Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SNED1Q8TER0 MIR1911-201ENST00000410783 80 ntBASIC5.06□□□□□ -1.6
SNED1Q8TER0 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC5.06□□□□□ -1.6
SNED1Q8TER0 SYF2P2-201ENST00000417620 583 ntBASIC5.06□□□□□ -1.6
SNED1Q8TER0 EIF1P3-201ENST00000423841 334 ntBASIC5.06□□□□□ -1.6
SNED1Q8TER0 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC5.06□□□□□ -1.6
SNED1Q8TER0 HSFY7P-201ENST00000432672 318 ntBASIC5.06□□□□□ -1.6
SNED1Q8TER0 RSL24D1P8-201ENST00000434442 492 ntBASIC5.06□□□□□ -1.6
SNED1Q8TER0 HSFY8P-201ENST00000437934 318 ntBASIC5.06□□□□□ -1.6
SNED1Q8TER0 AP000949.1-201ENST00000438328 629 ntBASIC5.06□□□□□ -1.6
SNED1Q8TER0 RPL23AP46-201ENST00000438548 490 ntBASIC5.06□□□□□ -1.6
SNED1Q8TER0 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC5.06□□□□□ -1.6
SNED1Q8TER0 HSFY5P-201ENST00000453726 309 ntBASIC5.06□□□□□ -1.6
SNED1Q8TER0 RPS4XP15-201ENST00000489210 795 ntBASIC5.06□□□□□ -1.6
SNED1Q8TER0 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC5.06□□□□□ -1.6
SNED1Q8TER0 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC5.06□□□□□ -1.6
SNED1Q8TER0 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC5.06□□□□□ -1.6
SNED1Q8TER0 AC126365.2-201ENST00000580630 379 ntBASIC5.06□□□□□ -1.6
SNED1Q8TER0 MIR5684-201ENST00000585074 65 ntBASIC5.06□□□□□ -1.6
SNED1Q8TER0 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC5.06□□□□□ -1.6
SNED1Q8TER0 AC114878.2-201ENST00000604863 1251 ntBASIC5.06□□□□□ -1.6
SNED1Q8TER0 AL592436.1-201ENST00000605135 558 ntBASIC5.06□□□□□ -1.6
SNED1Q8TER0 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.06□□□□□ -1.6
SNED1Q8TER0 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.06□□□□□ -1.6
SNED1Q8TER0 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SNED1Q8TER0 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SNED1Q8TER0 AC140113.4-201ENST00000622087 222 ntBASIC5.06□□□□□ -1.6
SNED1Q8TER0 AC091953.5-201ENST00000622919 233 ntBASIC5.06□□□□□ -1.6
SNED1Q8TER0 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC5.06□□□□□ -1.6
SNED1Q8TER0 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC5.06□□□□□ -1.6
SNED1Q8TER0 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
SNED1Q8TER0 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
SNED1Q8TER0 AC233968.1-201ENST00000611212 1300 ntBASIC5.06□□□□□ -1.6
SNED1Q8TER0 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
SNED1Q8TER0 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
SNED1Q8TER0 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
SNED1Q8TER0 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SNED1Q8TER0 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SNED1Q8TER0 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SNED1Q8TER0 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SNED1Q8TER0 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SNED1Q8TER0 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
SNED1Q8TER0 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SNED1Q8TER0 MTCO1P54-201ENST00000430139 712 ntBASIC5.06□□□□□ -1.6
SNED1Q8TER0 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC5.06□□□□□ -1.6
SNED1Q8TER0 AC006011.1-201ENST00000442758 349 ntBASIC5.06□□□□□ -1.6
SNED1Q8TER0 RPS27AP15-201ENST00000447672 466 ntBASIC5.06□□□□□ -1.6
SNED1Q8TER0 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC5.06□□□□□ -1.6
SNED1Q8TER0 RPS20P21-201ENST00000466859 343 ntBASIC5.06□□□□□ -1.6
SNED1Q8TER0 GAPDHP36-201ENST00000480688 918 ntBASIC5.06□□□□□ -1.6
SNED1Q8TER0 MORF4L2P1-201ENST00000503761 858 ntBASIC5.06□□□□□ -1.6
SNED1Q8TER0 AC090151.1-201ENST00000520784 730 ntBASIC5.06□□□□□ -1.6
SNED1Q8TER0 CYCSP28-201ENST00000534284 321 ntBASIC5.06□□□□□ -1.6
SNED1Q8TER0 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC5.06□□□□□ -1.6
SNED1Q8TER0 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC5.06□□□□□ -1.6
SNED1Q8TER0 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC5.06□□□□□ -1.6
SNED1Q8TER0 AL158211.1-201ENST00000566763 763 ntBASIC5.06□□□□□ -1.6
SNED1Q8TER0 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC5.06□□□□□ -1.6
SNED1Q8TER0 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC5.06□□□□□ -1.6
SNED1Q8TER0 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC5.06□□□□□ -1.6
SNED1Q8TER0 AC090312.1-201ENST00000580637 348 ntBASIC5.06□□□□□ -1.6
SNED1Q8TER0 PACRG-211ENST00000621363 360 ntTSL 5 BASIC5.06□□□□□ -1.6
SNED1Q8TER0 FP236240.3-201ENST00000623061 327 ntBASIC5.06□□□□□ -1.6
SNED1Q8TER0 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
SNED1Q8TER0 AC245100.2-201ENST00000454544 1679 ntBASIC5.05□□□□□ -1.6
SNED1Q8TER0 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SNED1Q8TER0 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC5.05□□□□□ -1.6
SNED1Q8TER0 AC006042.3-201ENST00000454684 1469 ntBASIC5.05□□□□□ -1.6
SNED1Q8TER0 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5.05□□□□□ -1.6
SNED1Q8TER0 AL121839.2-201ENST00000565058 6943 ntBASIC5.05□□□□□ -1.6
SNED1Q8TER0 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC5.05□□□□□ -1.6
SNED1Q8TER0 RNU2-72P-201ENST00000411175 163 ntBASIC5.05□□□□□ -1.6
SNED1Q8TER0 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC5.05□□□□□ -1.6
SNED1Q8TER0 AC091390.3-201ENST00000426478 338 ntBASIC5.05□□□□□ -1.6
SNED1Q8TER0 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC5.05□□□□□ -1.6
SNED1Q8TER0 FTLP19-201ENST00000433300 394 ntBASIC5.05□□□□□ -1.6
SNED1Q8TER0 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SNED1Q8TER0 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC5.05□□□□□ -1.6
SNED1Q8TER0 GXYLT1P1-201ENST00000446657 490 ntBASIC5.05□□□□□ -1.6
SNED1Q8TER0 RPL38P1-201ENST00000460914 211 ntBASIC5.05□□□□□ -1.6
SNED1Q8TER0 AC006499.5-201ENST00000505037 514 ntBASIC5.05□□□□□ -1.6
SNED1Q8TER0 PAICSP4-201ENST00000517543 1253 ntBASIC5.05□□□□□ -1.6
SNED1Q8TER0 OSBPL9P2-201ENST00000526582 1228 ntBASIC5.05□□□□□ -1.6
SNED1Q8TER0 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC5.05□□□□□ -1.6
SNED1Q8TER0 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC5.05□□□□□ -1.6
SNED1Q8TER0 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC5.05□□□□□ -1.6
SNED1Q8TER0 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC5.05□□□□□ -1.6
SNED1Q8TER0 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC5.05□□□□□ -1.6
SNED1Q8TER0 AC011458.1-201ENST00000604034 617 ntBASIC5.05□□□□□ -1.6
SNED1Q8TER0 AC016911.1-201ENST00000613297 452 ntBASIC5.05□□□□□ -1.6
SNED1Q8TER0 AC023510.2-201ENST00000622162 746 ntBASIC5.05□□□□□ -1.6
SNED1Q8TER0 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC5.05□□□□□ -1.6
SNED1Q8TER0 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
SNED1Q8TER0 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SNED1Q8TER0 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SNED1Q8TER0 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
SNED1Q8TER0 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
SNED1Q8TER0 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SNED1Q8TER0 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.04□□□□□ -1.6
SNED1Q8TER0 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms