Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 AC104164.2-201ENST00000496953 495 ntBASIC3.79□□□□□ -1.8
LSM6P62312 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC3.79□□□□□ -1.8
LSM6P62312 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.79□□□□□ -1.8
LSM6P62312 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
LSM6P62312 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC3.79□□□□□ -1.8
LSM6P62312 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
LSM6P62312 MIR4512-201ENST00000583257 77 ntBASIC3.79□□□□□ -1.8
LSM6P62312 AC034236.3-201ENST00000605999 461 ntBASIC3.79□□□□□ -1.8
LSM6P62312 MKKS-203ENST00000609375 882 ntTSL 2 BASIC3.79□□□□□ -1.8
LSM6P62312 AC007546.1-201ENST00000619452 559 ntBASIC3.79□□□□□ -1.8
LSM6P62312 CFTRP2-201ENST00000634304 199 ntBASIC3.79□□□□□ -1.8
LSM6P62312 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC3.79□□□□□ -1.8
LSM6P62312 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
LSM6P62312 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.79□□□□□ -1.8
LSM6P62312 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
LSM6P62312 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC3.79□□□□□ -1.8
LSM6P62312 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC3.79□□□□□ -1.8
LSM6P62312 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC3.79□□□□□ -1.8
LSM6P62312 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
LSM6P62312 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.78□□□□□ -1.8
LSM6P62312 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
LSM6P62312 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
LSM6P62312 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
LSM6P62312 AC025031.4-201ENST00000621248 3271 ntBASIC3.78□□□□□ -1.8
LSM6P62312 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
LSM6P62312 XIAPP3-201ENST00000312918 795 ntBASIC3.78□□□□□ -1.8
LSM6P62312 SNORA62.2-201ENST00000364672 152 ntBASIC3.78□□□□□ -1.8
LSM6P62312 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
LSM6P62312 RNU6-398P-201ENST00000384143 109 ntBASIC3.78□□□□□ -1.8
LSM6P62312 SLC4A1APP1-201ENST00000419995 602 ntBASIC3.78□□□□□ -1.8
LSM6P62312 AC069213.2-201ENST00000420238 366 ntBASIC3.78□□□□□ -1.8
LSM6P62312 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC3.78□□□□□ -1.8
LSM6P62312 MTCO3P21-201ENST00000430791 643 ntBASIC3.78□□□□□ -1.8
LSM6P62312 HLA-N-201ENST00000437516 135 ntBASIC3.78□□□□□ -1.8
LSM6P62312 PHBP16-201ENST00000446318 950 ntBASIC3.78□□□□□ -1.8
LSM6P62312 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC3.78□□□□□ -1.8
LSM6P62312 RN7SL98P-201ENST00000462271 300 ntBASIC3.78□□□□□ -1.8
LSM6P62312 RPL21P71-201ENST00000465598 459 ntBASIC3.78□□□□□ -1.8
LSM6P62312 RPS29P22-201ENST00000472363 168 ntBASIC3.78□□□□□ -1.8
LSM6P62312 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
LSM6P62312 AC108145.1-201ENST00000503770 153 ntBASIC3.78□□□□□ -1.8
LSM6P62312 BNIP3P41-201ENST00000503774 571 ntBASIC3.78□□□□□ -1.8
LSM6P62312 AL592156.1-201ENST00000508758 304 ntBASIC3.78□□□□□ -1.8
LSM6P62312 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC3.78□□□□□ -1.8
LSM6P62312 PARP4P3-201ENST00000510265 317 ntBASIC3.78□□□□□ -1.8
LSM6P62312 RNA5SP73-201ENST00000516744 108 ntBASIC3.78□□□□□ -1.8
LSM6P62312 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC3.78□□□□□ -1.8
LSM6P62312 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC3.78□□□□□ -1.8
LSM6P62312 OR5M7P-201ENST00000526140 972 ntBASIC3.78□□□□□ -1.8
LSM6P62312 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC3.78□□□□□ -1.8
LSM6P62312 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC3.78□□□□□ -1.8
LSM6P62312 AC007424.1-203ENST00000554613 687 ntBASIC3.78□□□□□ -1.8
LSM6P62312 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC3.78□□□□□ -1.8
LSM6P62312 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC3.78□□□□□ -1.8
LSM6P62312 AC008536.1-201ENST00000602872 669 ntBASIC3.78□□□□□ -1.8
LSM6P62312 MIR432-201ENST00000606207 94 ntBASIC3.78□□□□□ -1.8
LSM6P62312 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC3.78□□□□□ -1.8
LSM6P62312 AL096803.3-201ENST00000609032 532 ntBASIC3.78□□□□□ -1.8
LSM6P62312 AL031666.3-201ENST00000609320 1006 ntBASIC3.78□□□□□ -1.8
LSM6P62312 MIR7702-201ENST00000621931 59 ntBASIC3.78□□□□□ -1.8
LSM6P62312 MIR4727-201ENST00000622232 55 ntBASIC3.78□□□□□ -1.8
LSM6P62312 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC3.78□□□□□ -1.8
LSM6P62312 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
LSM6P62312 EIF2AP4-201ENST00000424793 1781 ntBASIC3.78□□□□□ -1.8
LSM6P62312 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC3.78□□□□□ -1.8
LSM6P62312 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.78□□□□□ -1.8
LSM6P62312 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
LSM6P62312 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
LSM6P62312 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
LSM6P62312 AL137100.1-201ENST00000556703 1620 ntBASIC3.77□□□□□ -1.81
LSM6P62312 AC090229.1-201ENST00000590983 1609 ntBASIC3.77□□□□□ -1.81
LSM6P62312 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
LSM6P62312 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
LSM6P62312 AL139811.1-201ENST00000424779 2299 ntBASIC3.77□□□□□ -1.81
LSM6P62312 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC3.77□□□□□ -1.81
LSM6P62312 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
LSM6P62312 AC103591.2-201ENST00000265259 766 ntBASIC3.77□□□□□ -1.81
LSM6P62312 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
LSM6P62312 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
LSM6P62312 RNU6-697P-201ENST00000363348 107 ntBASIC3.77□□□□□ -1.81
LSM6P62312 RNA5SP505-201ENST00000364748 108 ntBASIC3.77□□□□□ -1.81
LSM6P62312 RNA5SP332-201ENST00000391063 115 ntBASIC3.77□□□□□ -1.81
LSM6P62312 CCL7-202ENST00000394627 696 ntTSL 3 BASIC3.77□□□□□ -1.81
LSM6P62312 AL607077.1-201ENST00000401718 499 ntBASIC3.77□□□□□ -1.81
LSM6P62312 MIR1179-201ENST00000408703 91 ntBASIC3.77□□□□□ -1.81
LSM6P62312 RPL31-204ENST00000409038 817 ntTSL 2 BASIC3.77□□□□□ -1.81
LSM6P62312 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC3.77□□□□□ -1.81
LSM6P62312 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC3.77□□□□□ -1.81
LSM6P62312 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.77□□□□□ -1.81
LSM6P62312 DNAJA1P1-201ENST00000425106 1187 ntBASIC3.77□□□□□ -1.81
LSM6P62312 FTH1P16-201ENST00000435241 552 ntBASIC3.77□□□□□ -1.81
LSM6P62312 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.77□□□□□ -1.81
LSM6P62312 AC239809.1-201ENST00000450470 217 ntBASIC3.77□□□□□ -1.81
LSM6P62312 RPL7P32-201ENST00000457119 744 ntBASIC3.77□□□□□ -1.81
LSM6P62312 RPS20P4-201ENST00000461659 355 ntBASIC3.77□□□□□ -1.81
LSM6P62312 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC3.77□□□□□ -1.81
LSM6P62312 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC3.77□□□□□ -1.81
LSM6P62312 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
LSM6P62312 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC3.77□□□□□ -1.81
LSM6P62312 OR5AN2P-201ENST00000534535 896 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms