Protein–RNA interactions for Protein: P41225

SOX3, Transcription factor SOX-3, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX3P41225 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.27□□□□□ -1.73
SOX3P41225 AC022022.1-201ENST00000430304 178 ntBASIC4.27□□□□□ -1.73
SOX3P41225 MTCO1P52-201ENST00000433928 531 ntBASIC4.27□□□□□ -1.73
SOX3P41225 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC4.27□□□□□ -1.73
SOX3P41225 AC044797.1-201ENST00000445744 679 ntBASIC4.27□□□□□ -1.73
SOX3P41225 AL589765.3-201ENST00000446084 462 ntBASIC4.27□□□□□ -1.73
SOX3P41225 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.27□□□□□ -1.73
SOX3P41225 AL591363.1-201ENST00000450091 483 ntBASIC4.27□□□□□ -1.73
SOX3P41225 MTATP6P14-201ENST00000455189 673 ntBASIC4.27□□□□□ -1.73
SOX3P41225 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.27□□□□□ -1.73
SOX3P41225 RN7SL41P-201ENST00000476144 297 ntBASIC4.27□□□□□ -1.73
SOX3P41225 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.27□□□□□ -1.73
SOX3P41225 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC4.27□□□□□ -1.73
SOX3P41225 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.27□□□□□ -1.73
SOX3P41225 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.27□□□□□ -1.73
SOX3P41225 AC007016.1-201ENST00000512110 244 ntBASIC4.27□□□□□ -1.73
SOX3P41225 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.27□□□□□ -1.73
SOX3P41225 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC4.27□□□□□ -1.73
SOX3P41225 AC010476.1-201ENST00000519111 851 ntBASIC4.27□□□□□ -1.73
SOX3P41225 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.27□□□□□ -1.73
SOX3P41225 HIGD1AP5-201ENST00000529959 259 ntBASIC4.27□□□□□ -1.73
SOX3P41225 AP001781.1-201ENST00000530977 207 ntBASIC4.27□□□□□ -1.73
SOX3P41225 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.27□□□□□ -1.73
SOX3P41225 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.27□□□□□ -1.73
SOX3P41225 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC4.27□□□□□ -1.73
SOX3P41225 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.27□□□□□ -1.73
SOX3P41225 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC4.27□□□□□ -1.73
SOX3P41225 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.27□□□□□ -1.73
SOX3P41225 AC209154.1-201ENST00000582156 337 ntBASIC4.27□□□□□ -1.73
SOX3P41225 SLC25A36P1-201ENST00000590111 465 ntBASIC4.27□□□□□ -1.73
SOX3P41225 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC4.27□□□□□ -1.73
SOX3P41225 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.27□□□□□ -1.73
SOX3P41225 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.27□□□□□ -1.73
SOX3P41225 AC093765.1-201ENST00000603758 881 ntBASIC4.27□□□□□ -1.73
SOX3P41225 AC233280.2-201ENST00000603917 1070 ntBASIC4.27□□□□□ -1.73
SOX3P41225 AC018618.2-201ENST00000604770 446 ntBASIC4.27□□□□□ -1.73
SOX3P41225 AL158050.2-201ENST00000605336 568 ntBASIC4.27□□□□□ -1.73
SOX3P41225 AC011374.2-201ENST00000607135 526 ntBASIC4.27□□□□□ -1.73
SOX3P41225 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.27□□□□□ -1.73
SOX3P41225 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.27□□□□□ -1.73
SOX3P41225 AC007342.8-201ENST00000623278 678 ntBASIC4.27□□□□□ -1.73
SOX3P41225 AC010435.1-201ENST00000623353 1177 ntBASIC4.27□□□□□ -1.73
SOX3P41225 AC090772.4-201ENST00000623599 362 ntBASIC4.27□□□□□ -1.73
SOX3P41225 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.27□□□□□ -1.73
SOX3P41225 AC055839.1-201ENST00000634467 498 ntBASIC4.27□□□□□ -1.73
SOX3P41225 AL356118.1-201ENST00000635272 1078 ntBASIC4.27□□□□□ -1.73
SOX3P41225 AC083865.1-201ENST00000636634 831 ntBASIC4.27□□□□□ -1.73
SOX3P41225 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SOX3P41225 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
SOX3P41225 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SOX3P41225 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SOX3P41225 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SOX3P41225 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.26□□□□□ -1.73
SOX3P41225 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SOX3P41225 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.26□□□□□ -1.73
SOX3P41225 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
SOX3P41225 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SOX3P41225 RNU6-185P-201ENST00000384421 107 ntBASIC4.26□□□□□ -1.73
SOX3P41225 MIR320B1-201ENST00000390209 79 ntBASIC4.26□□□□□ -1.73
SOX3P41225 AP002784.2-201ENST00000397300 549 ntBASIC4.26□□□□□ -1.73
SOX3P41225 MIR921-201ENST00000401133 56 ntBASIC4.26□□□□□ -1.73
SOX3P41225 HMGB1P13-201ENST00000406019 642 ntBASIC4.26□□□□□ -1.73
SOX3P41225 UBE2V1P11-201ENST00000411559 285 ntBASIC4.26□□□□□ -1.73
SOX3P41225 FAR2P2-201ENST00000413041 594 ntBASIC4.26□□□□□ -1.73
SOX3P41225 MTCO3P4-201ENST00000419236 787 ntBASIC4.26□□□□□ -1.73
SOX3P41225 PDSS1P1-201ENST00000422953 1114 ntBASIC4.26□□□□□ -1.73
SOX3P41225 FAR2P4-202ENST00000425399 584 ntBASIC4.26□□□□□ -1.73
SOX3P41225 FO393419.3-201ENST00000428741 282 ntBASIC4.26□□□□□ -1.73
SOX3P41225 AC068287.1-201ENST00000430283 295 ntBASIC4.26□□□□□ -1.73
SOX3P41225 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.26□□□□□ -1.73
SOX3P41225 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC4.26□□□□□ -1.73
SOX3P41225 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.26□□□□□ -1.73
SOX3P41225 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC4.26□□□□□ -1.73
SOX3P41225 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC4.26□□□□□ -1.73
SOX3P41225 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.26□□□□□ -1.73
SOX3P41225 AC002553.2-201ENST00000453217 340 ntBASIC4.26□□□□□ -1.73
SOX3P41225 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.26□□□□□ -1.73
SOX3P41225 snoU13.1-201ENST00000459157 104 ntBASIC4.26□□□□□ -1.73
SOX3P41225 RPS17P11-201ENST00000474297 293 ntBASIC4.26□□□□□ -1.73
SOX3P41225 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.26□□□□□ -1.73
SOX3P41225 AC098799.3-201ENST00000506095 438 ntBASIC4.26□□□□□ -1.73
SOX3P41225 RAB9BP1-201ENST00000519581 626 ntBASIC4.26□□□□□ -1.73
SOX3P41225 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC4.26□□□□□ -1.73
SOX3P41225 AC018442.3-201ENST00000523025 183 ntBASIC4.26□□□□□ -1.73
SOX3P41225 MTND1P6-201ENST00000523621 946 ntBASIC4.26□□□□□ -1.73
SOX3P41225 AC138701.1-201ENST00000524329 714 ntBASIC4.26□□□□□ -1.73
SOX3P41225 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.26□□□□□ -1.73
SOX3P41225 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.26□□□□□ -1.73
SOX3P41225 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC4.26□□□□□ -1.73
SOX3P41225 AC090666.1-201ENST00000578241 445 ntBASIC4.26□□□□□ -1.73
SOX3P41225 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC4.26□□□□□ -1.73
SOX3P41225 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.26□□□□□ -1.73
SOX3P41225 AC069061.3-201ENST00000582254 823 ntBASIC4.26□□□□□ -1.73
SOX3P41225 AC090330.1-201ENST00000588646 764 ntBASIC4.26□□□□□ -1.73
SOX3P41225 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.26□□□□□ -1.73
SOX3P41225 AC026790.2-201ENST00000606282 430 ntBASIC4.26□□□□□ -1.73
SOX3P41225 AC019193.2-201ENST00000610012 634 ntBASIC4.26□□□□□ -1.73
SOX3P41225 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC4.26□□□□□ -1.73
SOX3P41225 AL049536.1-201ENST00000625043 744 ntBASIC4.26□□□□□ -1.73
SOX3P41225 MIR7641-1-201ENST00000627518 61 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms