Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 AL358232.1-201ENST00000448030 501 ntBASIC4.45□□□□□ -1.7
TRIM4Q9C037 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.45□□□□□ -1.7
TRIM4Q9C037 FABP3P2-201ENST00000453169 399 ntBASIC4.45□□□□□ -1.7
TRIM4Q9C037 EIF2S2P4-201ENST00000461070 984 ntBASIC4.45□□□□□ -1.7
TRIM4Q9C037 MTND4LP31-201ENST00000514859 294 ntBASIC4.45□□□□□ -1.7
TRIM4Q9C037 SNORA67.7-201ENST00000516664 135 ntBASIC4.45□□□□□ -1.7
TRIM4Q9C037 MTCO1P49-201ENST00000523429 802 ntBASIC4.45□□□□□ -1.7
TRIM4Q9C037 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.45□□□□□ -1.7
TRIM4Q9C037 AP000889.1-201ENST00000530968 660 ntBASIC4.45□□□□□ -1.7
TRIM4Q9C037 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.45□□□□□ -1.7
TRIM4Q9C037 AC068831.4-201ENST00000556118 109 ntBASIC4.45□□□□□ -1.7
TRIM4Q9C037 CYP4A43P-201ENST00000568156 121 ntBASIC4.45□□□□□ -1.7
TRIM4Q9C037 MIR3138-201ENST00000585238 82 ntBASIC4.45□□□□□ -1.7
TRIM4Q9C037 AC015911.5-201ENST00000587076 451 ntBASIC4.45□□□□□ -1.7
TRIM4Q9C037 AC005520.3-201ENST00000602874 370 ntBASIC4.45□□□□□ -1.7
TRIM4Q9C037 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC4.45□□□□□ -1.7
TRIM4Q9C037 AL353726.1-201ENST00000614041 1000 ntBASIC4.45□□□□□ -1.7
TRIM4Q9C037 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC4.45□□□□□ -1.7
TRIM4Q9C037 AC233309.1-201ENST00000619522 751 ntBASIC4.45□□□□□ -1.7
TRIM4Q9C037 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4.45□□□□□ -1.7
TRIM4Q9C037 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
TRIM4Q9C037 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
TRIM4Q9C037 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
TRIM4Q9C037 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.45□□□□□ -1.7
TRIM4Q9C037 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
TRIM4Q9C037 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
TRIM4Q9C037 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
TRIM4Q9C037 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.45□□□□□ -1.7
TRIM4Q9C037 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.44□□□□□ -1.7
TRIM4Q9C037 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.44□□□□□ -1.7
TRIM4Q9C037 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
TRIM4Q9C037 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
TRIM4Q9C037 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
TRIM4Q9C037 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.44□□□□□ -1.7
TRIM4Q9C037 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.44□□□□□ -1.7
TRIM4Q9C037 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
TRIM4Q9C037 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
TRIM4Q9C037 RNU6-1279P-201ENST00000383917 103 ntBASIC4.44□□□□□ -1.7
TRIM4Q9C037 VN1R8P-201ENST00000407739 893 ntBASIC4.44□□□□□ -1.7
TRIM4Q9C037 NRBF2P2-201ENST00000413087 861 ntBASIC4.44□□□□□ -1.7
TRIM4Q9C037 AL450992.3-201ENST00000413192 568 ntBASIC4.44□□□□□ -1.7
TRIM4Q9C037 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.44□□□□□ -1.7
TRIM4Q9C037 AC114755.2-201ENST00000413520 361 ntBASIC4.44□□□□□ -1.7
TRIM4Q9C037 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.44□□□□□ -1.7
TRIM4Q9C037 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.44□□□□□ -1.7
TRIM4Q9C037 FHP1-201ENST00000442741 703 ntBASIC4.44□□□□□ -1.7
TRIM4Q9C037 VN1R34P-201ENST00000447387 883 ntBASIC4.44□□□□□ -1.7
TRIM4Q9C037 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC4.44□□□□□ -1.7
TRIM4Q9C037 AC108463.1-201ENST00000450258 347 ntBASIC4.44□□□□□ -1.7
TRIM4Q9C037 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC4.44□□□□□ -1.7
TRIM4Q9C037 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.44□□□□□ -1.7
TRIM4Q9C037 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
TRIM4Q9C037 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.44□□□□□ -1.7
TRIM4Q9C037 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.44□□□□□ -1.7
TRIM4Q9C037 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC4.44□□□□□ -1.7
TRIM4Q9C037 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.44□□□□□ -1.7
TRIM4Q9C037 RNU1-45P-201ENST00000517191 141 ntBASIC4.44□□□□□ -1.7
TRIM4Q9C037 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.44□□□□□ -1.7
TRIM4Q9C037 AC007424.1-203ENST00000554613 687 ntBASIC4.44□□□□□ -1.7
TRIM4Q9C037 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC4.44□□□□□ -1.7
TRIM4Q9C037 MIR3158-1-201ENST00000583596 81 ntBASIC4.44□□□□□ -1.7
TRIM4Q9C037 uc_338.32-201ENST00000615087 172 ntBASIC4.44□□□□□ -1.7
TRIM4Q9C037 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.44□□□□□ -1.7
TRIM4Q9C037 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
TRIM4Q9C037 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.44□□□□□ -1.7
TRIM4Q9C037 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.44□□□□□ -1.7
TRIM4Q9C037 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
TRIM4Q9C037 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
TRIM4Q9C037 AC017007.4-201ENST00000503353 1352 ntBASIC4.43□□□□□ -1.7
TRIM4Q9C037 ZFRP1-201ENST00000457579 2970 ntBASIC4.43□□□□□ -1.7
TRIM4Q9C037 AC106871.1-201ENST00000568324 3102 ntBASIC4.43□□□□□ -1.7
TRIM4Q9C037 MIR554-201ENST00000384874 96 ntBASIC4.43□□□□□ -1.7
TRIM4Q9C037 RNU1-82P-201ENST00000390851 165 ntBASIC4.43□□□□□ -1.7
TRIM4Q9C037 ST13P16-201ENST00000401760 781 ntBASIC4.43□□□□□ -1.7
TRIM4Q9C037 AC009302.1-201ENST00000417147 390 ntBASIC4.43□□□□□ -1.7
TRIM4Q9C037 RPS12P10-201ENST00000427031 377 ntBASIC4.43□□□□□ -1.7
TRIM4Q9C037 PHBP16-201ENST00000446318 950 ntBASIC4.43□□□□□ -1.7
TRIM4Q9C037 AC114755.5-201ENST00000447760 831 ntBASIC4.43□□□□□ -1.7
TRIM4Q9C037 NUTF2P3-201ENST00000448540 384 ntBASIC4.43□□□□□ -1.7
TRIM4Q9C037 AC079168.2-201ENST00000453977 416 ntBASIC4.43□□□□□ -1.7
TRIM4Q9C037 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.43□□□□□ -1.7
TRIM4Q9C037 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
TRIM4Q9C037 IGLVIV-65-201ENST00000517313 360 ntBASIC4.43□□□□□ -1.7
TRIM4Q9C037 IGKV2D-23-201ENST00000518179 286 ntBASIC4.43□□□□□ -1.7
TRIM4Q9C037 MRPL49P2-201ENST00000521066 465 ntBASIC4.43□□□□□ -1.7
TRIM4Q9C037 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.43□□□□□ -1.7
TRIM4Q9C037 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.43□□□□□ -1.7
TRIM4Q9C037 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC4.43□□□□□ -1.7
TRIM4Q9C037 RPL7P50-201ENST00000600588 727 ntBASIC4.43□□□□□ -1.7
TRIM4Q9C037 AC005191.1-201ENST00000603950 358 ntBASIC4.43□□□□□ -1.7
TRIM4Q9C037 FAM27B-201ENST00000610601 213 ntBASIC4.43□□□□□ -1.7
TRIM4Q9C037 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.43□□□□□ -1.7
TRIM4Q9C037 AC004777.1-201ENST00000624317 287 ntBASIC4.43□□□□□ -1.7
TRIM4Q9C037 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.43□□□□□ -1.7
TRIM4Q9C037 AC009951.1-201ENST00000623674 2614 ntBASIC4.43□□□□□ -1.7
TRIM4Q9C037 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.43□□□□□ -1.7
TRIM4Q9C037 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
TRIM4Q9C037 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
TRIM4Q9C037 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
TRIM4Q9C037 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 161.6 ms