Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC5.19□□□□□ -1.58
KRT78Q8N1N4 MTND2P26-201ENST00000528255 1029 ntBASIC5.19□□□□□ -1.58
KRT78Q8N1N4 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
KRT78Q8N1N4 HIGD1AP17-201ENST00000554576 276 ntBASIC5.19□□□□□ -1.58
KRT78Q8N1N4 DUXAP1-201ENST00000556632 463 ntBASIC5.19□□□□□ -1.58
KRT78Q8N1N4 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC5.19□□□□□ -1.58
KRT78Q8N1N4 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC5.19□□□□□ -1.58
KRT78Q8N1N4 OR4K7P-201ENST00000580232 945 ntBASIC5.19□□□□□ -1.58
KRT78Q8N1N4 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC5.19□□□□□ -1.58
KRT78Q8N1N4 AC108738.1-201ENST00000603703 237 ntBASIC5.19□□□□□ -1.58
KRT78Q8N1N4 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
KRT78Q8N1N4 AC244107.2-201ENST00000611773 76 ntBASIC5.19□□□□□ -1.58
KRT78Q8N1N4 MIR8080-201ENST00000622224 89 ntBASIC5.19□□□□□ -1.58
KRT78Q8N1N4 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC5.19□□□□□ -1.58
KRT78Q8N1N4 AC026422.1-201ENST00000623961 452 ntBASIC5.19□□□□□ -1.58
KRT78Q8N1N4 AC139792.2-201ENST00000624218 587 ntBASIC5.19□□□□□ -1.58
KRT78Q8N1N4 AP003399.1-201ENST00000637534 361 ntBASIC5.19□□□□□ -1.58
KRT78Q8N1N4 AC074101.1-201ENST00000637861 241 ntBASIC5.19□□□□□ -1.58
KRT78Q8N1N4 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
KRT78Q8N1N4 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.19□□□□□ -1.58
KRT78Q8N1N4 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
KRT78Q8N1N4 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
KRT78Q8N1N4 AL031119.1-201ENST00000404707 1879 ntBASIC5.19□□□□□ -1.58
KRT78Q8N1N4 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
KRT78Q8N1N4 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.19□□□□□ -1.58
KRT78Q8N1N4 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
KRT78Q8N1N4 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.19□□□□□ -1.58
KRT78Q8N1N4 AC107982.1-201ENST00000507171 1300 ntBASIC5.19□□□□□ -1.58
KRT78Q8N1N4 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
KRT78Q8N1N4 MAPK10-328ENST00000641553 4009 ntBASIC5.19□□□□□ -1.58
KRT78Q8N1N4 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.18□□□□□ -1.58
KRT78Q8N1N4 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC5.18□□□□□ -1.58
KRT78Q8N1N4 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
KRT78Q8N1N4 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
KRT78Q8N1N4 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
KRT78Q8N1N4 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
KRT78Q8N1N4 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
KRT78Q8N1N4 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
KRT78Q8N1N4 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.18□□□□□ -1.58
KRT78Q8N1N4 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC5.18□□□□□ -1.58
KRT78Q8N1N4 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
KRT78Q8N1N4 RNU1-85P-201ENST00000364127 164 ntBASIC5.18□□□□□ -1.58
KRT78Q8N1N4 SNORA48.4-201ENST00000391089 134 ntBASIC5.18□□□□□ -1.58
KRT78Q8N1N4 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC5.18□□□□□ -1.58
KRT78Q8N1N4 FCF1P2-201ENST00000415284 583 ntBASIC5.18□□□□□ -1.58
KRT78Q8N1N4 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC5.18□□□□□ -1.58
KRT78Q8N1N4 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC5.18□□□□□ -1.58
KRT78Q8N1N4 RPP40P1-201ENST00000426762 456 ntBASIC5.18□□□□□ -1.58
KRT78Q8N1N4 RPL7AP49-201ENST00000429522 581 ntBASIC5.18□□□□□ -1.58
KRT78Q8N1N4 AL591438.1-201ENST00000433508 581 ntBASIC5.18□□□□□ -1.58
KRT78Q8N1N4 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
KRT78Q8N1N4 AC090018.1-201ENST00000434369 367 ntBASIC5.18□□□□□ -1.58
KRT78Q8N1N4 YWHAZP8-201ENST00000436935 731 ntBASIC5.18□□□□□ -1.58
KRT78Q8N1N4 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.18□□□□□ -1.58
KRT78Q8N1N4 MTCYBP34-201ENST00000439552 670 ntBASIC5.18□□□□□ -1.58
KRT78Q8N1N4 RPL5P25-201ENST00000441148 775 ntBASIC5.18□□□□□ -1.58
KRT78Q8N1N4 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.18□□□□□ -1.58
KRT78Q8N1N4 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC5.18□□□□□ -1.58
KRT78Q8N1N4 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC5.18□□□□□ -1.58
KRT78Q8N1N4 CBX1P2-201ENST00000453841 458 ntBASIC5.18□□□□□ -1.58
KRT78Q8N1N4 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5.18□□□□□ -1.58
KRT78Q8N1N4 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC5.18□□□□□ -1.58
KRT78Q8N1N4 RPL7P51-201ENST00000490532 749 ntBASIC5.18□□□□□ -1.58
KRT78Q8N1N4 RN7SL447P-201ENST00000494711 245 ntBASIC5.18□□□□□ -1.58
KRT78Q8N1N4 IGBP1P4-201ENST00000503202 879 ntBASIC5.18□□□□□ -1.58
KRT78Q8N1N4 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC5.18□□□□□ -1.58
KRT78Q8N1N4 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.18□□□□□ -1.58
KRT78Q8N1N4 AC079395.1-201ENST00000510981 262 ntBASIC5.18□□□□□ -1.58
KRT78Q8N1N4 AC010587.2-201ENST00000511727 448 ntBASIC5.18□□□□□ -1.58
KRT78Q8N1N4 MTCO3P28-201ENST00000513351 515 ntBASIC5.18□□□□□ -1.58
KRT78Q8N1N4 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.18□□□□□ -1.58
KRT78Q8N1N4 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC5.18□□□□□ -1.58
KRT78Q8N1N4 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC5.18□□□□□ -1.58
KRT78Q8N1N4 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC5.18□□□□□ -1.58
KRT78Q8N1N4 AC107918.3-201ENST00000533272 382 ntBASIC5.18□□□□□ -1.58
KRT78Q8N1N4 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC5.18□□□□□ -1.58
KRT78Q8N1N4 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC5.18□□□□□ -1.58
KRT78Q8N1N4 AC138915.2-201ENST00000569776 97 ntBASIC5.18□□□□□ -1.58
KRT78Q8N1N4 AC074051.3-201ENST00000570238 358 ntBASIC5.18□□□□□ -1.58
KRT78Q8N1N4 MIR4716-201ENST00000579628 84 ntBASIC5.18□□□□□ -1.58
KRT78Q8N1N4 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
KRT78Q8N1N4 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
KRT78Q8N1N4 AL353778.1-201ENST00000603149 408 ntBASIC5.18□□□□□ -1.58
KRT78Q8N1N4 AL133507.1-201ENST00000605269 557 ntBASIC5.18□□□□□ -1.58
KRT78Q8N1N4 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC5.18□□□□□ -1.58
KRT78Q8N1N4 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC5.18□□□□□ -1.58
KRT78Q8N1N4 AC000068.2-201ENST00000608816 460 ntBASIC5.18□□□□□ -1.58
KRT78Q8N1N4 AC090116.1-201ENST00000615679 446 ntBASIC5.18□□□□□ -1.58
KRT78Q8N1N4 AP003400.3-201ENST00000624904 346 ntBASIC5.18□□□□□ -1.58
KRT78Q8N1N4 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
KRT78Q8N1N4 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
KRT78Q8N1N4 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
KRT78Q8N1N4 AC005332.5-201ENST00000591222 2919 ntBASIC5.18□□□□□ -1.58
KRT78Q8N1N4 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.18□□□□□ -1.58
KRT78Q8N1N4 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
KRT78Q8N1N4 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
KRT78Q8N1N4 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.18□□□□□ -1.58
KRT78Q8N1N4 AC120338.1-201ENST00000625074 1541 ntBASIC5.18□□□□□ -1.58
KRT78Q8N1N4 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
KRT78Q8N1N4 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms