Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 AC073342.3-201ENST00000624211 193 ntBASIC4.12□□□□□ -1.75
SEMA3DO95025 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.12□□□□□ -1.75
SEMA3DO95025 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.12□□□□□ -1.75
SEMA3DO95025 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC4.12□□□□□ -1.75
SEMA3DO95025 EIF2AP4-201ENST00000424793 1781 ntBASIC4.12□□□□□ -1.75
SEMA3DO95025 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
SEMA3DO95025 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SEMA3DO95025 AL136964.1-201ENST00000622038 2990 ntBASIC4.11□□□□□ -1.75
SEMA3DO95025 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SEMA3DO95025 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.11□□□□□ -1.75
SEMA3DO95025 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
SEMA3DO95025 AC025031.4-201ENST00000621248 3271 ntBASIC4.11□□□□□ -1.75
SEMA3DO95025 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
SEMA3DO95025 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
SEMA3DO95025 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.11□□□□□ -1.75
SEMA3DO95025 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
SEMA3DO95025 MIR331-201ENST00000362302 94 ntBASIC4.11□□□□□ -1.75
SEMA3DO95025 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
SEMA3DO95025 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
SEMA3DO95025 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC4.11□□□□□ -1.75
SEMA3DO95025 CYP4F29P-201ENST00000420685 446 ntBASIC4.11□□□□□ -1.75
SEMA3DO95025 AL391219.1-201ENST00000422570 483 ntBASIC4.11□□□□□ -1.75
SEMA3DO95025 CEACAMP1-201ENST00000434624 1035 ntBASIC4.11□□□□□ -1.75
SEMA3DO95025 FTH1P16-201ENST00000435241 552 ntBASIC4.11□□□□□ -1.75
SEMA3DO95025 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.11□□□□□ -1.75
SEMA3DO95025 PHBP16-201ENST00000446318 950 ntBASIC4.11□□□□□ -1.75
SEMA3DO95025 RPL7P31-201ENST00000450192 724 ntBASIC4.11□□□□□ -1.75
SEMA3DO95025 AC079804.1-201ENST00000461922 436 ntBASIC4.11□□□□□ -1.75
SEMA3DO95025 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SEMA3DO95025 AL592156.1-201ENST00000508758 304 ntBASIC4.11□□□□□ -1.75
SEMA3DO95025 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.11□□□□□ -1.75
SEMA3DO95025 CCNHP1-201ENST00000513311 678 ntBASIC4.11□□□□□ -1.75
SEMA3DO95025 OR8G5-201ENST00000524943 1041 ntBASIC4.11□□□□□ -1.75
SEMA3DO95025 RFPL1S-203ENST00000539579 330 ntBASIC4.11□□□□□ -1.75
SEMA3DO95025 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.11□□□□□ -1.75
SEMA3DO95025 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.11□□□□□ -1.75
SEMA3DO95025 MIR4715-201ENST00000584117 79 ntBASIC4.11□□□□□ -1.75
SEMA3DO95025 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC4.11□□□□□ -1.75
SEMA3DO95025 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.11□□□□□ -1.75
SEMA3DO95025 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
SEMA3DO95025 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SEMA3DO95025 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
SEMA3DO95025 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SEMA3DO95025 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
SEMA3DO95025 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SEMA3DO95025 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC4.1□□□□□ -1.75
SEMA3DO95025 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.1□□□□□ -1.75
SEMA3DO95025 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.1□□□□□ -1.75
SEMA3DO95025 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.1□□□□□ -1.75
SEMA3DO95025 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
SEMA3DO95025 SNORA62.2-201ENST00000364672 152 ntBASIC4.1□□□□□ -1.75
SEMA3DO95025 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SEMA3DO95025 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.1□□□□□ -1.75
SEMA3DO95025 RNA5SP105-201ENST00000391123 113 ntBASIC4.1□□□□□ -1.75
SEMA3DO95025 MIR1179-201ENST00000408703 91 ntBASIC4.1□□□□□ -1.75
SEMA3DO95025 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.1□□□□□ -1.75
SEMA3DO95025 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SEMA3DO95025 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.1□□□□□ -1.75
SEMA3DO95025 ELOCP19-201ENST00000411919 318 ntBASIC4.1□□□□□ -1.75
SEMA3DO95025 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC4.1□□□□□ -1.75
SEMA3DO95025 AL161631.1-201ENST00000417933 486 ntBASIC4.1□□□□□ -1.75
SEMA3DO95025 RPS27AP7-201ENST00000422792 455 ntBASIC4.1□□□□□ -1.75
SEMA3DO95025 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.1□□□□□ -1.75
SEMA3DO95025 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.1□□□□□ -1.75
SEMA3DO95025 RPL23AP81-201ENST00000455252 467 ntBASIC4.1□□□□□ -1.75
SEMA3DO95025 RPL7P32-201ENST00000457119 744 ntBASIC4.1□□□□□ -1.75
SEMA3DO95025 RPL7P22-201ENST00000466005 733 ntBASIC4.1□□□□□ -1.75
SEMA3DO95025 RPS26P15-201ENST00000488067 348 ntBASIC4.1□□□□□ -1.75
SEMA3DO95025 AC092045.1-201ENST00000495716 1231 ntBASIC4.1□□□□□ -1.75
SEMA3DO95025 AP000926.3-201ENST00000497201 299 ntBASIC4.1□□□□□ -1.75
SEMA3DO95025 AC108145.1-201ENST00000503770 153 ntBASIC4.1□□□□□ -1.75
SEMA3DO95025 BNIP3P41-201ENST00000503774 571 ntBASIC4.1□□□□□ -1.75
SEMA3DO95025 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC4.1□□□□□ -1.75
SEMA3DO95025 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC4.1□□□□□ -1.75
SEMA3DO95025 IGLVIV-65-201ENST00000517313 360 ntBASIC4.1□□□□□ -1.75
SEMA3DO95025 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC4.1□□□□□ -1.75
SEMA3DO95025 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.1□□□□□ -1.75
SEMA3DO95025 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SEMA3DO95025 AC025857.1-201ENST00000525252 377 ntBASIC4.1□□□□□ -1.75
SEMA3DO95025 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.1□□□□□ -1.75
SEMA3DO95025 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SEMA3DO95025 CYP4A43P-201ENST00000568156 121 ntBASIC4.1□□□□□ -1.75
SEMA3DO95025 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.1□□□□□ -1.75
SEMA3DO95025 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.1□□□□□ -1.75
SEMA3DO95025 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.1□□□□□ -1.75
SEMA3DO95025 AC008536.1-201ENST00000602872 669 ntBASIC4.1□□□□□ -1.75
SEMA3DO95025 AC090953.1-201ENST00000604305 1092 ntBASIC4.1□□□□□ -1.75
SEMA3DO95025 AL031666.3-201ENST00000609320 1006 ntBASIC4.1□□□□□ -1.75
SEMA3DO95025 AC009452.1-201ENST00000640823 606 ntBASIC4.1□□□□□ -1.75
SEMA3DO95025 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SEMA3DO95025 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
SEMA3DO95025 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SEMA3DO95025 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.1□□□□□ -1.75
SEMA3DO95025 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
SEMA3DO95025 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC4.1□□□□□ -1.75
SEMA3DO95025 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SEMA3DO95025 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.1□□□□□ -1.75
SEMA3DO95025 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SEMA3DO95025 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SEMA3DO95025 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms