Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC5.62□□□□□ -1.51
CDK5RAP1Q96SZ6 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC5.62□□□□□ -1.51
CDK5RAP1Q96SZ6 DLEU2_1.1-201ENST00000612089 120 ntBASIC5.62□□□□□ -1.51
CDK5RAP1Q96SZ6 DLEU2_1.2-201ENST00000614667 120 ntBASIC5.62□□□□□ -1.51
CDK5RAP1Q96SZ6 AC004009.2-201ENST00000623016 728 ntBASIC5.62□□□□□ -1.51
CDK5RAP1Q96SZ6 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.62□□□□□ -1.51
CDK5RAP1Q96SZ6 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC5.62□□□□□ -1.51
CDK5RAP1Q96SZ6 AL133268.1-201ENST00000405676 1401 ntBASIC5.62□□□□□ -1.51
CDK5RAP1Q96SZ6 AC092447.7-201ENST00000422212 1621 ntBASIC5.62□□□□□ -1.51
CDK5RAP1Q96SZ6 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CDK5RAP1Q96SZ6 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC5.62□□□□□ -1.51
CDK5RAP1Q96SZ6 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
CDK5RAP1Q96SZ6 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.62□□□□□ -1.51
CDK5RAP1Q96SZ6 SMG1P7-201ENST00000565246 2704 ntBASIC5.61□□□□□ -1.51
CDK5RAP1Q96SZ6 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CDK5RAP1Q96SZ6 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
CDK5RAP1Q96SZ6 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CDK5RAP1Q96SZ6 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
CDK5RAP1Q96SZ6 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
CDK5RAP1Q96SZ6 RNU6-413P-201ENST00000384115 107 ntBASIC5.61□□□□□ -1.51
CDK5RAP1Q96SZ6 SNORA16A-201ENST00000384342 137 ntBASIC5.61□□□□□ -1.51
CDK5RAP1Q96SZ6 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
CDK5RAP1Q96SZ6 MTCO1P56-201ENST00000401674 224 ntBASIC5.61□□□□□ -1.51
CDK5RAP1Q96SZ6 RNU4-34P-201ENST00000410431 124 ntBASIC5.61□□□□□ -1.51
CDK5RAP1Q96SZ6 RPL7P8-201ENST00000411964 730 ntBASIC5.61□□□□□ -1.51
CDK5RAP1Q96SZ6 TCEA1P4-201ENST00000415066 844 ntBASIC5.61□□□□□ -1.51
CDK5RAP1Q96SZ6 OR4K6P-201ENST00000416478 897 ntBASIC5.61□□□□□ -1.51
CDK5RAP1Q96SZ6 AC096644.3-201ENST00000416788 338 ntBASIC5.61□□□□□ -1.51
CDK5RAP1Q96SZ6 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.61□□□□□ -1.51
CDK5RAP1Q96SZ6 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC5.61□□□□□ -1.51
CDK5RAP1Q96SZ6 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC5.61□□□□□ -1.51
CDK5RAP1Q96SZ6 AL627308.1-201ENST00000435693 821 ntBASIC5.61□□□□□ -1.51
CDK5RAP1Q96SZ6 MTCYBP34-201ENST00000439552 670 ntBASIC5.61□□□□□ -1.51
CDK5RAP1Q96SZ6 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC5.61□□□□□ -1.51
CDK5RAP1Q96SZ6 AC235565.1-201ENST00000456962 1325 ntBASIC5.61□□□□□ -1.51
CDK5RAP1Q96SZ6 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC5.61□□□□□ -1.51
CDK5RAP1Q96SZ6 AP000797.2-201ENST00000475768 606 ntBASIC5.61□□□□□ -1.51
CDK5RAP1Q96SZ6 ZNF90P1-201ENST00000480493 1951 ntBASIC5.61□□□□□ -1.51
CDK5RAP1Q96SZ6 RPL7P6-201ENST00000480903 738 ntBASIC5.61□□□□□ -1.51
CDK5RAP1Q96SZ6 AC079841.1-201ENST00000481228 950 ntBASIC5.61□□□□□ -1.51
CDK5RAP1Q96SZ6 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC5.61□□□□□ -1.51
CDK5RAP1Q96SZ6 AC008638.1-201ENST00000506035 866 ntBASIC5.61□□□□□ -1.51
CDK5RAP1Q96SZ6 AC006499.3-201ENST00000506077 748 ntBASIC5.61□□□□□ -1.51
CDK5RAP1Q96SZ6 HIGD1AP14-201ENST00000507617 282 ntBASIC5.61□□□□□ -1.51
CDK5RAP1Q96SZ6 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC5.61□□□□□ -1.51
CDK5RAP1Q96SZ6 AC116347.2-201ENST00000514912 523 ntBASIC5.61□□□□□ -1.51
CDK5RAP1Q96SZ6 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC5.61□□□□□ -1.51
CDK5RAP1Q96SZ6 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC5.61□□□□□ -1.51
CDK5RAP1Q96SZ6 AP000859.1-201ENST00000525536 307 ntBASIC5.61□□□□□ -1.51
CDK5RAP1Q96SZ6 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC5.61□□□□□ -1.51
CDK5RAP1Q96SZ6 YWHABP2-201ENST00000540201 713 ntBASIC5.61□□□□□ -1.51
CDK5RAP1Q96SZ6 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
CDK5RAP1Q96SZ6 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.61□□□□□ -1.51
CDK5RAP1Q96SZ6 AC004217.3-201ENST00000551552 878 ntBASIC5.61□□□□□ -1.51
CDK5RAP1Q96SZ6 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.61□□□□□ -1.51
CDK5RAP1Q96SZ6 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC5.61□□□□□ -1.51
CDK5RAP1Q96SZ6 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.61□□□□□ -1.51
CDK5RAP1Q96SZ6 MIR4999-201ENST00000585029 91 ntBASIC5.61□□□□□ -1.51
CDK5RAP1Q96SZ6 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.61□□□□□ -1.51
CDK5RAP1Q96SZ6 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.61□□□□□ -1.51
CDK5RAP1Q96SZ6 AC069307.1-201ENST00000602820 447 ntBASIC5.61□□□□□ -1.51
CDK5RAP1Q96SZ6 AC083899.3-201ENST00000603413 594 ntBASIC5.61□□□□□ -1.51
CDK5RAP1Q96SZ6 AC091805.2-201ENST00000603848 235 ntBASIC5.61□□□□□ -1.51
CDK5RAP1Q96SZ6 AP000907.4-201ENST00000604143 237 ntBASIC5.61□□□□□ -1.51
CDK5RAP1Q96SZ6 SDR42E1P1-201ENST00000611327 477 ntBASIC5.61□□□□□ -1.51
CDK5RAP1Q96SZ6 AL359697.1-201ENST00000624879 587 ntBASIC5.61□□□□□ -1.51
CDK5RAP1Q96SZ6 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC5.61□□□□□ -1.51
CDK5RAP1Q96SZ6 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
CDK5RAP1Q96SZ6 AC099654.12-201ENST00000639868 649 ntBASIC5.61□□□□□ -1.51
CDK5RAP1Q96SZ6 SAMMSON-227ENST00000642114 1199 ntBASIC5.61□□□□□ -1.51
CDK5RAP1Q96SZ6 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
CDK5RAP1Q96SZ6 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.61□□□□□ -1.51
CDK5RAP1Q96SZ6 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CDK5RAP1Q96SZ6 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CDK5RAP1Q96SZ6 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CDK5RAP1Q96SZ6 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
CDK5RAP1Q96SZ6 OR55B1P-203ENST00000641518 2602 ntBASIC5.61□□□□□ -1.51
CDK5RAP1Q96SZ6 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CDK5RAP1Q96SZ6 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
CDK5RAP1Q96SZ6 AC006484.1-201ENST00000435086 1884 ntBASIC5.6□□□□□ -1.51
CDK5RAP1Q96SZ6 AL132640.2-201ENST00000559968 1698 ntBASIC5.6□□□□□ -1.51
CDK5RAP1Q96SZ6 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
CDK5RAP1Q96SZ6 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.6□□□□□ -1.51
CDK5RAP1Q96SZ6 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC5.6□□□□□ -1.51
CDK5RAP1Q96SZ6 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
CDK5RAP1Q96SZ6 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CDK5RAP1Q96SZ6 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC5.6□□□□□ -1.51
CDK5RAP1Q96SZ6 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CDK5RAP1Q96SZ6 OR56B2P-201ENST00000317102 954 ntBASIC5.6□□□□□ -1.51
CDK5RAP1Q96SZ6 NACA3P-201ENST00000359690 648 ntBASIC5.6□□□□□ -1.51
CDK5RAP1Q96SZ6 RNU4-21P-201ENST00000362802 126 ntBASIC5.6□□□□□ -1.51
CDK5RAP1Q96SZ6 RNU6-249P-201ENST00000363016 102 ntBASIC5.6□□□□□ -1.51
CDK5RAP1Q96SZ6 RNU6-236P-201ENST00000363886 106 ntBASIC5.6□□□□□ -1.51
CDK5RAP1Q96SZ6 Y_RNA.192-201ENST00000363977 102 ntBASIC5.6□□□□□ -1.51
CDK5RAP1Q96SZ6 SNORA75-201ENST00000384158 137 ntBASIC5.6□□□□□ -1.51
CDK5RAP1Q96SZ6 MIR137-201ENST00000385223 102 ntBASIC5.6□□□□□ -1.51
CDK5RAP1Q96SZ6 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
CDK5RAP1Q96SZ6 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
CDK5RAP1Q96SZ6 TANK-203ENST00000402568 878 ntTSL 5 BASIC5.6□□□□□ -1.51
CDK5RAP1Q96SZ6 MIR1178-201ENST00000408396 91 ntBASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms