Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 uc_338.13-201ENST00000618243 179 ntBASIC4.18□□□□□ -1.74
CLDN9O95484 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.18□□□□□ -1.74
CLDN9O95484 ASNSP1-201ENST00000518311 1939 ntBASIC4.18□□□□□ -1.74
CLDN9O95484 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CLDN9O95484 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CLDN9O95484 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CLDN9O95484 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.18□□□□□ -1.74
CLDN9O95484 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
CLDN9O95484 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CLDN9O95484 AC012618.3-205ENST00000637896 1496 ntBASIC4.18□□□□□ -1.74
CLDN9O95484 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.17□□□□□ -1.74
CLDN9O95484 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.17□□□□□ -1.74
CLDN9O95484 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CLDN9O95484 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
CLDN9O95484 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.17□□□□□ -1.74
CLDN9O95484 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CLDN9O95484 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
CLDN9O95484 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.17□□□□□ -1.74
CLDN9O95484 MIR331-201ENST00000362302 94 ntBASIC4.17□□□□□ -1.74
CLDN9O95484 RNU6-398P-201ENST00000384143 109 ntBASIC4.17□□□□□ -1.74
CLDN9O95484 MIR129-1-201ENST00000384972 72 ntBASIC4.17□□□□□ -1.74
CLDN9O95484 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC4.17□□□□□ -1.74
CLDN9O95484 RPS3AP23-201ENST00000401762 784 ntBASIC4.17□□□□□ -1.74
CLDN9O95484 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC4.17□□□□□ -1.74
CLDN9O95484 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.17□□□□□ -1.74
CLDN9O95484 AC073464.3-201ENST00000422564 712 ntBASIC4.17□□□□□ -1.74
CLDN9O95484 RPS12P5-201ENST00000423449 371 ntBASIC4.17□□□□□ -1.74
CLDN9O95484 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.17□□□□□ -1.74
CLDN9O95484 FTH1P16-201ENST00000435241 552 ntBASIC4.17□□□□□ -1.74
CLDN9O95484 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.17□□□□□ -1.74
CLDN9O95484 AC245517.2-201ENST00000442890 346 ntBASIC4.17□□□□□ -1.74
CLDN9O95484 AC009220.1-201ENST00000451614 275 ntBASIC4.17□□□□□ -1.74
CLDN9O95484 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.17□□□□□ -1.74
CLDN9O95484 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.17□□□□□ -1.74
CLDN9O95484 NDUFA12P1-201ENST00000455914 406 ntBASIC4.17□□□□□ -1.74
CLDN9O95484 PPIAP21-201ENST00000464473 501 ntBASIC4.17□□□□□ -1.74
CLDN9O95484 AC108145.1-201ENST00000503770 153 ntBASIC4.17□□□□□ -1.74
CLDN9O95484 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.17□□□□□ -1.74
CLDN9O95484 RN7SKP92-201ENST00000517266 244 ntBASIC4.17□□□□□ -1.74
CLDN9O95484 OR5AN2P-201ENST00000534535 896 ntBASIC4.17□□□□□ -1.74
CLDN9O95484 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.17□□□□□ -1.74
CLDN9O95484 PDCD5P1-201ENST00000543528 309 ntBASIC4.17□□□□□ -1.74
CLDN9O95484 AL109766.1-201ENST00000555080 552 ntBASIC4.17□□□□□ -1.74
CLDN9O95484 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.17□□□□□ -1.74
CLDN9O95484 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.17□□□□□ -1.74
CLDN9O95484 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CLDN9O95484 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.17□□□□□ -1.74
CLDN9O95484 AC090953.1-201ENST00000604305 1092 ntBASIC4.17□□□□□ -1.74
CLDN9O95484 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.17□□□□□ -1.74
CLDN9O95484 AL031666.3-201ENST00000609320 1006 ntBASIC4.17□□□□□ -1.74
CLDN9O95484 AL158196.1-201ENST00000616786 434 ntBASIC4.17□□□□□ -1.74
CLDN9O95484 AC009704.2-201ENST00000618739 483 ntBASIC4.17□□□□□ -1.74
CLDN9O95484 AC007546.1-201ENST00000619452 559 ntBASIC4.17□□□□□ -1.74
CLDN9O95484 MIR6810-201ENST00000622701 70 ntBASIC4.17□□□□□ -1.74
CLDN9O95484 AC010435.1-201ENST00000623353 1177 ntBASIC4.17□□□□□ -1.74
CLDN9O95484 AC079298.2-201ENST00000623885 459 ntBASIC4.17□□□□□ -1.74
CLDN9O95484 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.17□□□□□ -1.74
CLDN9O95484 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.17□□□□□ -1.74
CLDN9O95484 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CLDN9O95484 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CLDN9O95484 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CLDN9O95484 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CLDN9O95484 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.17□□□□□ -1.74
CLDN9O95484 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.17□□□□□ -1.74
CLDN9O95484 AL451142.2-201ENST00000429076 2090 ntBASIC4.17□□□□□ -1.74
CLDN9O95484 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
CLDN9O95484 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CLDN9O95484 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CLDN9O95484 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CLDN9O95484 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
CLDN9O95484 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.16□□□□□ -1.74
CLDN9O95484 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.16□□□□□ -1.74
CLDN9O95484 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
CLDN9O95484 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CLDN9O95484 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
CLDN9O95484 AL590139.1-201ENST00000416267 400 ntBASIC4.16□□□□□ -1.74
CLDN9O95484 RPL23AP1-201ENST00000428990 471 ntBASIC4.16□□□□□ -1.74
CLDN9O95484 GSTA7P-201ENST00000438425 448 ntBASIC4.16□□□□□ -1.74
CLDN9O95484 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC4.16□□□□□ -1.74
CLDN9O95484 AC023512.1-201ENST00000444513 499 ntBASIC4.16□□□□□ -1.74
CLDN9O95484 UBA52P3-201ENST00000491303 382 ntBASIC4.16□□□□□ -1.74
CLDN9O95484 AC090543.1-201ENST00000492168 485 ntBASIC4.16□□□□□ -1.74
CLDN9O95484 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.16□□□□□ -1.74
CLDN9O95484 AC010374.1-201ENST00000503762 1237 ntBASIC4.16□□□□□ -1.74
CLDN9O95484 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CLDN9O95484 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.16□□□□□ -1.74
CLDN9O95484 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.16□□□□□ -1.74
CLDN9O95484 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CLDN9O95484 RNU6-751P-201ENST00000516382 101 ntBASIC4.16□□□□□ -1.74
CLDN9O95484 AC006064.5-201ENST00000541782 248 ntBASIC4.16□□□□□ -1.74
CLDN9O95484 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC4.16□□□□□ -1.74
CLDN9O95484 AC063949.1-201ENST00000552900 865 ntBASIC4.16□□□□□ -1.74
CLDN9O95484 AC090312.1-201ENST00000580637 348 ntBASIC4.16□□□□□ -1.74
CLDN9O95484 MIR4697-201ENST00000582977 78 ntBASIC4.16□□□□□ -1.74
CLDN9O95484 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.16□□□□□ -1.74
CLDN9O95484 RPL12P25-202ENST00000598100 674 ntBASIC4.16□□□□□ -1.74
CLDN9O95484 AC093765.1-201ENST00000603758 881 ntBASIC4.16□□□□□ -1.74
CLDN9O95484 AL049844.2-201ENST00000604280 628 ntBASIC4.16□□□□□ -1.74
CLDN9O95484 AC113403.1-201ENST00000604910 193 ntBASIC4.16□□□□□ -1.74
CLDN9O95484 AC074276.2-201ENST00000619891 348 ntBASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms