Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 RPL7P40-201ENST00000481703 745 ntBASIC6.14□□□□□ -1.43
CHAMP1Q96JM3 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC6.14□□□□□ -1.43
CHAMP1Q96JM3 HMGB3P13-201ENST00000511263 607 ntBASIC6.14□□□□□ -1.43
CHAMP1Q96JM3 AC010587.2-201ENST00000511727 448 ntBASIC6.14□□□□□ -1.43
CHAMP1Q96JM3 MTND6P2-201ENST00000512226 524 ntBASIC6.14□□□□□ -1.43
CHAMP1Q96JM3 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
CHAMP1Q96JM3 TBCA-206ENST00000518338 551 ntTSL 2 BASIC6.14□□□□□ -1.43
CHAMP1Q96JM3 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC6.14□□□□□ -1.43
CHAMP1Q96JM3 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC6.14□□□□□ -1.43
CHAMP1Q96JM3 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC6.14□□□□□ -1.43
CHAMP1Q96JM3 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC6.14□□□□□ -1.43
CHAMP1Q96JM3 NMNAT1P5-201ENST00000559657 841 ntBASIC6.14□□□□□ -1.43
CHAMP1Q96JM3 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC6.14□□□□□ -1.43
CHAMP1Q96JM3 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC6.14□□□□□ -1.43
CHAMP1Q96JM3 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC6.14□□□□□ -1.43
CHAMP1Q96JM3 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
CHAMP1Q96JM3 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC6.14□□□□□ -1.43
CHAMP1Q96JM3 AC069545.1-201ENST00000605671 358 ntBASIC6.14□□□□□ -1.43
CHAMP1Q96JM3 AC008083.4-201ENST00000615076 444 ntBASIC6.14□□□□□ -1.43
CHAMP1Q96JM3 AL607023.1-201ENST00000620045 248 ntBASIC6.14□□□□□ -1.43
CHAMP1Q96JM3 MIR6810-201ENST00000622701 70 ntBASIC6.14□□□□□ -1.43
CHAMP1Q96JM3 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC6.14□□□□□ -1.43
CHAMP1Q96JM3 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
CHAMP1Q96JM3 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC6.14□□□□□ -1.43
CHAMP1Q96JM3 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
CHAMP1Q96JM3 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
CHAMP1Q96JM3 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
CHAMP1Q96JM3 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CHAMP1Q96JM3 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CHAMP1Q96JM3 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC6.13□□□□□ -1.43
CHAMP1Q96JM3 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CHAMP1Q96JM3 AL672167.1-204ENST00000641875 3017 ntBASIC6.13□□□□□ -1.43
CHAMP1Q96JM3 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CHAMP1Q96JM3 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC6.13□□□□□ -1.43
CHAMP1Q96JM3 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CHAMP1Q96JM3 MIR589-201ENST00000385238 99 ntBASIC6.13□□□□□ -1.43
CHAMP1Q96JM3 RPL21P67-201ENST00000402896 478 ntBASIC6.13□□□□□ -1.43
CHAMP1Q96JM3 U3.32-201ENST00000408116 212 ntBASIC6.13□□□□□ -1.43
CHAMP1Q96JM3 AC092745.2-202ENST00000411880 369 ntBASIC6.13□□□□□ -1.43
CHAMP1Q96JM3 AL139128.1-201ENST00000413921 941 ntBASIC6.13□□□□□ -1.43
CHAMP1Q96JM3 AL596448.1-201ENST00000415024 392 ntBASIC6.13□□□□□ -1.43
CHAMP1Q96JM3 EIF4A1P7-201ENST00000421800 1220 ntBASIC6.13□□□□□ -1.43
CHAMP1Q96JM3 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC6.13□□□□□ -1.43
CHAMP1Q96JM3 AL022400.1-201ENST00000423946 935 ntBASIC6.13□□□□□ -1.43
CHAMP1Q96JM3 DPY19L1P2-201ENST00000426647 915 ntBASIC6.13□□□□□ -1.43
CHAMP1Q96JM3 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC6.13□□□□□ -1.43
CHAMP1Q96JM3 AP001324.1-201ENST00000428553 399 ntBASIC6.13□□□□□ -1.43
CHAMP1Q96JM3 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC6.13□□□□□ -1.43
CHAMP1Q96JM3 GSTM5P1-201ENST00000434751 660 ntBASIC6.13□□□□□ -1.43
CHAMP1Q96JM3 FTH1P16-201ENST00000435241 552 ntBASIC6.13□□□□□ -1.43
CHAMP1Q96JM3 RPL12P3-201ENST00000440080 396 ntBASIC6.13□□□□□ -1.43
CHAMP1Q96JM3 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC6.13□□□□□ -1.43
CHAMP1Q96JM3 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC6.13□□□□□ -1.43
CHAMP1Q96JM3 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC6.13□□□□□ -1.43
CHAMP1Q96JM3 AC098583.1-201ENST00000480875 255 ntBASIC6.13□□□□□ -1.43
CHAMP1Q96JM3 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC6.13□□□□□ -1.43
CHAMP1Q96JM3 ENPP7P11-201ENST00000505915 627 ntBASIC6.13□□□□□ -1.43
CHAMP1Q96JM3 CBX3P3-201ENST00000508108 532 ntBASIC6.13□□□□□ -1.43
CHAMP1Q96JM3 AC104108.1-201ENST00000509930 412 ntBASIC6.13□□□□□ -1.43
CHAMP1Q96JM3 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC6.13□□□□□ -1.43
CHAMP1Q96JM3 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC6.13□□□□□ -1.43
CHAMP1Q96JM3 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC6.13□□□□□ -1.43
CHAMP1Q96JM3 OR4C2P-201ENST00000530855 1064 ntBASIC6.13□□□□□ -1.43
CHAMP1Q96JM3 AC004825.1-201ENST00000555068 586 ntBASIC6.13□□□□□ -1.43
CHAMP1Q96JM3 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC6.13□□□□□ -1.43
CHAMP1Q96JM3 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC6.13□□□□□ -1.43
CHAMP1Q96JM3 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC6.13□□□□□ -1.43
CHAMP1Q96JM3 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC6.13□□□□□ -1.43
CHAMP1Q96JM3 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC6.13□□□□□ -1.43
CHAMP1Q96JM3 AC074051.3-201ENST00000570238 358 ntBASIC6.13□□□□□ -1.43
CHAMP1Q96JM3 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC6.13□□□□□ -1.43
CHAMP1Q96JM3 MIR3611-201ENST00000584484 83 ntBASIC6.13□□□□□ -1.43
CHAMP1Q96JM3 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC6.13□□□□□ -1.43
CHAMP1Q96JM3 AC018690.1-201ENST00000608144 626 ntBASIC6.13□□□□□ -1.43
CHAMP1Q96JM3 AC239868.4-201ENST00000608318 671 ntBASIC6.13□□□□□ -1.43
CHAMP1Q96JM3 AC011472.4-201ENST00000615848 491 ntBASIC6.13□□□□□ -1.43
CHAMP1Q96JM3 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC6.13□□□□□ -1.43
CHAMP1Q96JM3 MIR193BHG-214ENST00000641765 509 ntBASIC6.13□□□□□ -1.43
CHAMP1Q96JM3 MTND4P31-201ENST00000425607 1343 ntBASIC6.13□□□□□ -1.43
CHAMP1Q96JM3 MTCO1P6-201ENST00000481192 1384 ntBASIC6.13□□□□□ -1.43
CHAMP1Q96JM3 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CHAMP1Q96JM3 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC6.13□□□□□ -1.43
CHAMP1Q96JM3 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC6.13□□□□□ -1.43
CHAMP1Q96JM3 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
CHAMP1Q96JM3 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CHAMP1Q96JM3 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
CHAMP1Q96JM3 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC6.12□□□□□ -1.43
CHAMP1Q96JM3 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CHAMP1Q96JM3 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CHAMP1Q96JM3 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC6.12□□□□□ -1.43
CHAMP1Q96JM3 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CHAMP1Q96JM3 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CHAMP1Q96JM3 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CHAMP1Q96JM3 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CHAMP1Q96JM3 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CHAMP1Q96JM3 MED23-203ENST00000368058 4576 ntTSL 5 BASIC6.12□□□□□ -1.43
CHAMP1Q96JM3 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
CHAMP1Q96JM3 VDAC2P1-201ENST00000399358 958 ntBASIC6.12□□□□□ -1.43
CHAMP1Q96JM3 TANK-206ENST00000406287 875 ntTSL 5 BASIC6.12□□□□□ -1.43
CHAMP1Q96JM3 Y_RNA.604-201ENST00000410574 102 ntBASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms