Protein–RNA interactions for Protein: Q3LFD5

USP41, Putative ubiquitin carboxyl-terminal hydrolase 41, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP41Q3LFD5 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.99□□□□□ -1.61
USP41Q3LFD5 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
USP41Q3LFD5 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.99□□□□□ -1.61
USP41Q3LFD5 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
USP41Q3LFD5 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.99□□□□□ -1.61
USP41Q3LFD5 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
USP41Q3LFD5 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
USP41Q3LFD5 HSPD1P14-201ENST00000432666 1618 ntBASIC4.99□□□□□ -1.61
USP41Q3LFD5 AP000568.1-201ENST00000282964 442 ntBASIC4.99□□□□□ -1.61
USP41Q3LFD5 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
USP41Q3LFD5 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
USP41Q3LFD5 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
USP41Q3LFD5 MIR320B1-201ENST00000390209 79 ntBASIC4.99□□□□□ -1.61
USP41Q3LFD5 AL049693.1-201ENST00000402760 611 ntBASIC4.99□□□□□ -1.61
USP41Q3LFD5 RN7SKP222-201ENST00000410651 315 ntBASIC4.99□□□□□ -1.61
USP41Q3LFD5 RNA5SP498-201ENST00000411342 120 ntBASIC4.99□□□□□ -1.61
USP41Q3LFD5 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.99□□□□□ -1.61
USP41Q3LFD5 AL592293.2-201ENST00000422292 996 ntBASIC4.99□□□□□ -1.61
USP41Q3LFD5 CHIAP3-201ENST00000423668 1133 ntBASIC4.99□□□□□ -1.61
USP41Q3LFD5 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC4.99□□□□□ -1.61
USP41Q3LFD5 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.99□□□□□ -1.61
USP41Q3LFD5 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC4.99□□□□□ -1.61
USP41Q3LFD5 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
USP41Q3LFD5 AC108463.1-201ENST00000450258 347 ntBASIC4.99□□□□□ -1.61
USP41Q3LFD5 AL356981.1-201ENST00000454879 684 ntBASIC4.99□□□□□ -1.61
USP41Q3LFD5 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC4.99□□□□□ -1.61
USP41Q3LFD5 AC090142.1-201ENST00000465776 462 ntBASIC4.99□□□□□ -1.61
USP41Q3LFD5 AC018635.1-201ENST00000468292 1030 ntBASIC4.99□□□□□ -1.61
USP41Q3LFD5 AC112206.1-201ENST00000468416 477 ntBASIC4.99□□□□□ -1.61
USP41Q3LFD5 AC104763.1-201ENST00000475274 360 ntBASIC4.99□□□□□ -1.61
USP41Q3LFD5 AC025164.1-201ENST00000496249 478 ntBASIC4.99□□□□□ -1.61
USP41Q3LFD5 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC4.99□□□□□ -1.61
USP41Q3LFD5 IGBP1P5-201ENST00000507524 1000 ntBASIC4.99□□□□□ -1.61
USP41Q3LFD5 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
USP41Q3LFD5 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
USP41Q3LFD5 NPM1P35-201ENST00000533043 868 ntBASIC4.99□□□□□ -1.61
USP41Q3LFD5 AP003717.3-201ENST00000544832 1180 ntBASIC4.99□□□□□ -1.61
USP41Q3LFD5 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC4.99□□□□□ -1.61
USP41Q3LFD5 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.99□□□□□ -1.61
USP41Q3LFD5 AC008782.1-201ENST00000603386 430 ntBASIC4.99□□□□□ -1.61
USP41Q3LFD5 AL121652.1-201ENST00000608851 448 ntBASIC4.99□□□□□ -1.61
USP41Q3LFD5 RNU6-1192P-201ENST00000612197 107 ntBASIC4.99□□□□□ -1.61
USP41Q3LFD5 AL133243.1-201ENST00000614487 366 ntBASIC4.99□□□□□ -1.61
USP41Q3LFD5 AC011472.4-201ENST00000615848 491 ntBASIC4.99□□□□□ -1.61
USP41Q3LFD5 RNU6-489P-201ENST00000618289 107 ntBASIC4.99□□□□□ -1.61
USP41Q3LFD5 AL035461.2-201ENST00000619201 524 ntBASIC4.99□□□□□ -1.61
USP41Q3LFD5 AP005019.3-201ENST00000620418 560 ntBASIC4.99□□□□□ -1.61
USP41Q3LFD5 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC4.99□□□□□ -1.61
USP41Q3LFD5 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
USP41Q3LFD5 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
USP41Q3LFD5 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.99□□□□□ -1.61
USP41Q3LFD5 AC010300.1-201ENST00000600671 5134 ntBASIC4.99□□□□□ -1.61
USP41Q3LFD5 AC108467.2-201ENST00000617640 1597 ntBASIC4.99□□□□□ -1.61
USP41Q3LFD5 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.99□□□□□ -1.61
USP41Q3LFD5 OR14L1P-202ENST00000641545 3009 ntBASIC4.99□□□□□ -1.61
USP41Q3LFD5 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.99□□□□□ -1.61
USP41Q3LFD5 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.99□□□□□ -1.61
USP41Q3LFD5 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.99□□□□□ -1.61
USP41Q3LFD5 AL645568.2-201ENST00000432815 1337 ntBASIC4.98□□□□□ -1.61
USP41Q3LFD5 AC093775.1-201ENST00000624154 1868 ntBASIC4.98□□□□□ -1.61
USP41Q3LFD5 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
USP41Q3LFD5 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
USP41Q3LFD5 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
USP41Q3LFD5 RNU6-207P-201ENST00000384137 107 ntBASIC4.98□□□□□ -1.61
USP41Q3LFD5 RN7SKP199-201ENST00000410325 305 ntBASIC4.98□□□□□ -1.61
USP41Q3LFD5 AC096533.1-201ENST00000411645 353 ntBASIC4.98□□□□□ -1.61
USP41Q3LFD5 OR51B3P-201ENST00000412287 913 ntBASIC4.98□□□□□ -1.61
USP41Q3LFD5 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC4.98□□□□□ -1.61
USP41Q3LFD5 EIF4A1P1-201ENST00000420241 934 ntBASIC4.98□□□□□ -1.61
USP41Q3LFD5 AL358176.3-201ENST00000420757 454 ntBASIC4.98□□□□□ -1.61
USP41Q3LFD5 MTCO1P52-201ENST00000433928 531 ntBASIC4.98□□□□□ -1.61
USP41Q3LFD5 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.98□□□□□ -1.61
USP41Q3LFD5 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.98□□□□□ -1.61
USP41Q3LFD5 MED6P1-201ENST00000439659 713 ntBASIC4.98□□□□□ -1.61
USP41Q3LFD5 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC4.98□□□□□ -1.61
USP41Q3LFD5 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC4.98□□□□□ -1.61
USP41Q3LFD5 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
USP41Q3LFD5 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
USP41Q3LFD5 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.98□□□□□ -1.61
USP41Q3LFD5 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.98□□□□□ -1.61
USP41Q3LFD5 AC104982.1-201ENST00000478775 574 ntBASIC4.98□□□□□ -1.61
USP41Q3LFD5 RPL7AP10-201ENST00000481016 791 ntBASIC4.98□□□□□ -1.61
USP41Q3LFD5 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC4.98□□□□□ -1.61
USP41Q3LFD5 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.98□□□□□ -1.61
USP41Q3LFD5 TOMM20P2-201ENST00000540082 421 ntBASIC4.98□□□□□ -1.61
USP41Q3LFD5 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.98□□□□□ -1.61
USP41Q3LFD5 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC4.98□□□□□ -1.61
USP41Q3LFD5 AL049830.4-201ENST00000555149 351 ntBASIC4.98□□□□□ -1.61
USP41Q3LFD5 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
USP41Q3LFD5 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.98□□□□□ -1.61
USP41Q3LFD5 AC096947.1-201ENST00000603233 470 ntBASIC4.98□□□□□ -1.61
USP41Q3LFD5 AC017076.1-201ENST00000607613 578 ntBASIC4.98□□□□□ -1.61
USP41Q3LFD5 MKKS-203ENST00000609375 882 ntTSL 2 BASIC4.98□□□□□ -1.61
USP41Q3LFD5 AL355816.2-201ENST00000610049 647 ntBASIC4.98□□□□□ -1.61
USP41Q3LFD5 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.98□□□□□ -1.61
USP41Q3LFD5 AC024023.1-201ENST00000624530 922 ntBASIC4.98□□□□□ -1.61
USP41Q3LFD5 MIR6830-201ENST00000636015 70 ntBASIC4.98□□□□□ -1.61
USP41Q3LFD5 AC083865.1-201ENST00000636634 831 ntBASIC4.98□□□□□ -1.61
USP41Q3LFD5 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.98□□□□□ -1.61
USP41Q3LFD5 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms