Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 MTCO1P15-201ENST00000529569 1526 ntBASIC3.31□□□□□ -1.88
SSBP1Q04837 AC103591.2-201ENST00000265259 766 ntBASIC3.31□□□□□ -1.88
SSBP1Q04837 RNA5SP443-201ENST00000363083 132 ntBASIC3.31□□□□□ -1.88
SSBP1Q04837 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC3.31□□□□□ -1.88
SSBP1Q04837 AL109941.1-201ENST00000401925 229 ntBASIC3.31□□□□□ -1.88
SSBP1Q04837 HSPD1P16-201ENST00000402302 394 ntBASIC3.31□□□□□ -1.88
SSBP1Q04837 MIR1183-201ENST00000408856 89 ntBASIC3.31□□□□□ -1.88
SSBP1Q04837 SNORA57.3-201ENST00000411095 141 ntBASIC3.31□□□□□ -1.88
SSBP1Q04837 NRBF2P2-201ENST00000413087 861 ntBASIC3.31□□□□□ -1.88
SSBP1Q04837 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC3.31□□□□□ -1.88
SSBP1Q04837 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC3.31□□□□□ -1.88
SSBP1Q04837 AC006989.1-201ENST00000427212 131 ntBASIC3.31□□□□□ -1.88
SSBP1Q04837 HIGD1AP12-201ENST00000427832 281 ntBASIC3.31□□□□□ -1.88
SSBP1Q04837 MOB1AP1-201ENST00000430903 535 ntBASIC3.31□□□□□ -1.88
SSBP1Q04837 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.31□□□□□ -1.88
SSBP1Q04837 RPS4XP4-201ENST00000443195 763 ntBASIC3.31□□□□□ -1.88
SSBP1Q04837 RPS3AP41-201ENST00000462701 778 ntBASIC3.31□□□□□ -1.88
SSBP1Q04837 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC3.31□□□□□ -1.88
SSBP1Q04837 AC084198.1-201ENST00000477747 402 ntBASIC3.31□□□□□ -1.88
SSBP1Q04837 RPL7AP10-201ENST00000481016 791 ntBASIC3.31□□□□□ -1.88
SSBP1Q04837 AC004815.1-201ENST00000484185 331 ntBASIC3.31□□□□□ -1.88
SSBP1Q04837 RNU6-1334P-201ENST00000516032 105 ntBASIC3.31□□□□□ -1.88
SSBP1Q04837 IGLVIV-64-201ENST00000518581 301 ntBASIC3.31□□□□□ -1.88
SSBP1Q04837 TRAV8-5-201ENST00000537369 341 ntBASIC3.31□□□□□ -1.88
SSBP1Q04837 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC3.31□□□□□ -1.88
SSBP1Q04837 PDCD5P1-201ENST00000543528 309 ntBASIC3.31□□□□□ -1.88
SSBP1Q04837 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.31□□□□□ -1.88
SSBP1Q04837 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC3.31□□□□□ -1.88
SSBP1Q04837 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.31□□□□□ -1.88
SSBP1Q04837 HMGB3P26-201ENST00000560051 582 ntBASIC3.31□□□□□ -1.88
SSBP1Q04837 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC3.31□□□□□ -1.88
SSBP1Q04837 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC3.31□□□□□ -1.88
SSBP1Q04837 MIR4489-201ENST00000578869 62 ntBASIC3.31□□□□□ -1.88
SSBP1Q04837 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC3.31□□□□□ -1.88
SSBP1Q04837 MIR4738-201ENST00000579134 87 ntBASIC3.31□□□□□ -1.88
SSBP1Q04837 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC3.31□□□□□ -1.88
SSBP1Q04837 AC011492.1-201ENST00000600023 315 ntBASIC3.31□□□□□ -1.88
SSBP1Q04837 AL161729.3-201ENST00000603533 673 ntBASIC3.31□□□□□ -1.88
SSBP1Q04837 AL137849.1-201ENST00000604767 169 ntBASIC3.31□□□□□ -1.88
SSBP1Q04837 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC3.31□□□□□ -1.88
SSBP1Q04837 AC004825.2-201ENST00000616634 455 ntBASIC3.31□□□□□ -1.88
SSBP1Q04837 AL645927.2-201ENST00000618350 349 ntBASIC3.31□□□□□ -1.88
SSBP1Q04837 AP001005.3-201ENST00000622049 129 ntBASIC3.31□□□□□ -1.88
SSBP1Q04837 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.31□□□□□ -1.88
SSBP1Q04837 OR5AC4P-202ENST00000642086 985 ntBASIC3.31□□□□□ -1.88
SSBP1Q04837 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.31□□□□□ -1.88
SSBP1Q04837 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SSBP1Q04837 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SSBP1Q04837 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC3.31□□□□□ -1.88
SSBP1Q04837 AC027228.2-201ENST00000567141 2154 ntBASIC3.31□□□□□ -1.88
SSBP1Q04837 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
SSBP1Q04837 C4BPAP1-201ENST00000415474 1893 ntBASIC3.3□□□□□ -1.88
SSBP1Q04837 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.3□□□□□ -1.88
SSBP1Q04837 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SSBP1Q04837 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SSBP1Q04837 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SSBP1Q04837 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SSBP1Q04837 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SSBP1Q04837 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SSBP1Q04837 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
SSBP1Q04837 AL645927.1-201ENST00000396783 406 ntBASIC3.3□□□□□ -1.88
SSBP1Q04837 RNU4-34P-201ENST00000410431 124 ntBASIC3.3□□□□□ -1.88
SSBP1Q04837 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC3.3□□□□□ -1.88
SSBP1Q04837 TEX41-205ENST00000431734 529 ntTSL 4 BASIC3.3□□□□□ -1.88
SSBP1Q04837 RPL12P3-201ENST00000440080 396 ntBASIC3.3□□□□□ -1.88
SSBP1Q04837 FCF1P7-201ENST00000451185 558 ntBASIC3.3□□□□□ -1.88
SSBP1Q04837 AC006539.3-201ENST00000454258 129 ntBASIC3.3□□□□□ -1.88
SSBP1Q04837 RPS3AP53-201ENST00000454716 778 ntBASIC3.3□□□□□ -1.88
SSBP1Q04837 AC107015.1-201ENST00000466902 747 ntBASIC3.3□□□□□ -1.88
SSBP1Q04837 RPL23AP14-201ENST00000468281 468 ntBASIC3.3□□□□□ -1.88
SSBP1Q04837 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.3□□□□□ -1.88
SSBP1Q04837 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC3.3□□□□□ -1.88
SSBP1Q04837 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC3.3□□□□□ -1.88
SSBP1Q04837 BRD9P1-201ENST00000529855 560 ntBASIC3.3□□□□□ -1.88
SSBP1Q04837 CYCSP29-201ENST00000533731 318 ntBASIC3.3□□□□□ -1.88
SSBP1Q04837 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.3□□□□□ -1.88
SSBP1Q04837 AGGF1P8-201ENST00000562979 1000 ntBASIC3.3□□□□□ -1.88
SSBP1Q04837 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC3.3□□□□□ -1.88
SSBP1Q04837 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC3.3□□□□□ -1.88
SSBP1Q04837 KLKP1-201ENST00000595979 403 ntBASIC3.3□□□□□ -1.88
SSBP1Q04837 SNX6P1-201ENST00000601728 1224 ntBASIC3.3□□□□□ -1.88
SSBP1Q04837 AL365503.1-201ENST00000605247 905 ntBASIC3.3□□□□□ -1.88
SSBP1Q04837 MIR7153-201ENST00000637758 57 ntBASIC3.3□□□□□ -1.88
SSBP1Q04837 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC3.3□□□□□ -1.88
SSBP1Q04837 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
SSBP1Q04837 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SSBP1Q04837 AC025031.4-201ENST00000621248 3271 ntBASIC3.3□□□□□ -1.88
SSBP1Q04837 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SSBP1Q04837 USP9YP4-201ENST00000424401 1745 ntBASIC3.3□□□□□ -1.88
SSBP1Q04837 SPATA2P1-201ENST00000431223 2055 ntBASIC3.29□□□□□ -1.88
SSBP1Q04837 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.29□□□□□ -1.88
SSBP1Q04837 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SSBP1Q04837 RNA5SP399-201ENST00000364003 117 ntBASIC3.29□□□□□ -1.88
SSBP1Q04837 MIR184-201ENST00000384962 84 ntBASIC3.29□□□□□ -1.88
SSBP1Q04837 MIR199A2-201ENST00000385289 110 ntBASIC3.29□□□□□ -1.88
SSBP1Q04837 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.29□□□□□ -1.88
SSBP1Q04837 RPS26P8-201ENST00000393490 348 ntBASIC3.29□□□□□ -1.88
SSBP1Q04837 RN7SKP229-201ENST00000410465 302 ntBASIC3.29□□□□□ -1.88
SSBP1Q04837 RPL6P21-201ENST00000418672 846 ntBASIC3.29□□□□□ -1.88
SSBP1Q04837 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms