Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 SNORD105B-201ENST00000458770 79 ntBASIC6.6□□□□□ -1.35
CFTRP13569 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC6.6□□□□□ -1.35
CFTRP13569 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC6.6□□□□□ -1.35
CFTRP13569 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC6.6□□□□□ -1.35
CFTRP13569 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC6.6□□□□□ -1.35
CFTRP13569 AC084759.1-201ENST00000561168 290 ntBASIC6.6□□□□□ -1.35
CFTRP13569 MRPS21P9-201ENST00000571150 257 ntBASIC6.6□□□□□ -1.35
CFTRP13569 AC104662.1-201ENST00000604448 511 ntBASIC6.6□□□□□ -1.35
CFTRP13569 YPEL5P2-201ENST00000605553 359 ntBASIC6.6□□□□□ -1.35
CFTRP13569 AC015922.4-201ENST00000612568 690 ntBASIC6.6□□□□□ -1.35
CFTRP13569 AC079684.1-201ENST00000621405 437 ntBASIC6.6□□□□□ -1.35
CFTRP13569 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC6.6□□□□□ -1.35
CFTRP13569 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CFTRP13569 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
CFTRP13569 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC6.6□□□□□ -1.35
CFTRP13569 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CFTRP13569 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
CFTRP13569 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
CFTRP13569 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CFTRP13569 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
CFTRP13569 NPM1P36-201ENST00000415681 835 ntBASIC6.6□□□□□ -1.35
CFTRP13569 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC6.6□□□□□ -1.35
CFTRP13569 AC005300.1-201ENST00000428401 373 ntBASIC6.6□□□□□ -1.35
CFTRP13569 RPS17P13-201ENST00000448974 407 ntBASIC6.6□□□□□ -1.35
CFTRP13569 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
CFTRP13569 AP000563.1-201ENST00000490865 758 ntBASIC6.6□□□□□ -1.35
CFTRP13569 AC026784.1-201ENST00000507986 352 ntBASIC6.6□□□□□ -1.35
CFTRP13569 RANP9-201ENST00000519957 271 ntBASIC6.6□□□□□ -1.35
CFTRP13569 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC6.6□□□□□ -1.35
CFTRP13569 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC6.6□□□□□ -1.35
CFTRP13569 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
CFTRP13569 AL137849.1-201ENST00000604767 169 ntBASIC6.6□□□□□ -1.35
CFTRP13569 AL137843.1-201ENST00000605078 385 ntBASIC6.6□□□□□ -1.35
CFTRP13569 AC015871.5-202ENST00000623252 701 ntBASIC6.6□□□□□ -1.35
CFTRP13569 AL669831.5-218ENST00000591702 1873 ntBASIC6.6□□□□□ -1.35
CFTRP13569 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
CFTRP13569 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
CFTRP13569 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
CFTRP13569 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC6.59□□□□□ -1.35
CFTRP13569 AC010300.1-201ENST00000600671 5134 ntBASIC6.59□□□□□ -1.35
CFTRP13569 SNORA3C-201ENST00000408792 125 ntBASIC6.59□□□□□ -1.36
CFTRP13569 AL121878.1-201ENST00000418638 859 ntBASIC6.59□□□□□ -1.36
CFTRP13569 AC004448.2-201ENST00000422360 586 ntBASIC6.59□□□□□ -1.36
CFTRP13569 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC6.59□□□□□ -1.36
CFTRP13569 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC6.59□□□□□ -1.36
CFTRP13569 APOOP2-201ENST00000461561 539 ntBASIC6.59□□□□□ -1.36
CFTRP13569 AL049873.1-201ENST00000480540 376 ntBASIC6.59□□□□□ -1.36
CFTRP13569 RPL7P24-201ENST00000493052 752 ntBASIC6.59□□□□□ -1.36
CFTRP13569 AC098799.1-201ENST00000504752 800 ntBASIC6.59□□□□□ -1.36
CFTRP13569 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC6.59□□□□□ -1.36
CFTRP13569 AC010503.3-201ENST00000594355 540 ntBASIC6.59□□□□□ -1.36
CFTRP13569 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC6.59□□□□□ -1.36
CFTRP13569 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC6.59□□□□□ -1.36
CFTRP13569 CR392039.4-201ENST00000624968 501 ntBASIC6.59□□□□□ -1.36
CFTRP13569 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC6.59□□□□□ -1.36
CFTRP13569 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC6.59□□□□□ -1.36
CFTRP13569 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
CFTRP13569 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.36
CFTRP13569 GVINP1-202ENST00000531871 7271 ntBASIC6.59□□□□□ -1.36
CFTRP13569 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CFTRP13569 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CFTRP13569 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CFTRP13569 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
CFTRP13569 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC6.58□□□□□ -1.36
CFTRP13569 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC6.58□□□□□ -1.36
CFTRP13569 DDX18P6-201ENST00000450119 1997 ntBASIC6.58□□□□□ -1.36
CFTRP13569 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
CFTRP13569 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
CFTRP13569 SNORA48.2-201ENST00000390926 124 ntBASIC6.58□□□□□ -1.36
CFTRP13569 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC6.58□□□□□ -1.36
CFTRP13569 ATP5JP1-201ENST00000431631 322 ntBASIC6.58□□□□□ -1.36
CFTRP13569 SNORA70.17-201ENST00000516449 133 ntBASIC6.58□□□□□ -1.36
CFTRP13569 CFL2-206ENST00000556161 546 ntTSL 4 BASIC6.58□□□□□ -1.36
CFTRP13569 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC6.58□□□□□ -1.36
CFTRP13569 AC012493.2-201ENST00000595083 291 ntBASIC6.58□□□□□ -1.36
CFTRP13569 AL355365.1-201ENST00000616480 294 ntBASIC6.58□□□□□ -1.36
CFTRP13569 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC6.58□□□□□ -1.36
CFTRP13569 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC6.58□□□□□ -1.36
CFTRP13569 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CFTRP13569 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
CFTRP13569 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CFTRP13569 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC6.57□□□□□ -1.36
CFTRP13569 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CFTRP13569 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CFTRP13569 SNORD9-201ENST00000362566 104 ntBASIC6.57□□□□□ -1.36
CFTRP13569 MIR128-1-201ENST00000384921 82 ntBASIC6.57□□□□□ -1.36
CFTRP13569 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC6.57□□□□□ -1.36
CFTRP13569 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC6.57□□□□□ -1.36
CFTRP13569 AC008802.1-201ENST00000519121 791 ntBASIC6.57□□□□□ -1.36
CFTRP13569 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC6.57□□□□□ -1.36
CFTRP13569 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC6.57□□□□□ -1.36
CFTRP13569 AC011816.2-201ENST00000607089 556 ntBASIC6.57□□□□□ -1.36
CFTRP13569 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC6.57□□□□□ -1.36
CFTRP13569 THAP12P5-201ENST00000405864 2275 ntBASIC6.57□□□□□ -1.36
CFTRP13569 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
CFTRP13569 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC6.57□□□□□ -1.36
CFTRP13569 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CFTRP13569 RPL7AP73-201ENST00000413490 353 ntBASIC6.56□□□□□ -1.36
CFTRP13569 RANP8-201ENST00000444720 713 ntBASIC6.56□□□□□ -1.36
CFTRP13569 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC6.56□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms