Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC3.53□□□□□ -1.84
CCL1P22362 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CCL1P22362 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CCL1P22362 MIR365B-201ENST00000362317 111 ntBASIC3.53□□□□□ -1.84
CCL1P22362 RNA5SP366-201ENST00000365454 123 ntBASIC3.53□□□□□ -1.84
CCL1P22362 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC3.53□□□□□ -1.84
CCL1P22362 AL161909.1-201ENST00000397390 712 ntBASIC3.53□□□□□ -1.84
CCL1P22362 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CCL1P22362 RPS4XP9-201ENST00000405151 780 ntBASIC3.53□□□□□ -1.84
CCL1P22362 AL035696.2-201ENST00000407941 709 ntBASIC3.53□□□□□ -1.84
CCL1P22362 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC3.53□□□□□ -1.84
CCL1P22362 RPL12P34-201ENST00000424532 479 ntBASIC3.53□□□□□ -1.84
CCL1P22362 TRAPPC2P5-201ENST00000426293 308 ntBASIC3.53□□□□□ -1.84
CCL1P22362 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC3.53□□□□□ -1.84
CCL1P22362 RPL23AP4-201ENST00000427757 463 ntBASIC3.53□□□□□ -1.84
CCL1P22362 AL358472.1-201ENST00000431295 329 ntBASIC3.53□□□□□ -1.84
CCL1P22362 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC3.53□□□□□ -1.84
CCL1P22362 ACTR3P2-201ENST00000439585 1257 ntBASIC3.53□□□□□ -1.84
CCL1P22362 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC3.53□□□□□ -1.84
CCL1P22362 YWHAQP9-201ENST00000445891 512 ntBASIC3.53□□□□□ -1.84
CCL1P22362 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC3.53□□□□□ -1.84
CCL1P22362 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC3.53□□□□□ -1.84
CCL1P22362 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.53□□□□□ -1.84
CCL1P22362 AC041039.1-201ENST00000485656 536 ntBASIC3.53□□□□□ -1.84
CCL1P22362 AC093720.1-201ENST00000505681 714 ntBASIC3.53□□□□□ -1.84
CCL1P22362 AC113430.1-201ENST00000506872 718 ntBASIC3.53□□□□□ -1.84
CCL1P22362 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC3.53□□□□□ -1.84
CCL1P22362 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CCL1P22362 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC3.53□□□□□ -1.84
CCL1P22362 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC3.53□□□□□ -1.84
CCL1P22362 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC3.53□□□□□ -1.84
CCL1P22362 GNRHR2P1-201ENST00000555315 631 ntBASIC3.53□□□□□ -1.84
CCL1P22362 PSMB7P1-201ENST00000556349 514 ntBASIC3.53□□□□□ -1.84
CCL1P22362 AL360157.1-201ENST00000565962 87 ntBASIC3.53□□□□□ -1.84
CCL1P22362 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC3.53□□□□□ -1.84
CCL1P22362 MRPS35P3-201ENST00000603189 709 ntBASIC3.53□□□□□ -1.84
CCL1P22362 AL356218.2-201ENST00000605264 187 ntBASIC3.53□□□□□ -1.84
CCL1P22362 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC3.53□□□□□ -1.84
CCL1P22362 AC090246.1-201ENST00000616499 426 ntBASIC3.53□□□□□ -1.84
CCL1P22362 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC3.53□□□□□ -1.84
CCL1P22362 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
CCL1P22362 GHR-213ENST00000622294 4312 ntTSL 5 BASIC3.53□□□□□ -1.84
CCL1P22362 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
CCL1P22362 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
CCL1P22362 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
CCL1P22362 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.53□□□□□ -1.84
CCL1P22362 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC3.53□□□□□ -1.85
CCL1P22362 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CCL1P22362 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CCL1P22362 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CCL1P22362 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
CCL1P22362 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC3.52□□□□□ -1.85
CCL1P22362 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CCL1P22362 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CCL1P22362 SNORA60-201ENST00000362396 134 ntBASIC3.52□□□□□ -1.85
CCL1P22362 RNA5SP509-201ENST00000364577 119 ntBASIC3.52□□□□□ -1.85
CCL1P22362 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
CCL1P22362 CYB5AP4-201ENST00000396692 399 ntBASIC3.52□□□□□ -1.85
CCL1P22362 HSPD1P16-201ENST00000402302 394 ntBASIC3.52□□□□□ -1.85
CCL1P22362 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
CCL1P22362 RNU6-603P-201ENST00000411403 107 ntBASIC3.52□□□□□ -1.85
CCL1P22362 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC3.52□□□□□ -1.85
CCL1P22362 AC011933.1-201ENST00000413334 321 ntBASIC3.52□□□□□ -1.85
CCL1P22362 SMC4P1-201ENST00000414479 527 ntBASIC3.52□□□□□ -1.85
CCL1P22362 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC3.52□□□□□ -1.85
CCL1P22362 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.52□□□□□ -1.85
CCL1P22362 GAPDHP49-201ENST00000421421 961 ntBASIC3.52□□□□□ -1.85
CCL1P22362 BRWD1P3-201ENST00000428816 390 ntBASIC3.52□□□□□ -1.85
CCL1P22362 AC023141.6-201ENST00000429418 337 ntBASIC3.52□□□□□ -1.85
CCL1P22362 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC3.52□□□□□ -1.85
CCL1P22362 COX6B1P7-201ENST00000430845 235 ntBASIC3.52□□□□□ -1.85
CCL1P22362 AC096638.2-201ENST00000434965 711 ntBASIC3.52□□□□□ -1.85
CCL1P22362 AL356535.1-201ENST00000440335 398 ntBASIC3.52□□□□□ -1.85
CCL1P22362 ELOCP10-201ENST00000440624 327 ntBASIC3.52□□□□□ -1.85
CCL1P22362 AL162388.1-201ENST00000450912 352 ntBASIC3.52□□□□□ -1.85
CCL1P22362 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC3.52□□□□□ -1.85
CCL1P22362 AC116533.1-201ENST00000459748 321 ntBASIC3.52□□□□□ -1.85
CCL1P22362 RN7SL481P-201ENST00000477764 299 ntBASIC3.52□□□□□ -1.85
CCL1P22362 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC3.52□□□□□ -1.85
CCL1P22362 AC013356.1-201ENST00000489027 564 ntBASIC3.52□□□□□ -1.85
CCL1P22362 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC3.52□□□□□ -1.85
CCL1P22362 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.52□□□□□ -1.85
CCL1P22362 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.52□□□□□ -1.85
CCL1P22362 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC3.52□□□□□ -1.85
CCL1P22362 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CCL1P22362 TVP23BP1-201ENST00000557500 617 ntBASIC3.52□□□□□ -1.85
CCL1P22362 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC3.52□□□□□ -1.85
CCL1P22362 HNRNPCP4-201ENST00000571636 900 ntBASIC3.52□□□□□ -1.85
CCL1P22362 ELOCP34-201ENST00000604436 327 ntBASIC3.52□□□□□ -1.85
CCL1P22362 AC007390.2-201ENST00000606229 3803 ntBASIC3.52□□□□□ -1.85
CCL1P22362 AP000255.1-201ENST00000610276 676 ntBASIC3.52□□□□□ -1.85
CCL1P22362 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.52□□□□□ -1.85
CCL1P22362 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC3.52□□□□□ -1.85
CCL1P22362 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.52□□□□□ -1.85
CCL1P22362 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.52□□□□□ -1.85
CCL1P22362 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
CCL1P22362 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CCL1P22362 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CCL1P22362 IPO8P1-201ENST00000455509 3109 ntBASIC3.52□□□□□ -1.85
CCL1P22362 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 123.1 ms