Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 AC044860.2-201ENST00000561005 179 ntBASIC4.46□□□□□ -1.7
SEC61A1P61619 AC005341.1-201ENST00000571086 708 ntBASIC4.46□□□□□ -1.7
SEC61A1P61619 AL354943.1-201ENST00000572103 781 ntBASIC4.46□□□□□ -1.7
SEC61A1P61619 MTND4LP24-201ENST00000572277 291 ntBASIC4.46□□□□□ -1.7
SEC61A1P61619 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.46□□□□□ -1.7
SEC61A1P61619 AP001269.3-201ENST00000588718 329 ntBASIC4.46□□□□□ -1.7
SEC61A1P61619 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.46□□□□□ -1.7
SEC61A1P61619 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.46□□□□□ -1.7
SEC61A1P61619 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC4.46□□□□□ -1.7
SEC61A1P61619 AC018638.7-201ENST00000605836 1114 ntBASIC4.46□□□□□ -1.7
SEC61A1P61619 AC211433.2-201ENST00000608433 387 ntBASIC4.46□□□□□ -1.7
SEC61A1P61619 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
SEC61A1P61619 AC139769.3-201ENST00000618383 175 ntBASIC4.46□□□□□ -1.7
SEC61A1P61619 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC4.46□□□□□ -1.7
SEC61A1P61619 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SEC61A1P61619 AL596275.2-204ENST00000641628 552 ntBASIC4.46□□□□□ -1.7
SEC61A1P61619 LINC01808-202ENST00000641680 1116 ntBASIC4.46□□□□□ -1.7
SEC61A1P61619 ZNF663P-202ENST00000641770 1131 ntBASIC4.46□□□□□ -1.7
SEC61A1P61619 AL596275.2-206ENST00000641957 626 ntBASIC4.46□□□□□ -1.7
SEC61A1P61619 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SEC61A1P61619 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
SEC61A1P61619 AC063976.2-201ENST00000425667 3556 ntBASIC4.46□□□□□ -1.7
SEC61A1P61619 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SEC61A1P61619 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
SEC61A1P61619 BX005019.1-201ENST00000561881 1810 ntBASIC4.46□□□□□ -1.7
SEC61A1P61619 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC4.46□□□□□ -1.7
SEC61A1P61619 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC4.45□□□□□ -1.7
SEC61A1P61619 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
SEC61A1P61619 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SEC61A1P61619 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.45□□□□□ -1.7
SEC61A1P61619 AC093311.1-201ENST00000506586 2021 ntBASIC4.45□□□□□ -1.7
SEC61A1P61619 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SEC61A1P61619 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SEC61A1P61619 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SEC61A1P61619 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SEC61A1P61619 RNU6-98P-201ENST00000384173 107 ntBASIC4.45□□□□□ -1.7
SEC61A1P61619 MIR105-2-201ENST00000385083 81 ntBASIC4.45□□□□□ -1.7
SEC61A1P61619 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
SEC61A1P61619 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
SEC61A1P61619 DUTP5-201ENST00000406790 469 ntBASIC4.45□□□□□ -1.7
SEC61A1P61619 MRM2-202ENST00000407040 582 ntTSL 3 BASIC4.45□□□□□ -1.7
SEC61A1P61619 HSFY4P-201ENST00000415994 1181 ntBASIC4.45□□□□□ -1.7
SEC61A1P61619 OR4K6P-201ENST00000416478 897 ntBASIC4.45□□□□□ -1.7
SEC61A1P61619 QRSL1P2-201ENST00000418582 964 ntBASIC4.45□□□□□ -1.7
SEC61A1P61619 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC4.45□□□□□ -1.7
SEC61A1P61619 ZDHHC20P2-201ENST00000424108 429 ntBASIC4.45□□□□□ -1.7
SEC61A1P61619 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC4.45□□□□□ -1.7
SEC61A1P61619 AL353093.1-201ENST00000441292 436 ntBASIC4.45□□□□□ -1.7
SEC61A1P61619 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC4.45□□□□□ -1.7
SEC61A1P61619 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC4.45□□□□□ -1.7
SEC61A1P61619 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC4.45□□□□□ -1.7
SEC61A1P61619 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC4.45□□□□□ -1.7
SEC61A1P61619 AL050341.1-201ENST00000447743 313 ntBASIC4.45□□□□□ -1.7
SEC61A1P61619 BX842559.2-201ENST00000451418 605 ntBASIC4.45□□□□□ -1.7
SEC61A1P61619 AL035407.2-201ENST00000454090 378 ntBASIC4.45□□□□□ -1.7
SEC61A1P61619 RPL7AP52-201ENST00000458096 790 ntBASIC4.45□□□□□ -1.7
SEC61A1P61619 RNU7-27P-201ENST00000459281 62 ntBASIC4.45□□□□□ -1.7
SEC61A1P61619 AC058823.1-201ENST00000485315 474 ntBASIC4.45□□□□□ -1.7
SEC61A1P61619 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.45□□□□□ -1.7
SEC61A1P61619 RN7SL808P-201ENST00000496066 299 ntBASIC4.45□□□□□ -1.7
SEC61A1P61619 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.45□□□□□ -1.7
SEC61A1P61619 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4.45□□□□□ -1.7
SEC61A1P61619 FGB-207ENST00000509493 1164 ntTSL 5 BASIC4.45□□□□□ -1.7
SEC61A1P61619 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC4.45□□□□□ -1.7
SEC61A1P61619 RNU6-1129P-201ENST00000515964 104 ntBASIC4.45□□□□□ -1.7
SEC61A1P61619 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC4.45□□□□□ -1.7
SEC61A1P61619 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.45□□□□□ -1.7
SEC61A1P61619 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC4.45□□□□□ -1.7
SEC61A1P61619 LYZ-203ENST00000549690 669 ntTSL 2 BASIC4.45□□□□□ -1.7
SEC61A1P61619 AC008015.1-201ENST00000555505 465 ntBASIC4.45□□□□□ -1.7
SEC61A1P61619 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC4.45□□□□□ -1.7
SEC61A1P61619 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC4.45□□□□□ -1.7
SEC61A1P61619 MIR3691-201ENST00000578066 90 ntBASIC4.45□□□□□ -1.7
SEC61A1P61619 VN1R83P-201ENST00000595685 445 ntBASIC4.45□□□□□ -1.7
SEC61A1P61619 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SEC61A1P61619 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.45□□□□□ -1.7
SEC61A1P61619 AC121247.2-201ENST00000604776 136 ntBASIC4.45□□□□□ -1.7
SEC61A1P61619 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SEC61A1P61619 AC018695.5-201ENST00000605872 315 ntBASIC4.45□□□□□ -1.7
SEC61A1P61619 AL583856.2-201ENST00000606298 543 ntBASIC4.45□□□□□ -1.7
SEC61A1P61619 AL445222.1-201ENST00000607259 628 ntBASIC4.45□□□□□ -1.7
SEC61A1P61619 AL353600.1-201ENST00000608148 251 ntBASIC4.45□□□□□ -1.7
SEC61A1P61619 SNORD91B-202ENST00000608459 222 ntBASIC4.45□□□□□ -1.7
SEC61A1P61619 FRG1HP-204ENST00000617940 757 ntBASIC4.45□□□□□ -1.7
SEC61A1P61619 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SEC61A1P61619 AC007342.8-201ENST00000623278 678 ntBASIC4.45□□□□□ -1.7
SEC61A1P61619 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
SEC61A1P61619 OR8B1P-202ENST00000641132 1178 ntBASIC4.45□□□□□ -1.7
SEC61A1P61619 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.45□□□□□ -1.7
SEC61A1P61619 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SEC61A1P61619 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
SEC61A1P61619 AC006210.2-201ENST00000367074 1545 ntBASIC4.45□□□□□ -1.7
SEC61A1P61619 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SEC61A1P61619 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.45□□□□□ -1.7
SEC61A1P61619 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
SEC61A1P61619 AC104446.1-201ENST00000613728 1321 ntBASIC4.45□□□□□ -1.7
SEC61A1P61619 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.44□□□□□ -1.7
SEC61A1P61619 SOCS5P3-201ENST00000425115 1576 ntBASIC4.44□□□□□ -1.7
SEC61A1P61619 RLIMP2-201ENST00000427891 1563 ntBASIC4.44□□□□□ -1.7
SEC61A1P61619 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms