCC1P18887 AC113403.1-201ENST00000604910 193 ntBASIC4.31□□□□□ -1.72
XRCC1P18887 AC114781.5-201ENST00000615297 108 ntBASIC4.31□□□□□ -1.72
XRCC1P18887 AC119674.1-212ENST00000641155 993 ntBASIC4.31□□□□□ -1.72
XRCC1P18887 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.31□□□□□ -1.72
XRCC1P18887 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
XRCC1P18887 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
XRCC1P18887 AC026951.1-201ENST00000559530 2459 ntBASIC4.31□□□□□ -1.72
XRCC1P18887 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.31□□□□□ -1.72
XRCC1P18887 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
XRCC1P18887 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
XRCC1P18887 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
XRCC1P18887 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.3□□□□□ -1.72
XRCC1P18887 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.3□□□□□ -1.72
XRCC1P18887 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
XRCC1P18887 EIF2AP4-201ENST00000424793 1781 ntBASIC4.3□□□□□ -1.72
XRCC1P18887 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.3□□□□□ -1.72
XRCC1P18887 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.3□□□□□ -1.72
XRCC1P18887 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.3□□□□□ -1.72
XRCC1P18887 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
XRCC1P18887 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
XRCC1P18887 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.3□□□□□ -1.72
XRCC1P18887 AL589826.1-201ENST00000340697 249 ntBASIC4.3□□□□□ -1.72
XRCC1P18887 AL139095.3-201ENST00000419672 1203 ntBASIC4.3□□□□□ -1.72
XRCC1P18887 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC4.3□□□□□ -1.72
XRCC1P18887 PRELID3BP10-201ENST00000431957 584 ntBASIC4.3□□□□□ -1.72
XRCC1P18887 AL132765.1-201ENST00000434165 553 ntBASIC4.3□□□□□ -1.72
XRCC1P18887 RSL24D1P8-201ENST00000434442 492 ntBASIC4.3□□□□□ -1.72
XRCC1P18887 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC4.3□□□□□ -1.72
XRCC1P18887 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.3□□□□□ -1.72
XRCC1P18887 ELOCP3-201ENST00000439303 348 ntBASIC4.3□□□□□ -1.72
XRCC1P18887 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC4.3□□□□□ -1.72
XRCC1P18887 VN1R32P-201ENST00000452234 905 ntBASIC4.3□□□□□ -1.72
XRCC1P18887 TPRKBP1-201ENST00000456243 481 ntBASIC4.3□□□□□ -1.72
XRCC1P18887 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
XRCC1P18887 AC010618.1-201ENST00000469924 477 ntBASIC4.3□□□□□ -1.72
XRCC1P18887 OR52A4P-202ENST00000481634 799 ntBASIC4.3□□□□□ -1.72
XRCC1P18887 RN7SL812P-201ENST00000493791 279 ntBASIC4.3□□□□□ -1.72
XRCC1P18887 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.3□□□□□ -1.72
XRCC1P18887 SUMO1P1-201ENST00000497904 306 ntBASIC4.3□□□□□ -1.72
XRCC1P18887 AC025445.1-201ENST00000502728 300 ntBASIC4.3□□□□□ -1.72
XRCC1P18887 AC083829.1-201ENST00000503756 657 ntBASIC4.3□□□□□ -1.72
XRCC1P18887 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC4.3□□□□□ -1.72
XRCC1P18887 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
XRCC1P18887 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC4.3□□□□□ -1.72
XRCC1P18887 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC4.3□□□□□ -1.72
XRCC1P18887 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.3□□□□□ -1.72
XRCC1P18887 PSMB7P1-201ENST00000556349 514 ntBASIC4.3□□□□□ -1.72
XRCC1P18887 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC4.3□□□□□ -1.72
XRCC1P18887 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.3□□□□□ -1.72
XRCC1P18887 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.3□□□□□ -1.72
XRCC1P18887 MIR3138-201ENST00000585238 82 ntBASIC4.3□□□□□ -1.72
XRCC1P18887 AL160290.3-201ENST00000604869 165 ntBASIC4.3□□□□□ -1.72
XRCC1P18887 AL590392.1-201ENST00000604960 446 ntBASIC4.3□□□□□ -1.72
XRCC1P18887 MIR6716-201ENST00000613413 80 ntBASIC4.3□□□□□ -1.72
XRCC1P18887 AL118556.2-201ENST00000614375 824 ntBASIC4.3□□□□□ -1.72
XRCC1P18887 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
XRCC1P18887 AC009951.1-201ENST00000623674 2614 ntBASIC4.3□□□□□ -1.72
XRCC1P18887 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms