Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
ATG4DQ86TL0 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
ATG4DQ86TL0 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
ATG4DQ86TL0 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
ATG4DQ86TL0 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
ATG4DQ86TL0 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC5.69□□□□□ -1.5
ATG4DQ86TL0 RNA5SP485-201ENST00000365053 119 ntBASIC5.69□□□□□ -1.5
ATG4DQ86TL0 Y_RNA.315-201ENST00000365117 102 ntBASIC5.69□□□□□ -1.5
ATG4DQ86TL0 Y_RNA.384-201ENST00000383909 102 ntBASIC5.69□□□□□ -1.5
ATG4DQ86TL0 RNU6-533P-201ENST00000384144 107 ntBASIC5.69□□□□□ -1.5
ATG4DQ86TL0 RNU6-43P-201ENST00000384302 107 ntBASIC5.69□□□□□ -1.5
ATG4DQ86TL0 Y_RNA.474-201ENST00000384341 102 ntBASIC5.69□□□□□ -1.5
ATG4DQ86TL0 RNU6-809P-201ENST00000384461 107 ntBASIC5.69□□□□□ -1.5
ATG4DQ86TL0 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
ATG4DQ86TL0 AL360271.1-201ENST00000395679 510 ntBASIC5.69□□□□□ -1.5
ATG4DQ86TL0 RNU2-47P-201ENST00000410649 186 ntBASIC5.69□□□□□ -1.5
ATG4DQ86TL0 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
ATG4DQ86TL0 AC245054.2-201ENST00000415639 319 ntBASIC5.69□□□□□ -1.5
ATG4DQ86TL0 AC007562.1-201ENST00000421819 517 ntBASIC5.69□□□□□ -1.5
ATG4DQ86TL0 RIMKLBP2-201ENST00000424737 654 ntBASIC5.69□□□□□ -1.5
ATG4DQ86TL0 RPS7P14-201ENST00000426405 583 ntBASIC5.69□□□□□ -1.5
ATG4DQ86TL0 BLOC1S2P1-201ENST00000428431 301 ntBASIC5.69□□□□□ -1.5
ATG4DQ86TL0 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC5.69□□□□□ -1.5
ATG4DQ86TL0 MRPS21P3-201ENST00000436696 262 ntBASIC5.69□□□□□ -1.5
ATG4DQ86TL0 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC5.69□□□□□ -1.5
ATG4DQ86TL0 AC079922.1-201ENST00000443291 359 ntBASIC5.69□□□□□ -1.5
ATG4DQ86TL0 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC5.69□□□□□ -1.5
ATG4DQ86TL0 DNAJC19P8-201ENST00000452887 259 ntBASIC5.69□□□□□ -1.5
ATG4DQ86TL0 NDUFA5P7-201ENST00000452914 242 ntBASIC5.69□□□□□ -1.5
ATG4DQ86TL0 DNAJB5P1-201ENST00000454004 806 ntBASIC5.69□□□□□ -1.5
ATG4DQ86TL0 SNORD19B-201ENST00000459623 84 ntBASIC5.69□□□□□ -1.5
ATG4DQ86TL0 RN7SL326P-201ENST00000477493 296 ntBASIC5.69□□□□□ -1.5
ATG4DQ86TL0 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
ATG4DQ86TL0 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC5.69□□□□□ -1.5
ATG4DQ86TL0 RNU6-1170P-201ENST00000515974 106 ntBASIC5.69□□□□□ -1.5
ATG4DQ86TL0 RNA5SP441-201ENST00000516809 88 ntBASIC5.69□□□□□ -1.5
ATG4DQ86TL0 ODF1-202ENST00000518835 368 ntTSL 3 BASIC5.69□□□□□ -1.5
ATG4DQ86TL0 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC5.69□□□□□ -1.5
ATG4DQ86TL0 CYCSP25-201ENST00000525280 316 ntBASIC5.69□□□□□ -1.5
ATG4DQ86TL0 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC5.69□□□□□ -1.5
ATG4DQ86TL0 OR5BN1P-201ENST00000532955 829 ntBASIC5.69□□□□□ -1.5
ATG4DQ86TL0 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC5.69□□□□□ -1.5
ATG4DQ86TL0 AL845331.3-202ENST00000562856 261 ntBASIC5.69□□□□□ -1.5
ATG4DQ86TL0 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
ATG4DQ86TL0 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC5.69□□□□□ -1.5
ATG4DQ86TL0 MIR3154-201ENST00000577829 84 ntBASIC5.69□□□□□ -1.5
ATG4DQ86TL0 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.69□□□□□ -1.5
ATG4DQ86TL0 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC5.69□□□□□ -1.5
ATG4DQ86TL0 MIR3149-201ENST00000584629 83 ntBASIC5.69□□□□□ -1.5
ATG4DQ86TL0 NPIPB1P-202ENST00000588786 828 ntBASIC5.69□□□□□ -1.5
ATG4DQ86TL0 AL669831.4-202ENST00000590817 238 ntBASIC5.69□□□□□ -1.5
ATG4DQ86TL0 AC068020.1-201ENST00000594215 661 ntBASIC5.69□□□□□ -1.5
ATG4DQ86TL0 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC5.69□□□□□ -1.5
ATG4DQ86TL0 AC130352.1-201ENST00000602979 661 ntBASIC5.69□□□□□ -1.5
ATG4DQ86TL0 AC090948.1-201ENST00000607464 549 ntBASIC5.69□□□□□ -1.5
ATG4DQ86TL0 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC5.69□□□□□ -1.5
ATG4DQ86TL0 MIR6721-201ENST00000617181 87 ntBASIC5.69□□□□□ -1.5
ATG4DQ86TL0 AC129778.1-202ENST00000623812 261 ntBASIC5.69□□□□□ -1.5
ATG4DQ86TL0 PISRT1-201ENST00000626175 531 ntBASIC5.69□□□□□ -1.5
ATG4DQ86TL0 AL591379.1-207ENST00000635982 261 ntBASIC5.69□□□□□ -1.5
ATG4DQ86TL0 AMYH02020865.1-205ENST00000636189 261 ntBASIC5.69□□□□□ -1.5
ATG4DQ86TL0 AC116667.2-201ENST00000641075 823 ntBASIC5.69□□□□□ -1.5
ATG4DQ86TL0 AP001541.1-201ENST00000623322 1904 ntBASIC5.69□□□□□ -1.5
ATG4DQ86TL0 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC5.69□□□□□ -1.5
ATG4DQ86TL0 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.69□□□□□ -1.5
ATG4DQ86TL0 OR5BR1P-201ENST00000524992 1330 ntBASIC5.69□□□□□ -1.5
ATG4DQ86TL0 HSPD1P8-201ENST00000400121 1658 ntBASIC5.69□□□□□ -1.5
ATG4DQ86TL0 AC021242.1-201ENST00000507315 2035 ntBASIC5.69□□□□□ -1.5
ATG4DQ86TL0 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC5.69□□□□□ -1.5
ATG4DQ86TL0 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC5.69□□□□□ -1.5
ATG4DQ86TL0 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
ATG4DQ86TL0 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC5.69□□□□□ -1.5
ATG4DQ86TL0 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.68□□□□□ -1.5
ATG4DQ86TL0 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
ATG4DQ86TL0 LARP1BP1-201ENST00000506036 1359 ntBASIC5.68□□□□□ -1.5
ATG4DQ86TL0 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
ATG4DQ86TL0 ANKRD26P2-201ENST00000445530 1710 ntBASIC5.68□□□□□ -1.5
ATG4DQ86TL0 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
ATG4DQ86TL0 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC5.68□□□□□ -1.5
ATG4DQ86TL0 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
ATG4DQ86TL0 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC5.68□□□□□ -1.5
ATG4DQ86TL0 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC5.68□□□□□ -1.5
ATG4DQ86TL0 TMCC1P1-201ENST00000518897 1980 ntBASIC5.68□□□□□ -1.5
ATG4DQ86TL0 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
ATG4DQ86TL0 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
ATG4DQ86TL0 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC5.68□□□□□ -1.5
ATG4DQ86TL0 U8.3-201ENST00000363321 132 ntBASIC5.68□□□□□ -1.5
ATG4DQ86TL0 Y_RNA.157-201ENST00000363638 102 ntBASIC5.68□□□□□ -1.5
ATG4DQ86TL0 RNU6-359P-201ENST00000365466 108 ntBASIC5.68□□□□□ -1.5
ATG4DQ86TL0 Y_RNA.481-201ENST00000384373 102 ntBASIC5.68□□□□□ -1.5
ATG4DQ86TL0 MIR217-201ENST00000384817 110 ntBASIC5.68□□□□□ -1.5
ATG4DQ86TL0 MIR568-201ENST00000385036 95 ntBASIC5.68□□□□□ -1.5
ATG4DQ86TL0 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
ATG4DQ86TL0 RNU6-1300P-201ENST00000391046 108 ntBASIC5.68□□□□□ -1.5
ATG4DQ86TL0 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
ATG4DQ86TL0 AL589647.1-201ENST00000402485 466 ntBASIC5.68□□□□□ -1.5
ATG4DQ86TL0 TXNP7-201ENST00000406296 293 ntBASIC5.68□□□□□ -1.5
ATG4DQ86TL0 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.68□□□□□ -1.5
ATG4DQ86TL0 RPL5P18-201ENST00000406671 891 ntBASIC5.68□□□□□ -1.5
ATG4DQ86TL0 RN7SKP140-201ENST00000411196 284 ntBASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms