Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 GMCL1P2-201ENST00000605230 823 ntBASIC5.11□□□□□ -1.59
CLIP2Q9UDT6 AC007620.3-201ENST00000608131 497 ntBASIC5.11□□□□□ -1.59
CLIP2Q9UDT6 AC015813.4-201ENST00000610469 179 ntBASIC5.11□□□□□ -1.59
CLIP2Q9UDT6 AC068831.8-201ENST00000620171 435 ntBASIC5.11□□□□□ -1.59
CLIP2Q9UDT6 AC067931.1-201ENST00000624190 671 ntBASIC5.11□□□□□ -1.59
CLIP2Q9UDT6 MFSD8-220ENST00000641243 1422 ntBASIC5.11□□□□□ -1.59
CLIP2Q9UDT6 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
CLIP2Q9UDT6 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
CLIP2Q9UDT6 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CLIP2Q9UDT6 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
CLIP2Q9UDT6 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC5.1□□□□□ -1.59
CLIP2Q9UDT6 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CLIP2Q9UDT6 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC5.1□□□□□ -1.59
CLIP2Q9UDT6 AC097374.1-203ENST00000400783 485 ntBASIC5.1□□□□□ -1.59
CLIP2Q9UDT6 AL356967.1-201ENST00000406305 431 ntBASIC5.1□□□□□ -1.59
CLIP2Q9UDT6 RFESDP1-201ENST00000422350 461 ntBASIC5.1□□□□□ -1.59
CLIP2Q9UDT6 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC5.1□□□□□ -1.59
CLIP2Q9UDT6 MTND2P2-201ENST00000434633 945 ntBASIC5.1□□□□□ -1.59
CLIP2Q9UDT6 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC5.1□□□□□ -1.59
CLIP2Q9UDT6 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC5.1□□□□□ -1.59
CLIP2Q9UDT6 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC5.1□□□□□ -1.59
CLIP2Q9UDT6 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC5.1□□□□□ -1.59
CLIP2Q9UDT6 HNRNPDLP3-201ENST00000456745 380 ntBASIC5.1□□□□□ -1.59
CLIP2Q9UDT6 AL672167.3-201ENST00000465951 960 ntBASIC5.1□□□□□ -1.59
CLIP2Q9UDT6 FTH1P2-201ENST00000466086 412 ntBASIC5.1□□□□□ -1.59
CLIP2Q9UDT6 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC5.1□□□□□ -1.59
CLIP2Q9UDT6 CCDC75P1-201ENST00000469247 791 ntBASIC5.1□□□□□ -1.59
CLIP2Q9UDT6 CREM-230ENST00000474931 626 ntTSL 2 BASIC5.1□□□□□ -1.59
CLIP2Q9UDT6 AC037198.2-201ENST00000478845 733 ntBASIC5.1□□□□□ -1.59
CLIP2Q9UDT6 AL161747.1-201ENST00000480068 358 ntBASIC5.1□□□□□ -1.59
CLIP2Q9UDT6 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
CLIP2Q9UDT6 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CLIP2Q9UDT6 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC5.1□□□□□ -1.59
CLIP2Q9UDT6 AC108475.1-201ENST00000507880 950 ntBASIC5.1□□□□□ -1.59
CLIP2Q9UDT6 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CLIP2Q9UDT6 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC5.1□□□□□ -1.59
CLIP2Q9UDT6 MRPL49P2-201ENST00000521066 465 ntBASIC5.1□□□□□ -1.59
CLIP2Q9UDT6 AP003730.1-201ENST00000524605 285 ntBASIC5.1□□□□□ -1.59
CLIP2Q9UDT6 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CLIP2Q9UDT6 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC5.1□□□□□ -1.59
CLIP2Q9UDT6 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC5.1□□□□□ -1.59
CLIP2Q9UDT6 AC021483.2-201ENST00000567415 758 ntBASIC5.1□□□□□ -1.59
CLIP2Q9UDT6 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC5.1□□□□□ -1.59
CLIP2Q9UDT6 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC5.1□□□□□ -1.59
CLIP2Q9UDT6 AC005261.4-201ENST00000600047 1385 ntBASIC5.1□□□□□ -1.59
CLIP2Q9UDT6 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
CLIP2Q9UDT6 AC025175.1-201ENST00000606482 759 ntBASIC5.1□□□□□ -1.59
CLIP2Q9UDT6 AL021997.2-201ENST00000615674 271 ntBASIC5.1□□□□□ -1.59
CLIP2Q9UDT6 AL138721.1-201ENST00000616756 179 ntBASIC5.1□□□□□ -1.59
CLIP2Q9UDT6 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC5.1□□□□□ -1.59
CLIP2Q9UDT6 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CLIP2Q9UDT6 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CLIP2Q9UDT6 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CLIP2Q9UDT6 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
CLIP2Q9UDT6 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
CLIP2Q9UDT6 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC5.1□□□□□ -1.59
CLIP2Q9UDT6 AP000756.2-201ENST00000624168 2567 ntBASIC5.1□□□□□ -1.59
CLIP2Q9UDT6 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
CLIP2Q9UDT6 RMST-202ENST00000541282 2099 ntTSL 2 BASIC5.09□□□□□ -1.59
CLIP2Q9UDT6 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CLIP2Q9UDT6 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CLIP2Q9UDT6 AC110792.3-201ENST00000595906 1614 ntBASIC5.09□□□□□ -1.59
CLIP2Q9UDT6 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CLIP2Q9UDT6 FTO-203ENST00000460382 1517 ntTSL 5 BASIC5.09□□□□□ -1.59
CLIP2Q9UDT6 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.59
CLIP2Q9UDT6 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CLIP2Q9UDT6 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC5.09□□□□□ -1.59
CLIP2Q9UDT6 MIR448-201ENST00000362131 111 ntBASIC5.09□□□□□ -1.59
CLIP2Q9UDT6 RNA5SP175-201ENST00000364275 119 ntBASIC5.09□□□□□ -1.59
CLIP2Q9UDT6 RNA5SP479-201ENST00000364858 117 ntBASIC5.09□□□□□ -1.59
CLIP2Q9UDT6 RNU1-44P-201ENST00000384453 163 ntBASIC5.09□□□□□ -1.59
CLIP2Q9UDT6 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC5.09□□□□□ -1.59
CLIP2Q9UDT6 MFSD13B-201ENST00000420133 1290 ntBASIC5.09□□□□□ -1.59
CLIP2Q9UDT6 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC5.09□□□□□ -1.59
CLIP2Q9UDT6 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CLIP2Q9UDT6 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC5.09□□□□□ -1.59
CLIP2Q9UDT6 AC069285.2-201ENST00000440210 275 ntBASIC5.09□□□□□ -1.59
CLIP2Q9UDT6 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CLIP2Q9UDT6 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC5.09□□□□□ -1.59
CLIP2Q9UDT6 RAD1P2-201ENST00000446414 663 ntBASIC5.09□□□□□ -1.59
CLIP2Q9UDT6 CCRL1P1-201ENST00000449542 1053 ntBASIC5.09□□□□□ -1.59
CLIP2Q9UDT6 AC009963.2-201ENST00000453431 138 ntBASIC5.09□□□□□ -1.59
CLIP2Q9UDT6 STRADBP1-201ENST00000478954 1281 ntBASIC5.09□□□□□ -1.59
CLIP2Q9UDT6 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC5.09□□□□□ -1.59
CLIP2Q9UDT6 ATG10-AS1-201ENST00000504846 648 ntBASIC5.09□□□□□ -1.59
CLIP2Q9UDT6 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CLIP2Q9UDT6 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC5.09□□□□□ -1.59
CLIP2Q9UDT6 RNA5SP154-201ENST00000516193 111 ntBASIC5.09□□□□□ -1.59
CLIP2Q9UDT6 RNA5SP49-201ENST00000516450 115 ntBASIC5.09□□□□□ -1.59
CLIP2Q9UDT6 RN7SKP21-201ENST00000516503 220 ntBASIC5.09□□□□□ -1.59
CLIP2Q9UDT6 AC022784.5-201ENST00000522241 437 ntBASIC5.09□□□□□ -1.59
CLIP2Q9UDT6 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC5.09□□□□□ -1.59
CLIP2Q9UDT6 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC5.09□□□□□ -1.59
CLIP2Q9UDT6 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC5.09□□□□□ -1.59
CLIP2Q9UDT6 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC5.09□□□□□ -1.59
CLIP2Q9UDT6 AL109766.1-201ENST00000555080 552 ntBASIC5.09□□□□□ -1.59
CLIP2Q9UDT6 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC5.09□□□□□ -1.59
CLIP2Q9UDT6 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CLIP2Q9UDT6 AC068724.3-201ENST00000625906 87 ntBASIC5.09□□□□□ -1.59
CLIP2Q9UDT6 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms