Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.25□□□□□ -1.73
LSM1O15116 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
LSM1O15116 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.25□□□□□ -1.73
LSM1O15116 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.24□□□□□ -1.73
LSM1O15116 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
LSM1O15116 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
LSM1O15116 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.24□□□□□ -1.73
LSM1O15116 MAPK10-253ENST00000641010 4072 ntBASIC4.24□□□□□ -1.73
LSM1O15116 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
LSM1O15116 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
LSM1O15116 HSPA8P1-201ENST00000425843 1833 ntBASIC4.24□□□□□ -1.73
LSM1O15116 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
LSM1O15116 AL049697.2-201ENST00000403708 294 ntBASIC4.24□□□□□ -1.73
LSM1O15116 MIR1911-201ENST00000410783 80 ntBASIC4.24□□□□□ -1.73
LSM1O15116 RN7SKP106-201ENST00000410832 272 ntBASIC4.24□□□□□ -1.73
LSM1O15116 RPS20P14-201ENST00000412545 360 ntBASIC4.24□□□□□ -1.73
LSM1O15116 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC4.24□□□□□ -1.73
LSM1O15116 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
LSM1O15116 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.24□□□□□ -1.73
LSM1O15116 SLC4A1APP1-201ENST00000419995 602 ntBASIC4.24□□□□□ -1.73
LSM1O15116 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC4.24□□□□□ -1.73
LSM1O15116 AC073069.1-201ENST00000428657 441 ntBASIC4.24□□□□□ -1.73
LSM1O15116 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.24□□□□□ -1.73
LSM1O15116 PRELID3BP10-201ENST00000431957 584 ntBASIC4.24□□□□□ -1.73
LSM1O15116 RPL7P31-201ENST00000450192 724 ntBASIC4.24□□□□□ -1.73
LSM1O15116 RPL7P61-201ENST00000451721 751 ntBASIC4.24□□□□□ -1.73
LSM1O15116 HMGB3P21-201ENST00000452483 547 ntBASIC4.24□□□□□ -1.73
LSM1O15116 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.24□□□□□ -1.73
LSM1O15116 RPS27AP17-201ENST00000463344 455 ntBASIC4.24□□□□□ -1.73
LSM1O15116 RN7SL329P-201ENST00000467740 299 ntBASIC4.24□□□□□ -1.73
LSM1O15116 AC011037.1-201ENST00000483964 558 ntBASIC4.24□□□□□ -1.73
LSM1O15116 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
LSM1O15116 AC021146.7-201ENST00000509604 775 ntBASIC4.24□□□□□ -1.73
LSM1O15116 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC4.24□□□□□ -1.73
LSM1O15116 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.24□□□□□ -1.73
LSM1O15116 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.24□□□□□ -1.73
LSM1O15116 MEG8-217ENST00000556637 924 ntTSL 5 BASIC4.24□□□□□ -1.73
LSM1O15116 AL360157.1-201ENST00000565962 87 ntBASIC4.24□□□□□ -1.73
LSM1O15116 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.24□□□□□ -1.73
LSM1O15116 MIR4716-201ENST00000579628 84 ntBASIC4.24□□□□□ -1.73
LSM1O15116 RN7SL690P-201ENST00000582087 240 ntBASIC4.24□□□□□ -1.73
LSM1O15116 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.24□□□□□ -1.73
LSM1O15116 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.24□□□□□ -1.73
LSM1O15116 AC009318.3-201ENST00000616916 503 ntBASIC4.24□□□□□ -1.73
LSM1O15116 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
LSM1O15116 AL445528.2-201ENST00000620582 470 ntBASIC4.24□□□□□ -1.73
LSM1O15116 AC006065.6-201ENST00000625201 545 ntBASIC4.24□□□□□ -1.73
LSM1O15116 AC009452.1-201ENST00000640823 606 ntBASIC4.24□□□□□ -1.73
LSM1O15116 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
LSM1O15116 FAM35DP-201ENST00000323387 2712 ntBASIC4.24□□□□□ -1.73
LSM1O15116 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
LSM1O15116 MTND4P10-201ENST00000446199 1363 ntBASIC4.24□□□□□ -1.73
LSM1O15116 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC4.24□□□□□ -1.73
LSM1O15116 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC4.24□□□□□ -1.73
LSM1O15116 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
LSM1O15116 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
LSM1O15116 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
LSM1O15116 AC131971.1-201ENST00000332881 1482 ntBASIC4.24□□□□□ -1.73
LSM1O15116 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.24□□□□□ -1.73
LSM1O15116 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
LSM1O15116 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
LSM1O15116 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
LSM1O15116 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC4.23□□□□□ -1.73
LSM1O15116 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
LSM1O15116 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
LSM1O15116 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
LSM1O15116 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.23□□□□□ -1.73
LSM1O15116 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.23□□□□□ -1.73
LSM1O15116 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
LSM1O15116 MIR298-201ENST00000401212 88 ntBASIC4.23□□□□□ -1.73
LSM1O15116 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC4.23□□□□□ -1.73
LSM1O15116 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC4.23□□□□□ -1.73
LSM1O15116 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC4.23□□□□□ -1.73
LSM1O15116 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC4.23□□□□□ -1.73
LSM1O15116 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
LSM1O15116 HLA-N-201ENST00000437516 135 ntBASIC4.23□□□□□ -1.73
LSM1O15116 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.23□□□□□ -1.73
LSM1O15116 AL157827.1-201ENST00000447622 132 ntBASIC4.23□□□□□ -1.73
LSM1O15116 ABCF2P2-201ENST00000450549 296 ntBASIC4.23□□□□□ -1.73
LSM1O15116 AC092324.1-201ENST00000468671 324 ntBASIC4.23□□□□□ -1.73
LSM1O15116 TSACC-207ENST00000470342 601 ntTSL 2 BASIC4.23□□□□□ -1.73
LSM1O15116 RPL12P20-201ENST00000475538 479 ntBASIC4.23□□□□□ -1.73
LSM1O15116 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC4.23□□□□□ -1.73
LSM1O15116 PHBP17-201ENST00000528576 541 ntBASIC4.23□□□□□ -1.73
LSM1O15116 AP001781.1-201ENST00000530977 207 ntBASIC4.23□□□□□ -1.73
LSM1O15116 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.23□□□□□ -1.73
LSM1O15116 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC4.23□□□□□ -1.73
LSM1O15116 ABI1P1-201ENST00000603375 1120 ntBASIC4.23□□□□□ -1.73
LSM1O15116 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC4.23□□□□□ -1.73
LSM1O15116 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC4.23□□□□□ -1.73
LSM1O15116 CCT5-215ENST00000625723 135 ntTSL 5 BASIC4.23□□□□□ -1.73
LSM1O15116 AC018555.1-201ENST00000567548 1980 ntBASIC4.23□□□□□ -1.73
LSM1O15116 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.23□□□□□ -1.73
LSM1O15116 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
LSM1O15116 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
LSM1O15116 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.22□□□□□ -1.73
LSM1O15116 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
LSM1O15116 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
LSM1O15116 AC092162.3-201ENST00000624511 1624 ntBASIC4.22□□□□□ -1.73
LSM1O15116 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms