Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
KRTAP4-3Q9BYR4 KIF4A-201ENST00000374403 4348 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
KRTAP4-3Q9BYR4 CLRN1-202ENST00000327047 2359 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
KRTAP4-3Q9BYR4 THRB-202ENST00000356447 6345 ntAPPRIS P2 TSL 1 (best) BASIC2.34□□□□□ -2.03
KRTAP4-3Q9BYR4 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
KRTAP4-3Q9BYR4 ZNF841-201ENST00000389534 3503 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
KRTAP4-3Q9BYR4 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
KRTAP4-3Q9BYR4 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
KRTAP4-3Q9BYR4 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
KRTAP4-3Q9BYR4 Y_RNA.64-201ENST00000362845 102 ntBASIC2.34□□□□□ -2.03
KRTAP4-3Q9BYR4 Y_RNA.240-201ENST00000364469 95 ntBASIC2.34□□□□□ -2.03
KRTAP4-3Q9BYR4 Y_RNA.301-201ENST00000364990 103 ntBASIC2.34□□□□□ -2.03
KRTAP4-3Q9BYR4 Y_RNA.302-201ENST00000364997 102 ntBASIC2.34□□□□□ -2.03
KRTAP4-3Q9BYR4 RN7SKP189-201ENST00000365042 330 ntBASIC2.34□□□□□ -2.03
KRTAP4-3Q9BYR4 RNU1-115P-201ENST00000365329 160 ntBASIC2.34□□□□□ -2.03
KRTAP4-3Q9BYR4 Y_RNA.352-201ENST00000365439 102 ntBASIC2.34□□□□□ -2.03
KRTAP4-3Q9BYR4 SNORA64.3-201ENST00000365647 134 ntBASIC2.34□□□□□ -2.03
KRTAP4-3Q9BYR4 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
KRTAP4-3Q9BYR4 OR52E6-202ENST00000379946 954 ntBASIC2.34□□□□□ -2.03
KRTAP4-3Q9BYR4 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
KRTAP4-3Q9BYR4 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
KRTAP4-3Q9BYR4 SNORA22-201ENST00000383907 134 ntBASIC2.34□□□□□ -2.03
KRTAP4-3Q9BYR4 Y_RNA.495-201ENST00000384435 112 ntBASIC2.34□□□□□ -2.03
KRTAP4-3Q9BYR4 AC121334.1-201ENST00000396414 802 ntBASIC2.34□□□□□ -2.03
KRTAP4-3Q9BYR4 AL034417.1-201ENST00000399343 800 ntBASIC2.34□□□□□ -2.03
KRTAP4-3Q9BYR4 RPS4XP8-201ENST00000402039 771 ntBASIC2.34□□□□□ -2.03
KRTAP4-3Q9BYR4 AL355375.1-201ENST00000405686 392 ntBASIC2.34□□□□□ -2.03
KRTAP4-3Q9BYR4 NACAP7-201ENST00000407371 609 ntBASIC2.34□□□□□ -2.03
KRTAP4-3Q9BYR4 RNU6-1064P-201ENST00000410626 104 ntBASIC2.34□□□□□ -2.03
KRTAP4-3Q9BYR4 RNU6-1135P-201ENST00000411083 103 ntBASIC2.34□□□□□ -2.03
KRTAP4-3Q9BYR4 RNU6-592P-201ENST00000411333 103 ntBASIC2.34□□□□□ -2.03
KRTAP4-3Q9BYR4 RNU6-954P-201ENST00000411355 107 ntBASIC2.34□□□□□ -2.03
KRTAP4-3Q9BYR4 RPL23AP36-201ENST00000413895 458 ntBASIC2.34□□□□□ -2.03
KRTAP4-3Q9BYR4 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC2.34□□□□□ -2.03
KRTAP4-3Q9BYR4 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC2.34□□□□□ -2.03
KRTAP4-3Q9BYR4 AC093155.2-201ENST00000420734 937 ntBASIC2.34□□□□□ -2.03
KRTAP4-3Q9BYR4 CDC42P6-201ENST00000421246 576 ntBASIC2.34□□□□□ -2.03
KRTAP4-3Q9BYR4 SPATA20P1-201ENST00000423089 438 ntBASIC2.34□□□□□ -2.03
KRTAP4-3Q9BYR4 RBMY1KP-201ENST00000423480 476 ntBASIC2.34□□□□□ -2.03
KRTAP4-3Q9BYR4 DUTP6-201ENST00000425573 462 ntBASIC2.34□□□□□ -2.03
KRTAP4-3Q9BYR4 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC2.34□□□□□ -2.03
KRTAP4-3Q9BYR4 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC2.34□□□□□ -2.03
KRTAP4-3Q9BYR4 PUDPP2-201ENST00000431423 643 ntBASIC2.34□□□□□ -2.03
KRTAP4-3Q9BYR4 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC2.34□□□□□ -2.03
KRTAP4-3Q9BYR4 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC2.34□□□□□ -2.03
KRTAP4-3Q9BYR4 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC2.34□□□□□ -2.03
KRTAP4-3Q9BYR4 AL445687.1-201ENST00000439946 251 ntBASIC2.34□□□□□ -2.03
KRTAP4-3Q9BYR4 AL031681.1-201ENST00000443304 400 ntBASIC2.34□□□□□ -2.03
KRTAP4-3Q9BYR4 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC2.34□□□□□ -2.03
KRTAP4-3Q9BYR4 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC2.34□□□□□ -2.03
KRTAP4-3Q9BYR4 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC2.34□□□□□ -2.03
KRTAP4-3Q9BYR4 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
KRTAP4-3Q9BYR4 PFN1P11-201ENST00000445829 389 ntBASIC2.34□□□□□ -2.03
KRTAP4-3Q9BYR4 PRDX1P1-201ENST00000449329 596 ntBASIC2.34□□□□□ -2.03
KRTAP4-3Q9BYR4 AL591363.1-201ENST00000450091 483 ntBASIC2.34□□□□□ -2.03
KRTAP4-3Q9BYR4 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC2.34□□□□□ -2.03
KRTAP4-3Q9BYR4 AL391422.2-202ENST00000454396 347 ntTSL 5 BASIC2.34□□□□□ -2.03
KRTAP4-3Q9BYR4 AC244505.3-201ENST00000454598 187 ntBASIC2.34□□□□□ -2.03
KRTAP4-3Q9BYR4 AC099670.1-201ENST00000455141 783 ntBASIC2.34□□□□□ -2.03
KRTAP4-3Q9BYR4 C1DP4-201ENST00000455429 424 ntBASIC2.34□□□□□ -2.03
KRTAP4-3Q9BYR4 AC112492.4-201ENST00000456549 352 ntBASIC2.34□□□□□ -2.03
KRTAP4-3Q9BYR4 AC093627.1-201ENST00000465755 877 ntTSL 3 BASIC2.34□□□□□ -2.03
KRTAP4-3Q9BYR4 RPS4XP17-201ENST00000479057 754 ntBASIC2.34□□□□□ -2.03
KRTAP4-3Q9BYR4 GAPDHP39-201ENST00000481866 979 ntBASIC2.34□□□□□ -2.03
KRTAP4-3Q9BYR4 RN7SL797P-201ENST00000486314 297 ntBASIC2.34□□□□□ -2.03
KRTAP4-3Q9BYR4 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC2.34□□□□□ -2.03
KRTAP4-3Q9BYR4 TRBVA-201ENST00000498804 316 ntBASIC2.34□□□□□ -2.03
KRTAP4-3Q9BYR4 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC2.34□□□□□ -2.03
KRTAP4-3Q9BYR4 AC022447.4-201ENST00000504053 364 ntBASIC2.34□□□□□ -2.03
KRTAP4-3Q9BYR4 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC2.34□□□□□ -2.03
KRTAP4-3Q9BYR4 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
KRTAP4-3Q9BYR4 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC2.34□□□□□ -2.03
KRTAP4-3Q9BYR4 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC2.34□□□□□ -2.03
KRTAP4-3Q9BYR4 AC108120.2-201ENST00000512973 294 ntBASIC2.34□□□□□ -2.03
KRTAP4-3Q9BYR4 ATG10-208ENST00000513634 618 ntTSL 2 BASIC2.34□□□□□ -2.03
KRTAP4-3Q9BYR4 AC093816.1-201ENST00000515076 913 ntBASIC2.34□□□□□ -2.03
KRTAP4-3Q9BYR4 AC093878.1-201ENST00000515630 432 ntBASIC2.34□□□□□ -2.03
KRTAP4-3Q9BYR4 RNA5SP395-201ENST00000516567 118 ntBASIC2.34□□□□□ -2.03
KRTAP4-3Q9BYR4 Y_RNA.715-201ENST00000517082 110 ntBASIC2.34□□□□□ -2.03
KRTAP4-3Q9BYR4 RN7SKP183-201ENST00000517169 324 ntBASIC2.34□□□□□ -2.03
KRTAP4-3Q9BYR4 snoMBII-202.2-201ENST00000517263 86 ntBASIC2.34□□□□□ -2.03
KRTAP4-3Q9BYR4 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC2.34□□□□□ -2.03
KRTAP4-3Q9BYR4 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC2.34□□□□□ -2.03
KRTAP4-3Q9BYR4 TRIM77BP-201ENST00000524985 1119 ntBASIC2.34□□□□□ -2.03
KRTAP4-3Q9BYR4 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC2.34□□□□□ -2.03
KRTAP4-3Q9BYR4 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC2.34□□□□□ -2.03
KRTAP4-3Q9BYR4 HIGD1AP5-201ENST00000529959 259 ntBASIC2.34□□□□□ -2.03
KRTAP4-3Q9BYR4 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC2.34□□□□□ -2.03
KRTAP4-3Q9BYR4 AC103843.2-201ENST00000530523 682 ntBASIC2.34□□□□□ -2.03
KRTAP4-3Q9BYR4 RPL27A-211ENST00000532359 406 ntTSL 2 BASIC2.34□□□□□ -2.03
KRTAP4-3Q9BYR4 AC007068.2-201ENST00000543168 395 ntBASIC2.34□□□□□ -2.03
KRTAP4-3Q9BYR4 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC2.34□□□□□ -2.03
KRTAP4-3Q9BYR4 NCAPGP2-201ENST00000557911 754 ntBASIC2.34□□□□□ -2.03
KRTAP4-3Q9BYR4 GOLGA6L5P-203ENST00000559768 578 ntTSL 4 BASIC2.34□□□□□ -2.03
KRTAP4-3Q9BYR4 NDUFB4P11-201ENST00000560510 395 ntBASIC2.34□□□□□ -2.03
KRTAP4-3Q9BYR4 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC2.34□□□□□ -2.03
KRTAP4-3Q9BYR4 HNRNPCP4-201ENST00000571636 900 ntBASIC2.34□□□□□ -2.03
KRTAP4-3Q9BYR4 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC2.34□□□□□ -2.03
KRTAP4-3Q9BYR4 GLUD1P4-201ENST00000590914 418 ntBASIC2.34□□□□□ -2.03
KRTAP4-3Q9BYR4 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms