Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 BX323845.1-201ENST00000432417 179 ntBASIC4.69□□□□□ -1.66
VMP1Q96GC9 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.69□□□□□ -1.66
VMP1Q96GC9 MTND4P15-201ENST00000437913 1033 ntBASIC4.69□□□□□ -1.66
VMP1Q96GC9 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.69□□□□□ -1.66
VMP1Q96GC9 IGHV5-78-201ENST00000450948 295 ntBASIC4.69□□□□□ -1.66
VMP1Q96GC9 AL353718.1-201ENST00000451028 517 ntBASIC4.69□□□□□ -1.66
VMP1Q96GC9 CEACAMP6-201ENST00000452007 574 ntBASIC4.69□□□□□ -1.66
VMP1Q96GC9 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.69□□□□□ -1.66
VMP1Q96GC9 snoU13.20-201ENST00000459180 104 ntBASIC4.69□□□□□ -1.66
VMP1Q96GC9 AC126121.1-201ENST00000482313 553 ntBASIC4.69□□□□□ -1.66
VMP1Q96GC9 AC073522.1-201ENST00000483312 377 ntBASIC4.69□□□□□ -1.66
VMP1Q96GC9 AC140172.1-201ENST00000502928 141 ntBASIC4.69□□□□□ -1.66
VMP1Q96GC9 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC4.69□□□□□ -1.66
VMP1Q96GC9 RNA5SP43-201ENST00000516559 110 ntBASIC4.69□□□□□ -1.66
VMP1Q96GC9 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC4.69□□□□□ -1.66
VMP1Q96GC9 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC4.69□□□□□ -1.66
VMP1Q96GC9 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.69□□□□□ -1.66
VMP1Q96GC9 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC4.69□□□□□ -1.66
VMP1Q96GC9 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC4.69□□□□□ -1.66
VMP1Q96GC9 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC4.69□□□□□ -1.66
VMP1Q96GC9 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.69□□□□□ -1.66
VMP1Q96GC9 AC012254.4-201ENST00000588843 273 ntBASIC4.69□□□□□ -1.66
VMP1Q96GC9 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.69□□□□□ -1.66
VMP1Q96GC9 VN1R79P-201ENST00000593540 513 ntBASIC4.69□□□□□ -1.66
VMP1Q96GC9 AC011487.3-201ENST00000593607 453 ntBASIC4.69□□□□□ -1.66
VMP1Q96GC9 EIF1P6-201ENST00000600054 334 ntBASIC4.69□□□□□ -1.66
VMP1Q96GC9 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.69□□□□□ -1.66
VMP1Q96GC9 AC133644.2-201ENST00000608142 540 ntBASIC4.69□□□□□ -1.66
VMP1Q96GC9 AC107308.1-201ENST00000615897 301 ntBASIC4.69□□□□□ -1.66
VMP1Q96GC9 AL163051.2-201ENST00000618976 735 ntBASIC4.69□□□□□ -1.66
VMP1Q96GC9 AC073569.3-201ENST00000619055 682 ntBASIC4.69□□□□□ -1.66
VMP1Q96GC9 AP006248.3-201ENST00000623580 594 ntBASIC4.69□□□□□ -1.66
VMP1Q96GC9 AL049536.1-201ENST00000625043 744 ntBASIC4.69□□□□□ -1.66
VMP1Q96GC9 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
VMP1Q96GC9 ASNSP1-204ENST00000641977 1664 ntBASIC4.69□□□□□ -1.66
VMP1Q96GC9 AC025031.4-201ENST00000621248 3271 ntBASIC4.69□□□□□ -1.66
VMP1Q96GC9 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.69□□□□□ -1.66
VMP1Q96GC9 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
VMP1Q96GC9 INTS6P1-201ENST00000504674 2530 ntBASIC4.69□□□□□ -1.66
VMP1Q96GC9 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.69□□□□□ -1.66
VMP1Q96GC9 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
VMP1Q96GC9 KPNA2P2-201ENST00000419546 1489 ntBASIC4.69□□□□□ -1.66
VMP1Q96GC9 NMD3P1-201ENST00000439704 1488 ntBASIC4.69□□□□□ -1.66
VMP1Q96GC9 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
VMP1Q96GC9 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.68□□□□□ -1.66
VMP1Q96GC9 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
VMP1Q96GC9 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
VMP1Q96GC9 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
VMP1Q96GC9 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
VMP1Q96GC9 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
VMP1Q96GC9 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.68□□□□□ -1.66
VMP1Q96GC9 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.68□□□□□ -1.66
VMP1Q96GC9 NSRP1P1-201ENST00000444067 1693 ntBASIC4.68□□□□□ -1.66
VMP1Q96GC9 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
VMP1Q96GC9 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.68□□□□□ -1.66
VMP1Q96GC9 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
VMP1Q96GC9 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.68□□□□□ -1.66
VMP1Q96GC9 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
VMP1Q96GC9 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
VMP1Q96GC9 RN7SKP104-201ENST00000362605 328 ntBASIC4.68□□□□□ -1.66
VMP1Q96GC9 RNA5SP123-201ENST00000363244 119 ntBASIC4.68□□□□□ -1.66
VMP1Q96GC9 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.68□□□□□ -1.66
VMP1Q96GC9 RNU6-1293P-201ENST00000384077 107 ntBASIC4.68□□□□□ -1.66
VMP1Q96GC9 SNORA70E-201ENST00000384492 135 ntBASIC4.68□□□□□ -1.66
VMP1Q96GC9 AL021331.1-201ENST00000402817 582 ntBASIC4.68□□□□□ -1.66
VMP1Q96GC9 SNORA77-201ENST00000408716 125 ntBASIC4.68□□□□□ -1.66
VMP1Q96GC9 AL158825.1-201ENST00000414735 521 ntBASIC4.68□□□□□ -1.66
VMP1Q96GC9 VN1R42P-201ENST00000424651 344 ntBASIC4.68□□□□□ -1.66
VMP1Q96GC9 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC4.68□□□□□ -1.66
VMP1Q96GC9 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC4.68□□□□□ -1.66
VMP1Q96GC9 RHOT1P3-201ENST00000436571 331 ntBASIC4.68□□□□□ -1.66
VMP1Q96GC9 PSMD10P3-201ENST00000437000 448 ntBASIC4.68□□□□□ -1.66
VMP1Q96GC9 PRPF38AP2-201ENST00000438179 851 ntBASIC4.68□□□□□ -1.66
VMP1Q96GC9 UBE2V1P5-201ENST00000440070 405 ntBASIC4.68□□□□□ -1.66
VMP1Q96GC9 RPS29P9-201ENST00000440360 171 ntBASIC4.68□□□□□ -1.66
VMP1Q96GC9 AL137845.2-201ENST00000444292 988 ntBASIC4.68□□□□□ -1.66
VMP1Q96GC9 TRY2P-201ENST00000448860 689 ntBASIC4.68□□□□□ -1.66
VMP1Q96GC9 RPL7P61-201ENST00000451721 751 ntBASIC4.68□□□□□ -1.66
VMP1Q96GC9 AC005412.2-201ENST00000492004 341 ntBASIC4.68□□□□□ -1.66
VMP1Q96GC9 AC104108.1-201ENST00000509930 412 ntBASIC4.68□□□□□ -1.66
VMP1Q96GC9 AC025768.1-201ENST00000510057 267 ntBASIC4.68□□□□□ -1.66
VMP1Q96GC9 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.68□□□□□ -1.66
VMP1Q96GC9 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC4.68□□□□□ -1.66
VMP1Q96GC9 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC4.68□□□□□ -1.66
VMP1Q96GC9 EDDM3DP-201ENST00000554692 434 ntBASIC4.68□□□□□ -1.66
VMP1Q96GC9 SERPINE4P-201ENST00000554978 281 ntBASIC4.68□□□□□ -1.66
VMP1Q96GC9 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC4.68□□□□□ -1.66
VMP1Q96GC9 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.68□□□□□ -1.66
VMP1Q96GC9 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.68□□□□□ -1.66
VMP1Q96GC9 MEMO1P5-201ENST00000604810 406 ntBASIC4.68□□□□□ -1.66
VMP1Q96GC9 RMST_10.1-201ENST00000616309 154 ntBASIC4.68□□□□□ -1.66
VMP1Q96GC9 AC234782.5-201ENST00000617723 324 ntBASIC4.68□□□□□ -1.66
VMP1Q96GC9 AC009237.17-201ENST00000618111 748 ntBASIC4.68□□□□□ -1.66
VMP1Q96GC9 AL713922.2-201ENST00000619384 716 ntBASIC4.68□□□□□ -1.66
VMP1Q96GC9 RNU6-156P-201ENST00000621869 107 ntBASIC4.68□□□□□ -1.66
VMP1Q96GC9 C2orf27A-204ENST00000623058 969 ntBASIC4.68□□□□□ -1.66
VMP1Q96GC9 AC112694.2-201ENST00000623697 768 ntBASIC4.68□□□□□ -1.66
VMP1Q96GC9 AP003400.6-201ENST00000624698 740 ntBASIC4.68□□□□□ -1.66
VMP1Q96GC9 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
VMP1Q96GC9 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms