Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
APOEP02649 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.41□□□□□ -1.7
APOEP02649 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.41□□□□□ -1.7
APOEP02649 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
APOEP02649 MIR365B-201ENST00000362317 111 ntBASIC4.41□□□□□ -1.7
APOEP02649 SNORA70.2-201ENST00000364506 135 ntBASIC4.41□□□□□ -1.7
APOEP02649 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC4.41□□□□□ -1.7
APOEP02649 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.41□□□□□ -1.7
APOEP02649 CYP4F29P-201ENST00000420685 446 ntBASIC4.41□□□□□ -1.7
APOEP02649 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.41□□□□□ -1.7
APOEP02649 AC234779.1-201ENST00000425910 285 ntBASIC4.41□□□□□ -1.7
APOEP02649 NIPA2P1-201ENST00000426223 976 ntBASIC4.41□□□□□ -1.7
APOEP02649 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
APOEP02649 EEF1A1P1-201ENST00000447052 739 ntBASIC4.41□□□□□ -1.7
APOEP02649 MTND4LP12-201ENST00000448237 295 ntBASIC4.41□□□□□ -1.7
APOEP02649 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
APOEP02649 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.41□□□□□ -1.7
APOEP02649 AC105918.1-201ENST00000474399 838 ntBASIC4.41□□□□□ -1.7
APOEP02649 RPS29P19-201ENST00000479709 171 ntBASIC4.41□□□□□ -1.7
APOEP02649 AC104164.2-201ENST00000496953 495 ntBASIC4.41□□□□□ -1.7
APOEP02649 AC025445.1-201ENST00000502728 300 ntBASIC4.41□□□□□ -1.7
APOEP02649 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC4.41□□□□□ -1.7
APOEP02649 SNORA31.9-201ENST00000516429 84 ntBASIC4.41□□□□□ -1.7
APOEP02649 MRPL49P2-201ENST00000521066 465 ntBASIC4.41□□□□□ -1.7
APOEP02649 AP003730.1-201ENST00000524605 285 ntBASIC4.41□□□□□ -1.7
APOEP02649 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC4.41□□□□□ -1.7
APOEP02649 PARP1P2-201ENST00000556806 195 ntBASIC4.41□□□□□ -1.7
APOEP02649 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.41□□□□□ -1.7
APOEP02649 OR1AB1P-201ENST00000585564 761 ntBASIC4.41□□□□□ -1.7
APOEP02649 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.41□□□□□ -1.7
APOEP02649 AC023043.4-201ENST00000612081 449 ntBASIC4.41□□□□□ -1.7
APOEP02649 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC4.41□□□□□ -1.7
APOEP02649 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.41□□□□□ -1.7
APOEP02649 NOL8P1-201ENST00000508336 3529 ntBASIC4.41□□□□□ -1.7
APOEP02649 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
APOEP02649 FTO-203ENST00000460382 1517 ntTSL 5 BASIC4.41□□□□□ -1.7
APOEP02649 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
APOEP02649 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
APOEP02649 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.4□□□□□ -1.7
APOEP02649 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
APOEP02649 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
APOEP02649 AL031985.3-201ENST00000565390 2449 ntBASIC4.4□□□□□ -1.7
APOEP02649 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.71
APOEP02649 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
APOEP02649 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
APOEP02649 AC068538.1-201ENST00000376856 336 ntBASIC4.4□□□□□ -1.71
APOEP02649 MIR3074-201ENST00000384885 81 ntBASIC4.4□□□□□ -1.71
APOEP02649 AL161909.1-201ENST00000397390 712 ntBASIC4.4□□□□□ -1.71
APOEP02649 AMZ2P2-201ENST00000406819 1057 ntBASIC4.4□□□□□ -1.71
APOEP02649 AC009302.1-201ENST00000417147 390 ntBASIC4.4□□□□□ -1.71
APOEP02649 COX6B1P7-201ENST00000430845 235 ntBASIC4.4□□□□□ -1.71
APOEP02649 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC4.4□□□□□ -1.71
APOEP02649 BTF3P10-201ENST00000433415 495 ntBASIC4.4□□□□□ -1.71
APOEP02649 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.4□□□□□ -1.71
APOEP02649 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.4□□□□□ -1.71
APOEP02649 PPIAP21-201ENST00000464473 501 ntBASIC4.4□□□□□ -1.71
APOEP02649 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
APOEP02649 RN7SL860P-201ENST00000473738 223 ntBASIC4.4□□□□□ -1.71
APOEP02649 AC016687.1-201ENST00000482574 353 ntBASIC4.4□□□□□ -1.71
APOEP02649 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
APOEP02649 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.4□□□□□ -1.71
APOEP02649 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.4□□□□□ -1.71
APOEP02649 OR5M7P-201ENST00000526140 972 ntBASIC4.4□□□□□ -1.71
APOEP02649 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.4□□□□□ -1.71
APOEP02649 AC135001.1-201ENST00000544546 283 ntBASIC4.4□□□□□ -1.71
APOEP02649 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.4□□□□□ -1.71
APOEP02649 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.4□□□□□ -1.71
APOEP02649 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC4.4□□□□□ -1.71
APOEP02649 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.4□□□□□ -1.71
APOEP02649 MIR4697-201ENST00000582977 78 ntBASIC4.4□□□□□ -1.71
APOEP02649 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.4□□□□□ -1.71
APOEP02649 AL161729.3-201ENST00000603533 673 ntBASIC4.4□□□□□ -1.71
APOEP02649 MIR432-201ENST00000606207 94 ntBASIC4.4□□□□□ -1.71
APOEP02649 AC074276.2-201ENST00000619891 348 ntBASIC4.4□□□□□ -1.71
APOEP02649 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.4□□□□□ -1.71
APOEP02649 AC008013.2-202ENST00000637965 364 ntBASIC4.4□□□□□ -1.71
APOEP02649 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.4□□□□□ -1.71
APOEP02649 AC134882.1-201ENST00000603738 1676 ntBASIC4.4□□□□□ -1.71
APOEP02649 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
APOEP02649 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.71
APOEP02649 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.71
APOEP02649 LARP1BP1-201ENST00000506036 1359 ntBASIC4.4□□□□□ -1.71
APOEP02649 AC008725.1-201ENST00000605123 2263 ntBASIC4.39□□□□□ -1.71
APOEP02649 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
APOEP02649 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
APOEP02649 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
APOEP02649 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
APOEP02649 LINC02471-203ENST00000641941 4752 ntBASIC4.39□□□□□ -1.71
APOEP02649 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
APOEP02649 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.39□□□□□ -1.71
APOEP02649 MIR93-201ENST00000385024 80 ntBASIC4.39□□□□□ -1.71
APOEP02649 RN7SKP182-201ENST00000410772 298 ntBASIC4.39□□□□□ -1.71
APOEP02649 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.39□□□□□ -1.71
APOEP02649 AL391219.1-201ENST00000422570 483 ntBASIC4.39□□□□□ -1.71
APOEP02649 RWDD4P2-201ENST00000426392 563 ntBASIC4.39□□□□□ -1.71
APOEP02649 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.39□□□□□ -1.71
APOEP02649 AL353748.1-201ENST00000440753 474 ntBASIC4.39□□□□□ -1.71
APOEP02649 AL451050.1-201ENST00000450126 415 ntBASIC4.39□□□□□ -1.71
APOEP02649 HSPE1P22-201ENST00000456856 327 ntBASIC4.39□□□□□ -1.71
APOEP02649 RWDD4P1-201ENST00000488019 565 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms