Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 AC005410.1-202ENST00000460347 485 ntBASIC6.01□□□□□ -1.45
CHMP4CQ96CF2 GYG1P1-201ENST00000460864 698 ntBASIC6.01□□□□□ -1.45
CHMP4CQ96CF2 IGLV2-34-201ENST00000490007 283 ntBASIC6.01□□□□□ -1.45
CHMP4CQ96CF2 EEF1A1P25-201ENST00000495704 1267 ntBASIC6.01□□□□□ -1.45
CHMP4CQ96CF2 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CHMP4CQ96CF2 AC010350.1-201ENST00000504908 231 ntBASIC6.01□□□□□ -1.45
CHMP4CQ96CF2 AC098799.3-201ENST00000506095 438 ntBASIC6.01□□□□□ -1.45
CHMP4CQ96CF2 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC6.01□□□□□ -1.45
CHMP4CQ96CF2 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC6.01□□□□□ -1.45
CHMP4CQ96CF2 RAD21-204ENST00000518055 896 ntTSL 2 BASIC6.01□□□□□ -1.45
CHMP4CQ96CF2 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC6.01□□□□□ -1.45
CHMP4CQ96CF2 IGJP1-201ENST00000522682 475 ntBASIC6.01□□□□□ -1.45
CHMP4CQ96CF2 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC6.01□□□□□ -1.45
CHMP4CQ96CF2 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC6.01□□□□□ -1.45
CHMP4CQ96CF2 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC6.01□□□□□ -1.45
CHMP4CQ96CF2 NOP10-202ENST00000557912 436 ntTSL 2 BASIC6.01□□□□□ -1.45
CHMP4CQ96CF2 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC6.01□□□□□ -1.45
CHMP4CQ96CF2 DPRXP4-201ENST00000578053 568 ntBASIC6.01□□□□□ -1.45
CHMP4CQ96CF2 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC6.01□□□□□ -1.45
CHMP4CQ96CF2 MIR4646-201ENST00000580775 63 ntBASIC6.01□□□□□ -1.45
CHMP4CQ96CF2 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC6.01□□□□□ -1.45
CHMP4CQ96CF2 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC6.01□□□□□ -1.45
CHMP4CQ96CF2 AL138478.1-201ENST00000612252 832 ntBASIC6.01□□□□□ -1.45
CHMP4CQ96CF2 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC6.01□□□□□ -1.45
CHMP4CQ96CF2 EIF3FP1-201ENST00000613970 806 ntBASIC6.01□□□□□ -1.45
CHMP4CQ96CF2 AC013470.4-201ENST00000619978 986 ntBASIC6.01□□□□□ -1.45
CHMP4CQ96CF2 AC016717.3-201ENST00000624730 554 ntBASIC6.01□□□□□ -1.45
CHMP4CQ96CF2 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC6.01□□□□□ -1.45
CHMP4CQ96CF2 ATE1-AS1-202ENST00000636460 506 ntBASIC6.01□□□□□ -1.45
CHMP4CQ96CF2 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC6.01□□□□□ -1.45
CHMP4CQ96CF2 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
CHMP4CQ96CF2 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
CHMP4CQ96CF2 MTND4P10-201ENST00000446199 1363 ntBASIC6.01□□□□□ -1.45
CHMP4CQ96CF2 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
CHMP4CQ96CF2 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC6.01□□□□□ -1.45
CHMP4CQ96CF2 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC6.01□□□□□ -1.45
CHMP4CQ96CF2 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CHMP4CQ96CF2 MED23-203ENST00000368058 4576 ntTSL 5 BASIC6.01□□□□□ -1.45
CHMP4CQ96CF2 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC6.01□□□□□ -1.45
CHMP4CQ96CF2 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
CHMP4CQ96CF2 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC6□□□□□ -1.45
CHMP4CQ96CF2 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
CHMP4CQ96CF2 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC6□□□□□ -1.45
CHMP4CQ96CF2 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC6□□□□□ -1.45
CHMP4CQ96CF2 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
CHMP4CQ96CF2 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC6□□□□□ -1.45
CHMP4CQ96CF2 RNU4-44P-201ENST00000363050 141 ntBASIC6□□□□□ -1.45
CHMP4CQ96CF2 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC6□□□□□ -1.45
CHMP4CQ96CF2 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
CHMP4CQ96CF2 SNORA2.3-201ENST00000383920 135 ntBASIC6□□□□□ -1.45
CHMP4CQ96CF2 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC6□□□□□ -1.45
CHMP4CQ96CF2 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC6□□□□□ -1.45
CHMP4CQ96CF2 Z75741.2-201ENST00000417272 1167 ntBASIC6□□□□□ -1.45
CHMP4CQ96CF2 MTCO2P21-201ENST00000419780 677 ntBASIC6□□□□□ -1.45
CHMP4CQ96CF2 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC6□□□□□ -1.45
CHMP4CQ96CF2 AC073069.1-201ENST00000428657 441 ntBASIC6□□□□□ -1.45
CHMP4CQ96CF2 CETN4P-201ENST00000432407 469 ntBASIC6□□□□□ -1.45
CHMP4CQ96CF2 AC084290.1-201ENST00000434995 374 ntBASIC6□□□□□ -1.45
CHMP4CQ96CF2 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC6□□□□□ -1.45
CHMP4CQ96CF2 AC012512.1-201ENST00000446594 718 ntBASIC6□□□□□ -1.45
CHMP4CQ96CF2 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC6□□□□□ -1.45
CHMP4CQ96CF2 AL591623.2-201ENST00000449978 222 ntBASIC6□□□□□ -1.45
CHMP4CQ96CF2 AC243772.1-201ENST00000451620 410 ntBASIC6□□□□□ -1.45
CHMP4CQ96CF2 AL645937.3-201ENST00000453647 936 ntBASIC6□□□□□ -1.45
CHMP4CQ96CF2 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC6□□□□□ -1.45
CHMP4CQ96CF2 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC6□□□□□ -1.45
CHMP4CQ96CF2 CREM-238ENST00000488741 651 ntTSL 2 BASIC6□□□□□ -1.45
CHMP4CQ96CF2 AC005912.1-201ENST00000495392 255 ntBASIC6□□□□□ -1.45
CHMP4CQ96CF2 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC6□□□□□ -1.45
CHMP4CQ96CF2 IGBP1P5-201ENST00000507524 1000 ntBASIC6□□□□□ -1.45
CHMP4CQ96CF2 AC010285.3-201ENST00000511668 676 ntBASIC6□□□□□ -1.45
CHMP4CQ96CF2 AC112673.1-201ENST00000513168 575 ntBASIC6□□□□□ -1.45
CHMP4CQ96CF2 RPL23AP53-201ENST00000521854 457 ntBASIC6□□□□□ -1.45
CHMP4CQ96CF2 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC6□□□□□ -1.45
CHMP4CQ96CF2 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC6□□□□□ -1.45
CHMP4CQ96CF2 MTND4P33-201ENST00000556706 766 ntBASIC6□□□□□ -1.45
CHMP4CQ96CF2 AL445423.1-201ENST00000609941 536 ntBASIC6□□□□□ -1.45
CHMP4CQ96CF2 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
CHMP4CQ96CF2 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC6□□□□□ -1.45
CHMP4CQ96CF2 AL353662.3-201ENST00000625131 237 ntBASIC6□□□□□ -1.45
CHMP4CQ96CF2 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC6□□□□□ -1.45
CHMP4CQ96CF2 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC6□□□□□ -1.45
CHMP4CQ96CF2 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC6□□□□□ -1.45
CHMP4CQ96CF2 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC6□□□□□ -1.45
CHMP4CQ96CF2 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC6□□□□□ -1.45
CHMP4CQ96CF2 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC6□□□□□ -1.45
CHMP4CQ96CF2 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
CHMP4CQ96CF2 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC6□□□□□ -1.45
CHMP4CQ96CF2 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CHMP4CQ96CF2 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CHMP4CQ96CF2 CASC19-204ENST00000641001 2055 ntBASIC6□□□□□ -1.45
CHMP4CQ96CF2 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC6□□□□□ -1.45
CHMP4CQ96CF2 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC6□□□□□ -1.45
CHMP4CQ96CF2 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CHMP4CQ96CF2 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CHMP4CQ96CF2 AC005332.5-201ENST00000591222 2919 ntBASIC5.99□□□□□ -1.45
CHMP4CQ96CF2 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CHMP4CQ96CF2 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
CHMP4CQ96CF2 Z95327.2-201ENST00000414579 1873 ntBASIC5.99□□□□□ -1.45
CHMP4CQ96CF2 AC005261.4-201ENST00000600047 1385 ntBASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms