Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 REXO2-218ENST00000544827 880 ntTSL 3 BASIC5.17□□□□□ -1.58
ATG4AQ8WYN0 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC5.17□□□□□ -1.58
ATG4AQ8WYN0 CYCSP40-201ENST00000575927 294 ntBASIC5.17□□□□□ -1.58
ATG4AQ8WYN0 MIR3912-201ENST00000577566 105 ntBASIC5.17□□□□□ -1.58
ATG4AQ8WYN0 MIR4666A-201ENST00000580160 79 ntBASIC5.17□□□□□ -1.58
ATG4AQ8WYN0 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.17□□□□□ -1.58
ATG4AQ8WYN0 AC022069.1-201ENST00000582910 658 ntBASIC5.17□□□□□ -1.58
ATG4AQ8WYN0 AC105129.3-201ENST00000605455 485 ntBASIC5.17□□□□□ -1.58
ATG4AQ8WYN0 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
ATG4AQ8WYN0 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC5.17□□□□□ -1.58
ATG4AQ8WYN0 AP002505.2-201ENST00000623585 696 ntBASIC5.17□□□□□ -1.58
ATG4AQ8WYN0 AC021106.3-201ENST00000623925 531 ntBASIC5.17□□□□□ -1.58
ATG4AQ8WYN0 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.17□□□□□ -1.58
ATG4AQ8WYN0 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
ATG4AQ8WYN0 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
ATG4AQ8WYN0 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
ATG4AQ8WYN0 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.17□□□□□ -1.58
ATG4AQ8WYN0 AL603750.1-201ENST00000624216 1717 ntBASIC5.17□□□□□ -1.58
ATG4AQ8WYN0 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.17□□□□□ -1.58
ATG4AQ8WYN0 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.17□□□□□ -1.58
ATG4AQ8WYN0 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.17□□□□□ -1.58
ATG4AQ8WYN0 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.16□□□□□ -1.58
ATG4AQ8WYN0 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
ATG4AQ8WYN0 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
ATG4AQ8WYN0 SCARNA15-201ENST00000607520 4325 ntBASIC5.16□□□□□ -1.58
ATG4AQ8WYN0 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
ATG4AQ8WYN0 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.16□□□□□ -1.58
ATG4AQ8WYN0 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.16□□□□□ -1.58
ATG4AQ8WYN0 AC093311.1-201ENST00000506586 2021 ntBASIC5.16□□□□□ -1.58
ATG4AQ8WYN0 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
ATG4AQ8WYN0 AC009643.2-201ENST00000603543 1448 ntBASIC5.16□□□□□ -1.58
ATG4AQ8WYN0 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
ATG4AQ8WYN0 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
ATG4AQ8WYN0 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
ATG4AQ8WYN0 AMELX-201ENST00000348912 737 ntTSL 5 BASIC5.16□□□□□ -1.58
ATG4AQ8WYN0 SNORA73.1-201ENST00000363107 205 ntBASIC5.16□□□□□ -1.58
ATG4AQ8WYN0 RNU6-560P-201ENST00000364007 108 ntBASIC5.16□□□□□ -1.58
ATG4AQ8WYN0 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
ATG4AQ8WYN0 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
ATG4AQ8WYN0 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
ATG4AQ8WYN0 AC093719.1-202ENST00000392735 373 ntBASIC5.16□□□□□ -1.58
ATG4AQ8WYN0 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
ATG4AQ8WYN0 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC5.16□□□□□ -1.58
ATG4AQ8WYN0 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC5.16□□□□□ -1.58
ATG4AQ8WYN0 RN7SKP222-201ENST00000410651 315 ntBASIC5.16□□□□□ -1.58
ATG4AQ8WYN0 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.16□□□□□ -1.58
ATG4AQ8WYN0 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC5.16□□□□□ -1.58
ATG4AQ8WYN0 RPL36AP10-201ENST00000421785 322 ntBASIC5.16□□□□□ -1.58
ATG4AQ8WYN0 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.16□□□□□ -1.58
ATG4AQ8WYN0 AL593851.1-201ENST00000426171 157 ntBASIC5.16□□□□□ -1.58
ATG4AQ8WYN0 RPP40P1-201ENST00000426762 456 ntBASIC5.16□□□□□ -1.58
ATG4AQ8WYN0 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
ATG4AQ8WYN0 AP001324.1-201ENST00000428553 399 ntBASIC5.16□□□□□ -1.58
ATG4AQ8WYN0 MTCO1P3-201ENST00000429327 192 ntBASIC5.16□□□□□ -1.58
ATG4AQ8WYN0 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC5.16□□□□□ -1.58
ATG4AQ8WYN0 YWHAZP7-201ENST00000436906 631 ntBASIC5.16□□□□□ -1.58
ATG4AQ8WYN0 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC5.16□□□□□ -1.58
ATG4AQ8WYN0 UBE2D3P4-201ENST00000441973 436 ntBASIC5.16□□□□□ -1.58
ATG4AQ8WYN0 AC073648.4-201ENST00000442655 781 ntBASIC5.16□□□□□ -1.58
ATG4AQ8WYN0 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC5.16□□□□□ -1.58
ATG4AQ8WYN0 IGHV5-78-201ENST00000450948 295 ntBASIC5.16□□□□□ -1.58
ATG4AQ8WYN0 SETP20-201ENST00000457046 852 ntBASIC5.16□□□□□ -1.58
ATG4AQ8WYN0 GYG1P1-201ENST00000460864 698 ntBASIC5.16□□□□□ -1.58
ATG4AQ8WYN0 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.16□□□□□ -1.58
ATG4AQ8WYN0 AC037198.2-201ENST00000478845 733 ntBASIC5.16□□□□□ -1.58
ATG4AQ8WYN0 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC5.16□□□□□ -1.58
ATG4AQ8WYN0 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC5.16□□□□□ -1.58
ATG4AQ8WYN0 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.16□□□□□ -1.58
ATG4AQ8WYN0 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
ATG4AQ8WYN0 AC092747.2-201ENST00000545069 983 ntBASIC5.16□□□□□ -1.58
ATG4AQ8WYN0 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC5.16□□□□□ -1.58
ATG4AQ8WYN0 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC5.16□□□□□ -1.58
ATG4AQ8WYN0 ELOCP32-201ENST00000548625 324 ntBASIC5.16□□□□□ -1.58
ATG4AQ8WYN0 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.16□□□□□ -1.58
ATG4AQ8WYN0 OR11J2P-201ENST00000555298 907 ntBASIC5.16□□□□□ -1.58
ATG4AQ8WYN0 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC5.16□□□□□ -1.58
ATG4AQ8WYN0 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC5.16□□□□□ -1.58
ATG4AQ8WYN0 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.16□□□□□ -1.58
ATG4AQ8WYN0 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC5.16□□□□□ -1.58
ATG4AQ8WYN0 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.16□□□□□ -1.58
ATG4AQ8WYN0 RN7SL435P-201ENST00000584418 282 ntBASIC5.16□□□□□ -1.58
ATG4AQ8WYN0 AL031281.1-201ENST00000604049 488 ntBASIC5.16□□□□□ -1.58
ATG4AQ8WYN0 AC124312.4-201ENST00000605533 310 ntBASIC5.16□□□□□ -1.58
ATG4AQ8WYN0 AC090525.3-201ENST00000605601 189 ntBASIC5.16□□□□□ -1.58
ATG4AQ8WYN0 AP005137.2-201ENST00000609238 400 ntBASIC5.16□□□□□ -1.58
ATG4AQ8WYN0 AC022509.4-201ENST00000621404 572 ntBASIC5.16□□□□□ -1.58
ATG4AQ8WYN0 AC092608.3-201ENST00000625017 386 ntBASIC5.16□□□□□ -1.58
ATG4AQ8WYN0 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC5.16□□□□□ -1.58
ATG4AQ8WYN0 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.16□□□□□ -1.58
ATG4AQ8WYN0 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.16□□□□□ -1.58
ATG4AQ8WYN0 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
ATG4AQ8WYN0 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.16□□□□□ -1.58
ATG4AQ8WYN0 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
ATG4AQ8WYN0 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.16□□□□□ -1.58
ATG4AQ8WYN0 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.16□□□□□ -1.58
ATG4AQ8WYN0 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
ATG4AQ8WYN0 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
ATG4AQ8WYN0 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
ATG4AQ8WYN0 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
ATG4AQ8WYN0 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms